euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

9 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip11342 chr10 113083563 113083850 . unknown somatic validated no 625 .
srip12665 chr11 20432486 20432595 . unknown somatic validated no 625 PRMT3
srip16816 chr11 91088780 91088974 . unknown somatic validated no 625 .
srip48746 chr18 8036042 8036301 . unknown somatic validated no 625 PTPRM
srip63097 chr20 7338001 7338104 . unknown somatic validated no 625 .
srip80070 chr3 174281695 174281935 . unknown somatic validated no 625 .
srip100123 chr5 86880780 86880951 . unknown somatic validated no 625 .
srip136753 chrX 22826874 22827066 . unknown somatic validated no 625 .
srip139817 chrX 101106095 101106480 . unknown somatic validated no 625 NXF5