euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

204 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip96 chr1 17229479 17229479 - L1-Ta germline . no 208 .
srip521 chr1 42483961 42483961 + L1-Ta germline . no 208 HIVEP3
srip856 chr1 56405398 56405398 - L1-Ta germline . no 208 LOC100507652
srip2017 chr1 81855783 81855783 + L1-Ta germline . no 208 .
srip3892 chr1 119553352 119553352 + L1-Ta germline . no 208 .
srip4049 chr1 149216797 149216797 + L1-Ta germline . no 208 .
srip4177 chr1 152443898 152443898 - L1-Ta germline validated no 208 .
srip5039 chr1 169524859 169524859 + L1-Ta germline . no 208 F5
srip5418 chr1 179575362 179575362 - L1-Ta germline . no 208 TDRD5
srip5552 chr1 183969672 183969672 - L1-Ta germline . no 208 GLT25D2
srip5801 chr1 190973018 190973018 - L1-Ta germline . no 208 .
srip6280 chr1 194934648 194934648 - L1-Ta germline validated no 208 .
srip6381 chr1 207579511 207579511 + L1-Ta germline . no 208 .
srip7411 chr1 242311577 242311577 + L1-Ta germline validated no 208 PLD5
srip8653 chr10 27775762 27775762 + L1-Ta germline . no 208 .
srip9697 chr10 74767506 74767506 - L1-Ta germline . no 208 P4HA1
srip11214 chr10 110453470 110453470 + L1-Ta germline . no 208 .
srip12873 chr11 25123354 25123354 - L1-Ta germline . no 208 .
srip13800 chr11 33670123 33670123 + L1-Ta germline . no 208 C11orf41
srip13856 chr11 36558472 36558472 - L1-Ta germline . no 208 .
srip14372 chr11 41831811 41831811 - L1-Ta germline . no 208 .
srip14773 chr11 48360753 48360753 - L1-Ta germline . no 208 .
srip17346 chr11 97434311 97434311 - L1-Ta germline . no 208 .
srip17442 chr11 99502903 99502903 + L1-Ta germline . no 208 CNTN5
srip17774 chr11 104556130 104556130 - L1-Ta germline . no 208 .
srip19331 chr11 134305648 134305648 - L1-Ta germline . no 208 .
srip20726 chr12 28226413 28226413 - L1-Ta germline . no 208 .
srip20875 chr12 31353751 31353751 - L1-pre-Ta germline . no 208 OVOS2
srip21912 chr12 42215623 42215623 - L1-Ta germline . no 208 .
srip22267 chr12 43256986 43256986 - L1-Ta germline . no 208 .
srip22824 chr12 48929052 48929052 + L1-Ta germline . no 208 .
srip24650 chr12 84965148 84965148 + L1-Ta germline . no 208 .
srip25147 chr12 95808527 95808527 - L1-Ta germline . no 208 .
srip25321 chr12 99925317 99925317 + L1-Ta germline . no 208 ANKS1B
srip26013 chr12 118186926 118186926 + L1-Ta germline . no 208 KSR2
srip26639 chr12 127585804 127585804 - L1-Ta germline . no 208 .
srip27019 chr13 22489805 22489805 + L1-Ta germline . no 208 .
srip27490 chr13 27488126 27488126 + L1-Ta germline . no 208 .
srip29059 chr13 61462336 61462336 - L1-Ta germline . no 208 .
srip29625 chr13 61734485 61734485 + L1-Ta germline . no 208 .
srip30394 chr13 72968682 72968682 + L1-Ta germline . no 208 .
srip31035 chr13 79259793 79259793 - L1-Ta germline . no 208 .
srip31440 chr13 85871602 85871602 - L1-Ta germline . no 208 .
srip33510 chr13 104296223 104296223 - L1-Ta germline . no 208 .
srip33667 chr13 104395943 104395943 - L1-Ta germline . no 208 .
srip33809 chr13 105280146 105280146 - L1-Ta germline . no 208 .
srip34293 chr14 19000969 19000969 + L1-Ta germline . no 208 .
srip35260 chr14 28301261 28301261 + L1-Ta germline . no 208 .
srip35576 chr14 34140125 34140125 - L1-Ta germline . no 208 NPAS3
srip36085 chr14 37769602 37769602 - L1-Ta germline . no 208 MIPOL1
srip36301 chr14 39875084 39875084 + L1-Ta germline . no 208 FBXO33
srip37164 chr14 52667758 52667758 - L1-Ta germline . no 208 .
srip37625 chr14 62809583 62809583 + L1-Ta germline . no 208 .
srip38160 chr14 71197799 71197799 + L1-Ta germline . no 208 MAP3K9
srip38779 chr14 86952513 86952513 - L1-Ta germline . no 208 .
srip39006 chr15 20116653 20116653 + L1-Ta germline . no 208 .
srip39033 chr15 22412531 22412531 - L1-Ta germline . no 208 .
srip39334 chr15 28175791 28175791 - L1-Ta germline . no 208 OCA2
srip39513 chr15 34031839 34031839 - L1-Ta germline . no 208 RYR3
srip43411 chr15 100931161 100931161 - L1-Ta germline . no 208 .
srip43650 chr16 6793831 6793831 + L1-Ta germline . no 208 RBFOX1
srip44085 chr16 17755305 17755305 - L1-Ta germline . no 208 .
srip44787 chr16 32523893 32523893 - L1-Ta germline . no 208 .
srip45072 chr16 32525611 32525611 - L1-Ta germline . no 208 .
srip45493 chr16 33992430 33992430 + L1-Ta germline . no 208 .
srip45528 chr16 34001600 34001600 + L1-Ta germline . no 208 .
srip45887 chr16 61079188 61079188 + L1-Ta germline . no 208 .
srip47372 chr17 28398313 28398313 + L1-Ta germline . no 208 EFCAB5
srip47594 chr17 32813605 32813605 + L1-Ta germline . no 208 .
srip50014 chr18 49216219 49216219 - L1-Ta germline . no 208 .
srip50145 chr18 50097742 50097742 - L1-Ta germline . no 208 DCC
srip50727 chr18 51762730 51762730 - L1-Ta germline . no 208 .
srip51519 chr18 73290637 73290637 - L1-Ta germline . no 208 .
srip52193 chr19 27734292 27734292 - L1-Ta germline . no 208 .
srip52448 chr19 45444699 45444699 + L1-Ta germline . no 208 .
srip53731 chr2 33092028 33092028 - L1-Ta germline . no 208 LINC00486
srip54104 chr2 36381238 36381238 + L1-Ta germline . no 208 .
srip54608 chr2 42051403 42051403 + L1-Ta germline . no 208 .
srip54926 chr2 53460052 53460052 + L1-Ta germline . no 208 .
srip56251 chr2 82098043 82098043 + L1-Ta germline . no 208 .
srip56506 chr2 83188325 83188325 + L1-Ta germline . no 208 .
srip56673 chr2 92319790 92319790 - L1-Ta germline . no 208 .
srip57748 chr2 129573984 129573984 + L1-Ta germline . no 208 .
srip57826 chr2 132868182 132868182 - L1-Ta germline . no 208 .
srip59611 chr2 156527822 156527822 + L1-Ta germline . no 208 .
srip59645 chr2 160318949 160318949 - L1-Ta germline . no 208 LOC100422294;BAZ2B
srip60147 chr2 178676245 178676245 - L1-Ta germline . no 208 PDE11A
srip62358 chr2 230341559 230341559 + L1-Ta germline . no 208 DNER
srip63447 chr20 16479495 16479495 - L1-Ta germline . no 208 KIF16B
srip64806 chr20 41952105 41952105 - L1-Ta germline . no 208 .
srip65339 chr20 60132832 60132832 - L1-Ta germline . no 208 CDH4
srip66044 chr21 19517313 19517313 - L1-Ta germline . no 208 .
srip66272 chr21 23626191 23626191 - L1-Ta germline . no 208 .
srip66557 chr21 26177912 26177912 - L1-Ta germline . no 208 .
srip66882 chr21 29069171 29069171 + L1-Ta germline . no 208 .
srip67451 chr22 22486369 22486369 - L1-Ta germline . no 208 IGL@
srip68906 chr22 44324605 44324605 - L1-Ta germline . no 208 PNPLA3
srip69648 chr3 656435 656435 - L1-Ta germline . no 208 .
srip70086 chr3 17409573 17409573 - L1-Ta germline . no 208 TBC1D5
srip70809 chr3 24987874 24987874 - L1-Ta germline . no 208 .
srip71174 chr3 26524464 26524464 - L1-Ta germline . no 208 .
srip72755 chr3 55788580 55788580 + L1-Ta germline . no 208 ERC2
srip73425 chr3 59852903 59852903 + L1-Ta germline . no 208 FHIT
srip73538 chr3 69181542 69181542 - L1-Ta germline . no 208 .
srip74435 chr3 80590163 80590163 - L1-Ta germline . no 208 .
srip74714 chr3 81990993 81990993 - L1-Ta germline . no 208 .
srip75914 chr3 89022346 89022346 - L1-Ta germline . no 208 .
srip76214 chr3 101279657 101279657 + L1-Ta germline . no 208 .
srip76450 chr3 105316337 105316337 + L1-Ta germline . no 208 .
srip76826 chr3 119046413 119046413 + L1-Ta germline . no 208 ARHGAP31
srip77616 chr3 133911300 133911300 + L1-Ta germline . no 208 RYK
srip78280 chr3 144610072 144610072 - L1-Ta germline . no 208 .
srip78616 chr3 151148544 151148544 - L1-Ta germline . no 208 MED12L
srip80412 chr3 176091333 176091333 + L1-Ta germline . no 208 .
srip80454 chr3 180091672 180091672 + L1-Ta germline . no 208 .
srip81534 chr3 186372141 186372141 + L1-Ta germline . no 208 .
srip81662 chr3 187835309 187835309 - L1-Ta germline . no 208 .
srip82138 chr3 193354175 193354175 - L1-Ta germline . no 208 OPA1
srip83361 chr4 20246382 20246382 + L1-Ta germline . no 208 .
srip83841 chr4 29321851 29321851 + L1-Ta germline . no 208 .
srip84899 chr4 47007790 47007790 - L1-Ta germline . no 208 .
srip86209 chr4 66413932 66413932 + L1-Ta germline . no 208 EPHA5
srip86359 chr4 66809078 66809078 - L1-Ta germline . no 208 .
srip86985 chr4 71093301 71093301 + L1-Ta germline . no 208 C4orf7
srip90003 chr4 112628973 112628973 + L1-Ta germline . no 208 .
srip91303 chr4 130601435 130601435 - L1-Ta germline . no 208 .
srip92226 chr4 134596423 134596423 + L1-Ta germline . no 208 .
srip93127 chr4 147225296 147225296 + L1-Ta germline . no 208 SLC10A7
srip93750 chr4 157447970 157447970 + L1-Ta germline . no 208 .
srip94044 chr4 165231730 165231730 - L1-Ta germline . no 208 MARCH1
srip96062 chr5 8749515 8749515 + L1-Ta germline . no 208 .
srip96792 chr5 16883042 16883042 - L1-Ta germline . no 208 MYO10
srip96918 chr5 21207732 21207732 + L1-Ta germline . no 208 .
srip97973 chr5 33633348 33633348 - L1-Ta germline . no 208 ADAMTS12
srip98614 chr5 46396964 46396964 + L1-Ta germline . no 208 .
srip99114 chr5 57279517 57279517 + L1-Ta germline . no 208 .
srip99769 chr5 83619783 83619783 - L1-Ta germline . no 208 EDIL3
srip100786 chr5 89450781 89450781 + L1-Ta germline . no 208 .
srip101075 chr5 96866407 96866407 + L1-Ta germline . no 208 .
srip102269 chr5 109480258 109480258 - L1-Ta germline . no 208 .
srip102538 chr5 109567542 109567542 + L1-Ta germline . no 208 .
srip102745 chr5 112703081 112703081 + L1-Ta germline validated no 208 MCC
srip103770 chr5 137014775 137014775 - L1-Ta germline . no 208 KLHL3
srip104229 chr5 144331013 144331013 - L1-Ta germline . no 208 .
srip104322 chr5 147263413 147263413 - L1-Ta germline . no 208 .
srip104893 chr5 155333908 155333908 - L1-Ta germline . no 208 .
srip105245 chr5 155619865 155619865 + L1-Ta germline . no 208 .
srip105584 chr5 159351199 159351199 - L1-Ta germline . no 208 ADRA1B
srip107101 chr6 13191033 13191033 + L1-Ta germline . no 208 PHACTR1
srip107561 chr6 13503049 13503049 + L1-Ta germline . no 208 .
srip107597 chr6 16417684 16417684 - L1-Ta germline . no 208 ATXN1
srip107949 chr6 32457289 32457289 + L1-Ta germline . no 208 .
srip108015 chr6 32509106 32509106 - L1-Ta germline . no 208 .
srip108097 chr6 32613444 32613444 + L1-Ta germline . no 208 .
srip108106 chr6 32638838 32638838 - L1-Ta germline . no 208 .
srip108284 chr6 45852697 45852697 - L1-Ta germline . no 208 .
srip108673 chr6 46310291 46310291 + L1-Ta germline . no 208 .
srip109191 chr6 61942547 61942547 - L1-Ta germline . no 208 .
srip109971 chr6 68112755 68112755 - L1-Ta germline . no 208 .
srip111089 chr6 77980650 77980650 - L1-Ta germline . no 208 .
srip111303 chr6 81293578 81293578 - L1-Ta germline . no 208 .
srip111340 chr6 83678129 83678129 - L1-Ta germline . no 208 UBE2CBP
srip112191 chr6 91669521 91669521 - L1-Ta germline . no 208 .
srip112799 chr6 102846086 102846086 - L1-Ta germline . no 208 .
srip113022 chr6 114091140 114091140 + L1-Ta germline . no 208 LOC100652953
srip113782 chr6 142450101 142450101 - L1-Ta germline . no 208 .
srip114739 chr6 148195789 148195789 + L1-Ta germline . no 208 .
srip114895 chr6 154215663 154215663 + L1-Ta germline . no 208 .
srip115088 chr6 157968737 157968737 - L1-Ta germline . no 208 ZDHHC14
srip115563 chr6 162181257 162181257 + L1-Ta germline . no 208 PARK2
srip116417 chr7 20170322 20170322 + L1-Ta germline . no 208 .
srip117081 chr7 45485689 45485689 + L1-Ta germline . no 208 .
srip117495 chr7 52789472 52789472 + L1-Ta germline . no 208 .
srip117975 chr7 61778308 61778308 - L1-Ta germline . no 208 .
srip118877 chr7 70188676 70188676 - L1-Ta germline . no 208 AUTS2
srip119869 chr7 84901724 84901724 - L1-Ta germline . no 208 .
srip120237 chr7 85044737 85044737 + L1-Ta germline . no 208 .
srip121800 chr7 107829263 107829263 + L1-Ta germline . no 208 NRCAM
srip121992 chr7 108325661 108325661 + L1-Ta germline . no 208 .
srip123173 chr7 141480780 141480780 + L1-Ta germline . no 208 .
srip123808 chr8 3278042 3278042 - L1-Ta germline . no 208 CSMD1
srip124050 chr8 4452894 4452894 - L1-Ta germline . no 208 CSMD1
srip124568 chr8 5829283 5829283 - L1-Ta germline . no 208 .
srip125427 chr8 24926545 24926545 - L1-Ta germline . no 208 .
srip126932 chr8 67381885 67381885 - L1-Ta germline . no 208 .
srip128250 chr8 87315040 87315040 + L1-Ta germline . no 208 .
srip128783 chr8 107557032 107557032 - L1-Ta germline . no 208 OXR1
srip130109 chr8 131041219 131041219 + L1-Ta germline . no 208 .
srip131147 chr9 6290494 6290494 + L1-Ta germline . no 208 .
srip131545 chr9 9236600 9236600 + L1-Ta germline . no 208 PTPRD
srip132932 chr9 32092748 32092748 - L1-Ta germline . no 208 .
srip133458 chr9 32463894 32463894 - L1-Ta germline . no 208 DDX58
srip133691 chr9 35883708 35883708 + L1-Ta germline . no 208 .
srip134695 chr9 100675534 100675534 - L1-Ta germline . no 208 C9orf156
srip135048 chr9 105073654 105073654 + L1-Ta germline . no 208 .
srip135997 chr9 118083880 118083880 - L1-Ta germline . no 208 DEC1
srip136166 chr9 136105857 136105857 - L1-Ta germline . no 208 .
srip137343 chrX 55264652 55264652 - L1-Ta germline . no 208 .
srip137593 chrX 55585160 55585160 - L1-Ta germline . no 208 .
srip138343 chrX 66982754 66982754 - L1-Ta germline . no 208 .
srip138420 chrX 68696884 68696884 + L1-Ta germline . no 208 .
srip141085 chrX 122664872 122664872 - L1-Ta germline . no 208 .
srip142178 chrX 154790189 154790189 + L1-Ta germline . no 208 TMLHE
srip142228 chrY 9951878 9951878 - L1-pre-Ta germline . no 208 .