euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

28 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip5043 chr1 169524859 169524859 + L1-Ta germline . no 168 F5
srip8439 chr10 25707687 25707687 - L1-Ta germline . no 168 GPR158
srip29063 chr13 61462336 61462336 - L1-Ta germline . no 168 .
srip29635 chr13 61734485 61734485 + L1-Ta germline . no 168 .
srip30647 chr13 78693222 78693222 + L1-Ta germline . no 168 .
srip31446 chr13 85871602 85871602 - L1-Ta germline . no 168 .
srip37360 chr14 59220402 59220402 + L1-Ta germline . no 168 .
srip37865 chr14 67419864 67419864 - L1-Ta germline . no 168 GPHN
srip52814 chr2 7050603 7050603 + L1-Ta germline . no 168 .
srip54233 chr2 36570243 36570243 - L1-Ta germline . no 168 .
srip63451 chr20 16479495 16479495 - L1-Ta germline . no 168 KIF16B
srip66049 chr21 19517313 19517313 - L1-Ta germline . no 168 .
srip67864 chr22 22715602 22715602 + L1-Ta germline . no 168 IGL@
srip74852 chr3 82144854 82144854 - L1-Ta germline . no 168 .
srip75620 chr3 85576568 85576568 + L1-Ta germline . no 168 CADM2
srip80420 chr3 176091333 176091333 + L1-Ta germline . no 168 .
srip82409 chr4 10632679 10632679 - L1-Ta germline . no 168 CLNK
srip92792 chr4 138177325 138177325 + L1-Ta germline . no 168 .
srip102275 chr5 109480258 109480258 - L1-Ta germline . no 168 .
srip107567 chr6 13503049 13503049 + L1-Ta germline . no 168 .
srip113790 chr6 142450101 142450101 - L1-Ta germline . no 168 .
srip121806 chr7 107829263 107829263 + L1-Ta germline . no 168 NRCAM
srip122258 chr7 110484749 110484749 + L1-Ta germline . no 168 IMMP2L
srip127577 chr8 75723722 75723722 + L1-Ta germline . no 168 .
srip128085 chr8 84573987 84573987 + L1-Ta germline . no 168 .
srip128257 chr8 87315040 87315040 + L1-Ta germline . no 168 .
srip133465 chr9 32463895 32463895 - L1-Ta germline . no 168 DDX58
srip133699 chr9 35883708 35883708 + L1-Ta germline . no 168 .