euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

8 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip11927 chr10 129635697 129635920 . unknown somatic validated no 627 .
srip20344 chr12 19089531 19089844 . unknown somatic validated no 627 .
srip28495 chr13 60286691 60286840 . unknown somatic validated no 627 DIAPH3
srip38917 chr14 97502044 97502209 . unknown somatic validated no 627 .
srip57993 chr2 141259004 141259207 . unknown somatic validated no 627 LRP1B
srip92274 chr4 135744849 135744952 . unknown somatic validated no 627 .
srip117503 chr7 52992212 52992444 . unknown somatic validated no 627 .
srip136593 chrX 18785220 18785559 . unknown somatic validated no 627 PPEF1