euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

164 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip43 chr1 12875658 12875658 - unknown germline validated no 600 .
srip561 chr1 42484031 42484031 + unknown germline validated no 600 HIVEP3
srip1691 chr1 75192755 75192755 - unknown germline validated no 600 CRYZ
srip3613 chr1 113889049 113889049 + unknown germline validated no 600 .
srip3731 chr1 118829527 118829527 + unknown germline validated no 600 .
srip3911 chr1 119553576 119553576 + unknown germline validated no 600 .
srip4144 chr1 149308656 149308656 + unknown germline validated no 600 LOC645262
srip4506 chr1 159574406 159574406 + unknown germline validated no 600 .
srip6957 chr1 223341471 223341471 + unknown germline validated no 600 .
srip8677 chr10 31737633 31737633 - unknown germline validated no 600 ZEB1
srip8851 chr10 44607613 44607613 - unknown germline validated no 600 .
srip8936 chr10 58207486 58207486 - unknown germline validated no 600 .
srip10819 chr10 108614152 108614152 - unknown germline validated no 600 SORCS1
srip11869 chr10 124455307 124455307 + unknown germline validated no 600 .
srip14852 chr11 48756138 48756138 + unknown germline validated no 600 .
srip17242 chr11 94684521 94684521 + unknown germline validated no 600 .
srip17493 chr11 104555983 104555983 - unknown germline validated no 600 .
srip17863 chr11 110377654 110377654 - unknown germline validated no 600 .
srip18660 chr11 134305342 134305342 - unknown germline validated no 600 .
srip19928 chr12 12933562 12933562 - unknown germline validated no 600 APOLD1
srip20508 chr12 28226261 28226261 - unknown germline validated no 600 .
srip21766 chr12 39591227 39591227 - unknown germline validated no 600 .
srip21968 chr12 43256779 43256779 - unknown germline validated no 600 .
srip22797 chr12 48719101 48719101 - unknown germline validated no 600 .
srip22919 chr12 55604811 55604811 + unknown germline validated no 600 .
srip22959 chr12 55782233 55782233 + unknown germline validated no 600 OR6C66P
srip23536 chr12 73789278 73789278 + unknown germline validated no 600 .
srip26091 chr12 118187092 118187092 + unknown germline validated no 600 KSR2
srip26146 chr12 126802505 126802505 - unknown germline validated no 600 .
srip26687 chr13 19078303 19078303 + unknown germline validated no 600 .
srip27495 chr13 27488225 27488225 + unknown germline validated no 600 .
srip28676 chr13 61462127 61462127 - unknown germline validated no 600 .
srip29664 chr13 61734770 61734770 + unknown germline validated no 600 .
srip29795 chr13 65548932 65548932 - unknown germline validated no 600 .
srip30605 chr13 78055230 78055230 + unknown germline validated no 600 .
srip31210 chr13 85871524 85871524 - unknown germline validated no 600 .
srip35530 chr14 34139944 34139944 - unknown germline validated no 600 NPAS3
srip36060 chr14 36675085 36675085 + unknown germline validated no 600 .
srip37668 chr14 66498421 66498421 - unknown germline validated no 600 .
srip40341 chr15 48184871 48184871 - unknown germline validated no 600 .
srip42279 chr15 83551474 83551474 - unknown germline validated no 600 HOMER2
srip43070 chr15 100931075 100931075 - unknown germline validated no 600 .
srip44072 chr16 17754965 17754965 - unknown germline validated no 600 .
srip47905 chr17 34272245 34272245 + unknown germline validated no 600 .
srip49818 chr18 45164388 45164388 + unknown germline validated no 600 .
srip50115 chr18 50097664 50097664 - unknown germline validated no 600 DCC
srip50430 chr18 51762503 51762503 - unknown germline validated no 600 .
srip52912 chr2 13183466 13183466 + unknown germline validated no 600 .
srip53185 chr2 23190788 23190788 - unknown germline validated no 600 .
srip53619 chr2 23960294 23960294 + unknown germline validated no 600 .
srip54659 chr2 42051611 42051611 + unknown germline validated no 600 .
srip54983 chr2 56784122 56784122 - unknown germline validated no 600 .
srip55193 chr2 66859887 66859887 - unknown germline validated no 600 .
srip55235 chr2 69168644 69168644 - unknown germline validated no 600 .
srip55694 chr2 76578038 76578038 - unknown germline validated no 600 .
srip55818 chr2 79929635 79929635 + unknown germline validated no 600 CTNNA2
srip56265 chr2 82098187 82098187 + unknown germline validated no 600 .
srip56595 chr2 91640356 91640356 + unknown germline validated no 600 .
srip56776 chr2 103495864 103495864 - unknown germline validated no 600 .
srip57289 chr2 113267431 113267431 - unknown germline validated no 600 TTL
srip57873 chr2 134668741 134668741 + unknown germline validated no 600 .
srip58389 chr2 143285340 143285340 + unknown germline validated no 600 .
srip59232 chr2 147021176 147021176 + unknown germline validated no 600 .
srip60545 chr2 181000894 181000894 + unknown germline validated no 600 .
srip60673 chr2 183551792 183551792 + unknown germline validated no 600 .
srip60891 chr2 195937538 195937538 - unknown germline validated no 600 .
srip61033 chr2 199295720 199295720 - unknown germline validated no 600 .
srip61979 chr2 221503311 221503311 - unknown germline validated no 600 .
srip63119 chr20 9477795 9477795 - unknown germline validated no 600 .
srip64515 chr20 29921155 29921155 + unknown germline validated no 600 .
srip66623 chr21 29069129 29069129 - unknown germline validated no 600 .
srip67166 chr22 17247723 17247723 + unknown germline validated no 600 .
srip67874 chr22 22715839 22715839 + unknown germline validated no 600 IGL@
srip69621 chr3 656199 656199 - unknown germline validated no 600 .
srip71425 chr3 35496973 35496973 + unknown germline validated no 600 .
srip73445 chr3 59853016 59853016 + unknown germline validated no 600 FHIT
srip73546 chr3 70499460 70499460 - unknown germline validated no 600 .
srip73883 chr3 75101444 75101444 + unknown germline validated no 600 .
srip75105 chr3 84593013 84593013 - unknown germline validated no 600 .
srip75982 chr3 90485234 90485234 - unknown germline validated no 600 .
srip75999 chr3 95381607 95381607 - unknown germline validated no 600 .
srip76860 chr3 120697810 120697810 - unknown germline validated no 600 STXBP5L
srip77330 chr3 126520683 126520683 + unknown germline validated no 600 CHCHD6
srip77768 chr3 135943949 135943949 + unknown germline validated no 600 .
srip77899 chr3 139044488 139044488 + unknown germline validated no 600 .
srip78206 chr3 144609876 144609876 - unknown germline validated no 600 .
srip79670 chr3 167729512 167729512 + unknown germline validated no 600 GOLIM4
srip80079 chr3 175677816 175677816 - unknown germline validated no 600 .
srip80428 chr3 176091566 176091566 + unknown germline validated no 600 .
srip80888 chr3 181193308 181193308 + unknown germline validated no 600 .
srip81549 chr3 186372285 186372285 + unknown germline validated no 600 .
srip81556 chr3 187835042 187835042 - unknown germline validated no 600 .
srip82461 chr4 14214095 14214095 - unknown germline validated no 600 .
srip82604 chr4 14849344 14849344 + unknown germline validated no 600 .
srip82754 chr4 18162297 18162297 - unknown germline validated no 600 .
srip84640 chr4 47007730 47007730 - unknown germline validated no 600 .
srip85283 chr4 57496822 57496822 - unknown germline validated no 600 .
srip88911 chr4 103343890 103343890 + unknown germline validated no 600 .
srip90884 chr4 123495755 123495755 - unknown germline validated no 600 .
srip92259 chr4 134596743 134596743 + unknown germline validated no 600 .
srip92350 chr4 137767100 137767100 - unknown germline validated no 600 .
srip92832 chr4 138177642 138177642 + unknown germline validated no 600 .
srip93136 chr4 147225447 147225447 + unknown germline validated no 600 SLC10A7
srip93245 chr4 150278381 150278381 + unknown germline validated no 600 .
srip94432 chr4 170281747 170281747 - unknown germline validated no 600 .
srip95154 chr4 188783306 188783306 - unknown germline validated no 600 .
srip96091 chr5 8749690 8749690 + unknown germline validated no 600 .
srip96376 chr5 11391312 11391312 + unknown germline validated no 600 CTNND2
srip97240 chr5 26093283 26093283 + unknown germline validated no 600 .
srip98213 chr5 40041067 40041067 - unknown germline validated no 600 .
srip98426 chr5 44014416 44014416 + unknown germline validated no 600 .
srip98536 chr5 45445651 45445651 + unknown germline validated no 600 HCN1
srip98652 chr5 49470164 49470164 - unknown germline validated no 600 .
srip99120 chr5 57279598 57279598 + unknown germline validated no 600 .
srip99175 chr5 62878134 62878134 + unknown germline validated no 600 .
srip99722 chr5 79198634 79198634 + unknown germline validated no 600 .
srip99775 chr5 84239400 84239400 - unknown germline validated no 600 .
srip100807 chr5 89450921 89450921 + unknown germline validated no 600 .
srip101241 chr5 98680709 98680709 - unknown germline validated no 600 .
srip101247 chr5 98899039 98899039 - unknown germline validated no 600 .
srip102546 chr5 109567634 109567634 + unknown germline validated no 600 .
srip105270 chr5 155620044 155620044 + unknown germline validated no 600 .
srip105745 chr5 161463222 161463222 - unknown germline validated no 600 .
srip108731 chr6 46310371 46310371 + unknown germline validated no 600 .
srip110169 chr6 71980803 71980803 + unknown germline validated no 600 .
srip110443 chr6 74935388 74935388 - unknown germline validated no 600 .
srip110700 chr6 77980581 77980581 - unknown germline validated no 600 .
srip111190 chr6 78445820 78445820 - unknown germline validated no 600 .
srip113281 chr6 123853709 123853709 - unknown germline validated no 600 TRDN
srip113635 chr6 142291365 142291365 + unknown germline validated no 600 .
srip114268 chr6 148121496 148121496 - unknown germline validated no 600 .
srip114786 chr6 148195839 148195839 + unknown germline validated no 600 .
srip114918 chr6 155667625 155667625 - unknown germline validated no 600 .
srip114962 chr6 157968349 157968349 - unknown germline validated no 600 ZDHHC14
srip115711 chr6 162181442 162181442 + unknown germline validated no 600 PARK2
srip117513 chr7 53652387 53652387 - unknown germline validated no 600 .
srip118660 chr7 70188485 70188485 - unknown germline validated no 600 AUTS2
srip119441 chr7 84901336 84901336 - unknown germline validated no 600 .
srip120708 chr7 93146458 93146458 - unknown germline validated no 600 CALCR
srip123780 chr8 1123259 1123259 - unknown germline validated no 600 .
srip124102 chr8 5829127 5829127 - unknown germline validated no 600 .
srip125701 chr8 36270879 36270879 - unknown germline validated no 600 .
srip126620 chr8 67381725 67381725 - unknown germline validated no 600 .
srip128546 chr8 98540858 98540858 - unknown germline validated no 600 .
srip129498 chr8 115881819 115881819 + unknown germline validated no 600 .
srip130197 chr8 131041330 131041330 + unknown germline validated no 600 .
srip130488 chr9 235571 235571 - unknown germline validated no 600 DOCK8
srip131152 chr9 6290848 6290848 + unknown germline validated no 600 .
srip131599 chr9 9236751 9236751 + unknown germline validated no 600 PTPRD
srip131727 chr9 18649955 18649955 - unknown germline validated no 600 ADAMTSL1
srip131936 chr9 28990487 28990487 + unknown germline validated no 600 .
srip132760 chr9 32092619 32092619 - unknown germline validated no 600 .
srip132945 chr9 32463715 32463715 - unknown germline validated no 600 DDX58
srip134535 chr9 95667622 95667622 - unknown germline validated no 600 .
srip135099 chr9 105073781 105073781 + unknown germline validated no 600 .
srip136108 chr9 125419620 125419620 + unknown germline validated no 600 .
srip136989 chrX 47111186 47111186 - unknown germline validated no 600 .
srip137971 chrX 63059211 63059211 + unknown germline validated no 600 .
srip138425 chrX 69859597 69859597 + unknown germline validated no 600 TEX11
srip139063 chrX 75949898 75949898 + unknown germline validated no 600 .
srip139555 chrX 95853013 95853013 + unknown germline validated no 600 .
srip141043 chrX 122664526 122664526 - unknown germline validated no 600 .
srip142034 chrX 143704826 143704826 + unknown germline validated no 600 .
srip142437 chrY 19097610 19097610 + unknown germline validated no 600 .