euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip146 chr1 24775512 24775512 + unknown germline validated no 592 NIPAL3
srip1966 chr1 79023145 79023145 + unknown germline validated no 592 .
srip2066 chr1 83609125 83609125 - unknown germline validated no 592 .
srip2894 chr1 102545056 102545056 - unknown germline validated no 592 .
srip3091 chr1 102569114 102569114 + unknown germline validated no 592 .
srip3648 chr1 114976882 114976882 - unknown germline validated no 592 TRIM33
srip4166 chr1 152443698 152443698 - unknown germline validated no 592 .
srip4646 chr1 165531706 165531706 - unknown germline validated no 592 LRRC52;LOC400794
srip5275 chr1 179575197 179575197 - unknown germline validated no 592 TDRD5
srip5859 chr1 192262162 192262162 - unknown germline validated no 592 .
srip7432 chr1 242496596 242496596 + unknown germline validated no 592 PLD5
srip7806 chr10 19065550 19065550 - unknown germline validated no 592 .
srip10479 chr10 91717532 91717532 - unknown germline validated no 592 .
srip11244 chr10 110453931 110453931 + unknown germline validated no 592 .
srip11993 chr10 133016641 133016641 - unknown germline validated no 592 TCERG1L
srip12009 chr10 133528481 133528481 - unknown germline validated no 592 .
srip12574 chr11 15380364 15380364 + unknown germline validated no 592 .
srip12659 chr11 19652293 19652293 - unknown germline validated no 592 NAV2
srip12965 chr11 26159927 26159927 - unknown germline validated no 592 .
srip13285 chr11 30180703 30180703 + unknown germline validated no 592 .
srip13933 chr11 37811369 37811369 + unknown germline validated no 592 .
srip15882 chr11 67599491 67599491 + unknown germline validated no 592 LOC100421859
srip15898 chr11 67777074 67777074 - unknown germline validated no 592 ALDH3B1
srip16490 chr11 83652293 83652293 - unknown germline validated no 592 DLG2
srip16829 chr11 91203062 91203062 - unknown germline validated no 592 .
srip17822 chr11 105479182 105479182 + unknown germline validated no 592 .
srip18295 chr11 114895734 114895734 + unknown germline validated no 592 .
srip18536 chr11 123241906 123241906 + unknown germline validated no 592 .
srip20436 chr12 25775766 25775766 - unknown germline validated no 592 IFLTD1
srip21125 chr12 34017161 34017161 - unknown germline validated no 592 .
srip21944 chr12 42637062 42637062 + unknown germline validated no 592 .
srip22847 chr12 48929157 48929157 + unknown germline validated no 592 .
srip24666 chr12 84965334 84965334 + unknown germline validated no 592 .
srip24940 chr12 85506395 85506395 + unknown germline validated no 592 LRRIQ1
srip25423 chr12 117814367 117814367 - unknown germline validated no 592 .
srip28032 chr13 42771428 42771428 + unknown germline validated no 592 DGKH
srip28509 chr13 61221023 61221023 - unknown germline validated no 592 .
srip35399 chr14 31150525 31150525 - unknown germline validated no 592 SCFD1
srip37078 chr14 51311482 51311482 - unknown germline validated no 592 .
srip37373 chr14 59220500 59220500 + unknown germline validated no 592 .
srip37694 chr14 67419610 67419610 - unknown germline validated no 592 GPHN
srip37965 chr14 68784350 68784350 + unknown germline validated no 592 RAD51B
srip38176 chr14 71197806 71197806 + unknown germline validated no 592 MAP3K9
srip38199 chr14 72333521 72333521 - unknown germline validated no 592 .
srip38431 chr14 86307570 86307570 + unknown germline validated no 592 .
srip38453 chr14 86381662 86381662 - unknown germline validated no 592 .
srip38845 chr14 90497183 90497183 - unknown germline validated no 592 TDP1
srip39117 chr15 25253952 25253952 - unknown germline validated no 592 SNRPN
srip39144 chr15 27875825 27875825 + unknown germline validated no 592 .
srip39595 chr15 35654003 35654003 - unknown germline validated no 592 .
srip39640 chr15 37707731 37707731 - unknown germline validated no 592 .
srip39916 chr15 45567581 45567581 - unknown germline validated no 592 SLC28A2
srip40700 chr15 51189570 51189570 + unknown germline validated no 592 .
srip40748 chr15 51843910 51843910 + unknown germline validated no 592 DMXL2
srip40971 chr15 53956368 53956368 + unknown germline validated no 592 WDR72
srip41270 chr15 56251651 56251651 + unknown germline validated no 592 NEDD4
srip41526 chr15 61328808 61328808 - unknown germline validated no 592 RORA
srip42635 chr15 85649502 85649502 + unknown germline validated no 592 PDE8A
srip43470 chr16 5338879 5338879 + unknown germline validated no 592 .
srip44051 chr16 16934247 16934247 - unknown germline validated no 592 .
srip44454 chr16 22945701 22945701 - unknown germline validated no 592 .
srip44800 chr16 32525376 32525376 - unknown germline validated no 592 .
srip45724 chr16 55292232 55292232 + unknown germline validated no 592 .
srip46482 chr16 89978226 89978226 + unknown germline validated no 592 .
srip47389 chr17 28398481 28398481 + unknown germline validated no 592 EFCAB5
srip47727 chr17 32813910 32813910 + unknown germline validated no 592 .
srip48107 chr17 64551116 64551116 - unknown germline validated no 592 PRKCA
srip48463 chr17 68357562 68357562 + unknown germline validated no 592 .
srip49869 chr18 49216083 49216083 - unknown germline validated no 592 .
srip51019 chr18 59579982 59579982 + unknown germline validated no 592 .
srip51420 chr18 69617399 69617399 + unknown germline validated no 592 .
srip52181 chr19 24602154 24602154 - unknown germline validated no 592 .
srip53173 chr2 22706685 22706685 + unknown germline validated no 592 .
srip53968 chr2 35879443 35879443 + unknown germline validated no 592 .
srip54957 chr2 53460161 53460161 + unknown germline validated no 592 .
srip56636 chr2 92306795 92306795 + unknown germline validated no 592 .
srip56658 chr2 92319432 92319432 - unknown germline validated no 592 .
srip56692 chr2 92324483 92324483 - unknown germline validated no 592 .
srip56799 chr2 106151450 106151450 - unknown germline validated no 592 .
srip56922 chr2 106163220 106163220 + unknown germline validated no 592 .
srip58404 chr2 143370703 143370703 - unknown germline validated no 592 .
srip58596 chr2 144010847 144010847 + unknown germline validated no 592 ARHGAP15
srip59726 chr2 168735299 168735299 - unknown germline validated no 592 .
srip61647 chr2 212707721 212707721 + unknown germline validated no 592 ERBB4
srip62380 chr2 230341968 230341968 + unknown germline validated no 592 DNER
srip62656 chr2 235519844 235519844 + unknown germline validated no 592 .
srip62755 chr20 6105791 6105791 - unknown germline validated no 592 .
srip63340 chr20 16479373 16479373 - unknown germline validated no 592 KIF16B
srip64151 chr20 29591676 29591676 + unknown germline validated no 592 .
srip64613 chr20 41951972 41951972 - unknown germline validated no 592 .
srip65651 chr21 19517214 19517214 - unknown germline validated no 592 .
srip67158 chr22 17246312 17246312 + unknown germline validated no 592 .
srip67258 chr22 19210951 19210951 + unknown germline validated no 592 CLTCL1
srip68596 chr22 44324380 44324380 - unknown germline validated no 592 PNPLA3
srip69833 chr3 3408404 3408404 + unknown germline validated no 592 .
srip70567 chr3 21235006 21235006 + unknown germline validated no 592 .
srip70657 chr3 22440113 22440113 + unknown germline validated no 592 .
srip71950 chr3 38626129 38626129 + unknown germline validated no 592 SCN5A
srip72061 chr3 44300491 44300491 - unknown germline validated no 592 C3orf77
srip72845 chr3 58783947 58783947 + unknown germline validated no 592 C3orf67
srip73503 chr3 65685575 65685575 + unknown germline validated no 592 MAGI1
srip73898 chr3 75670011 75670011 - unknown germline validated no 592 UNC93B3
srip73914 chr3 75691138 75691138 - unknown germline validated no 592 .
srip74066 chr3 79216420 79216420 + unknown germline validated no 592 ROBO1
srip74638 chr3 81990731 81990731 - unknown germline validated no 592 .
srip75633 chr3 85576631 85576631 + unknown germline validated no 592 CADM2
srip75973 chr3 90456520 90456520 - unknown germline validated no 592 .
srip76923 chr3 123033794 123033794 + unknown germline validated no 592 ADCY5
srip77308 chr3 123590896 123590896 + unknown germline validated no 592 MYLK
srip77517 chr3 131069981 131069981 + unknown germline validated no 592 LOC339874
srip78095 chr3 143121667 143121667 - unknown germline validated no 592 SLC9A9
srip78350 chr3 150210561 150210561 - unknown germline validated no 592 .
srip79293 chr3 161145847 161145847 + unknown germline validated no 592 RPL23AP42
srip79903 chr3 169270360 169270360 + unknown germline validated no 592 MECOM
srip81853 chr3 193354030 193354030 - unknown germline validated no 592 OPA1
srip83869 chr4 29322214 29322214 + unknown germline validated no 592 .
srip85486 chr4 58126491 58126491 - unknown germline validated no 592 .
srip85641 chr4 58917248 58917248 - unknown germline validated no 592 .
srip87055 chr4 71093393 71093393 + unknown germline validated no 592 C4orf7
srip87404 chr4 80768650 80768650 + unknown germline validated no 592 GDEP
srip89041 chr4 104214774 104214774 + unknown germline validated no 592 .
srip90369 chr4 115132827 115132827 + unknown germline validated no 592 .
srip91196 chr4 128965197 128965197 - unknown germline validated no 592 .
srip91527 chr4 132181331 132181331 - unknown germline validated no 592 .
srip93298 chr4 151582619 151582619 + unknown germline validated no 592 LRBA
srip93339 chr4 152732601 152732601 - unknown germline validated no 592 .
srip95409 chr4 190659942 190659942 + unknown germline validated no 592 .
srip96106 chr5 9055982 9055982 + unknown germline validated no 592 SEMA5A
srip96826 chr5 20458616 20458616 + unknown germline validated no 592 .
srip97004 chr5 23070279 23070279 + unknown germline validated no 592 .
srip97986 chr5 33797341 33797341 - unknown germline validated no 592 ADAMTS12
srip98407 chr5 41602121 41602121 + unknown germline validated no 592 .
srip99134 chr5 57428108 57428108 + unknown germline validated no 592 .
srip99158 chr5 59591041 59591041 + unknown germline validated no 592 PDE4D
srip99335 chr5 67721751 67721751 + unknown germline validated no 592 .
srip99627 chr5 68618005 68618005 - unknown germline validated no 592 .
srip102663 chr5 112449536 112449536 - unknown germline validated no 592 MCC
srip102911 chr5 124155264 124155264 - unknown germline validated no 592 .
srip103395 chr5 125040179 125040179 + unknown germline validated no 592 .
srip103573 chr5 132934117 132934117 + unknown germline validated no 592 FSTL4
srip104030 chr5 144233373 144233373 - unknown germline validated no 592 .
srip104047 chr5 144330739 144330739 - unknown germline validated no 592 .
srip104880 chr5 155333706 155333706 - unknown germline validated no 592 .
srip105303 chr5 157867170 157867170 - unknown germline validated no 592 .
srip105511 chr5 159351006 159351006 - unknown germline validated no 592 ADRA1B
srip106910 chr6 13135020 13135020 + unknown germline validated no 592 PHACTR1
srip107586 chr6 13503253 13503253 + unknown germline validated no 592 .
srip107653 chr6 18227737 18227737 + unknown germline validated no 592 DEK
srip108153 chr6 36498040 36498040 + unknown germline validated no 592 STK38
srip108364 chr6 45934271 45934271 + unknown germline validated no 592 CLIC5
srip108833 chr6 53285027 53285027 + unknown germline validated no 592 .
srip108972 chr6 56758359 56758359 - unknown germline validated no 592 LOC100652827
srip110345 chr6 73716580 73716580 + unknown germline validated no 592 KCNQ5
srip110583 chr6 77379855 77379855 - unknown germline validated no 592 .
srip111326 chr6 83678042 83678042 - unknown germline validated no 592 UBE2CBP
srip112861 chr6 108786737 108786737 - unknown germline validated no 592 LACE1
srip113444 chr6 125692148 125692148 - unknown germline validated no 592 .
srip113649 chr6 142449929 142449929 - unknown germline validated no 592 .
srip116446 chr7 22783334 22783334 + unknown germline validated no 592 .
srip116509 chr7 25081285 25081285 - unknown germline validated no 592 .
srip116617 chr7 26794974 26794974 + unknown germline validated no 592 SKAP2
srip116803 chr7 34440719 34440719 + unknown germline validated no 592 AAA1
srip118014 chr7 62178856 62178856 + unknown germline validated no 592 .
srip118364 chr7 66590847 66590847 - unknown germline validated no 592 TYW1
srip120402 chr7 88003097 88003097 - unknown germline validated no 592 .
srip121156 chr7 105968058 105968058 + unknown germline validated no 592 .
srip122654 chr7 122124598 122124598 + unknown germline validated no 592 CADPS2
srip123496 chr7 145115410 145115410 - unknown germline validated no 592 .
srip123741 chr7 155158659 155158659 - unknown germline validated no 592 .
srip124846 chr8 11731373 11731373 + unknown germline validated no 592 .
srip124974 chr8 18455923 18455923 + unknown germline validated yes 592 PSD3
srip125274 chr8 24926274 24926274 - unknown germline validated no 592 .
srip125733 chr8 40432892 40432892 - unknown germline validated no 592 ZMAT4
srip125840 chr8 43784668 43784668 + unknown germline validated no 592 .
srip126423 chr8 58348186 58348186 + unknown germline validated no 592 .
srip127031 chr8 72399104 72399104 - unknown germline validated no 592 .
srip128044 chr8 83740734 83740734 + unknown germline validated no 592 .
srip128204 chr8 85428807 85428807 + unknown germline validated no 592 RALYL
srip128866 chr8 112121121 112121121 - unknown germline validated no 592 .
srip129033 chr8 115788352 115788352 - unknown germline validated no 592 .
srip130583 chr9 4265600 4265600 + unknown germline validated no 592 GLIS3
srip131171 chr9 7327229 7327229 - unknown germline validated no 592 .
srip131188 chr9 7426706 7426706 - unknown germline validated no 592 .
srip133896 chr9 70999188 70999188 + unknown germline validated no 592 PGM5
srip134167 chr9 82082611 82082611 - unknown germline validated no 592 .
srip135475 chr9 110018307 110018307 - unknown germline validated no 592 .
srip135606 chr9 111565179 111565179 + unknown germline validated no 592 .
srip136202 chrX 3878925 3878925 - unknown germline validated no 592 .
srip136377 chrX 11953283 11953283 - unknown germline validated yes 592 .
srip136399 chrX 14151668 14151668 - unknown germline validated no 592 .
srip136612 chrX 21300794 21300794 + unknown germline validated no 592 .
srip137370 chrX 55584934 55584934 - unknown germline validated no 592 .
srip137813 chrX 61870985 61870985 + unknown germline validated no 592 .
srip139807 chrX 98920814 98920814 - unknown germline validated no 592 LOC442459
srip140111 chrX 102363307 102363307 + unknown germline validated no 592 .
srip140321 chrX 111557667 111557667 - unknown germline validated no 592 ZCCHC16
srip140662 chrX 119892535 119892535 - unknown germline validated no 592 .
srip141177 chrX 124637032 124637032 - unknown germline validated no 592 .
srip141213 chrX 129525062 129525062 - unknown germline validated no 592 .
srip141585 chrX 136180970 136180970 - unknown germline validated no 592 .
srip142298 chrY 13490753 13490753 + unknown germline validated no 592 .
srip142346 chrY 13878782 13878782 + unknown germline validated no 592 .
srip142490 chrY 58980643 58980643 - unknown germline validated no 592 .