euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

212 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip512 chr1 42483961 42483961 + L1-Ta germline . no 197 HIVEP3
srip848 chr1 56405398 56405398 - L1-Ta germline . no 197 LOC100507652
srip2006 chr1 81855783 81855783 + L1-Ta germline . no 197 .
srip2418 chr1 95729448 95729448 - L1-Ta germline . no 197 .
srip3623 chr1 114046370 114046370 + L1-Ta germline . no 197 MAGI3
srip4016 chr1 145061906 145061906 + L1-Ta germline validated no 197 PDE4DIP
srip4040 chr1 149216797 149216797 + L1-Ta germline . no 197 .
srip4246 chr1 157732949 157732949 + L1-Ta germline . no 197 FCRL2
srip5036 chr1 169524859 169524859 + L1-Ta germline . no 197 F5
srip6015 chr1 192262268 192262268 - L1-Ta germline . no 197 .
srip6274 chr1 194934648 194934648 - L1-Ta germline validated no 197 .
srip6370 chr1 207579511 207579511 + L1-Ta germline . no 197 .
srip6928 chr1 221827821 221827821 - L1-Ta germline . no 197 .
srip7457 chr1 248454039 248454039 - L1-pre-Ta germline . no 197 .
srip8002 chr10 19216652 19216652 + L1-Ta germline . no 197 .
srip8423 chr10 25707687 25707687 - L1-Ta germline . no 197 GPR158
srip9688 chr10 74767506 74767506 - L1-Ta germline . no 197 P4HA1
srip11209 chr10 110453470 110453470 + L1-Ta germline . no 197 .
srip12868 chr11 25123354 25123354 - L1-Ta germline . no 197 .
srip13792 chr11 33670123 33670123 + L1-Ta germline . no 197 C11orf41
srip14363 chr11 41831811 41831811 - L1-Ta germline . no 197 .
srip14561 chr11 43356955 43356955 + L1-Ta germline . no 197 API5
srip14763 chr11 48360753 48360753 - L1-Ta germline . no 197 .
srip15355 chr11 58171838 58171838 + L1-Ta germline . no 197 .
srip15833 chr11 63048427 63048427 + L1-Ta germline . no 197 .
srip17208 chr11 94684368 94684368 + L1-Ta germline . no 197 .
srip17289 chr11 97077820 97077820 - L1-Ta germline . no 197 .
srip17767 chr11 104556130 104556130 - L1-Ta germline . no 197 .
srip19321 chr11 134305648 134305648 - L1-Ta germline . no 197 .
srip20460 chr12 25775841 25775841 - L1-Ta germline . no 197 IFLTD1
srip20717 chr12 28226413 28226413 - L1-Ta germline . no 197 .
srip22260 chr12 43256986 43256986 - L1-Ta germline . no 197 .
srip22979 chr12 60100701 60100701 - L1-Ta germline . no 197 SLC16A7
srip23507 chr12 71020045 71020045 + L1-Ta germline . no 197 PTPRB
srip24915 chr12 85506290 85506290 + L1-Ta germline . no 197 LRRIQ1
srip25027 chr12 92326094 92326094 + L1-Ta germline . no 197 .
srip25136 chr12 95808527 95808527 - L1-Ta germline . no 197 .
srip25336 chr12 102292839 102292839 - L1-Ta germline . no 197 DRAM1
srip26007 chr12 118186926 118186926 + L1-Ta germline . no 197 KSR2
srip29052 chr13 61462336 61462336 - L1-Ta germline . no 197 .
srip29622 chr13 61734485 61734485 + L1-Ta germline . no 197 .
srip29859 chr13 65549225 65549225 - L1-Ta germline . no 197 .
srip30391 chr13 72968682 72968682 + L1-Ta germline . no 197 .
srip30644 chr13 78693222 78693222 + L1-Ta germline . no 197 .
srip31024 chr13 79259793 79259793 - L1-Ta germline . no 197 .
srip31430 chr13 85871602 85871602 - L1-Ta germline . no 197 .
srip32305 chr13 91149409 91149409 - L1-Ta germline . no 197 .
srip32397 chr13 91626223 91626223 + L1-Ta germline . no 197 .
srip33499 chr13 104296223 104296223 - L1-Ta germline . no 197 .
srip33656 chr13 104395943 104395943 - L1-Ta germline . no 197 .
srip33798 chr13 105280146 105280146 - L1-Ta germline . no 197 .
srip34289 chr14 19000969 19000969 + L1-Ta germline . no 197 .
srip34457 chr14 24992912 24992912 - L1-Ta germline . no 197 .
srip35251 chr14 28301261 28301261 + L1-Ta germline . no 197 .
srip35365 chr14 30854668 30854668 + L1-Ta germline . no 197 .
srip35571 chr14 34140125 34140125 - L1-Ta germline . no 197 NPAS3
srip36033 chr14 36674760 36674760 + L1-Ta germline . no 197 .
srip37153 chr14 52667758 52667758 - L1-Ta germline . no 197 .
srip37215 chr14 59160899 59160899 + L1-Ta germline . no 197 .
srip37604 chr14 60669254 60669254 - L1-Ta germline . no 197 .
srip37857 chr14 67419863 67419863 - L1-Ta germline . no 197 GPHN
srip38155 chr14 71197799 71197799 + L1-Ta germline . no 197 MAP3K9
srip38611 chr14 86381796 86381796 - L1-Ta germline . no 197 .
srip39510 chr15 34031839 34031839 - L1-Ta germline . no 197 RYR3
srip39581 chr15 34621609 34621609 + L1-Ta germline . no 197 SLC12A6
srip39752 chr15 37707890 37707890 - L1-Ta germline . no 197 .
srip40216 chr15 47507329 47507329 - L1-Ta germline . no 197 SEMA6D
srip43402 chr15 100931161 100931161 - L1-Ta germline . no 197 .
srip43643 chr16 6793831 6793831 + L1-Ta germline . no 197 RBFOX1
srip44082 chr16 17755305 17755305 - L1-Ta germline . no 197 .
srip44778 chr16 32523893 32523893 - L1-Ta germline . no 197 .
srip45061 chr16 32525611 32525611 - L1-Ta germline . no 197 .
srip45485 chr16 33992430 33992430 + L1-Ta germline . no 197 .
srip45876 chr16 61079188 61079188 + L1-Ta germline . no 197 .
srip46382 chr16 76539036 76539036 + L1-Ta germline validated no 197 CNTNAP4
srip47363 chr17 28398313 28398313 + L1-Ta germline . no 197 EFCAB5
srip47587 chr17 32813605 32813605 + L1-Ta germline . no 197 .
srip48893 chr18 12491262 12491262 + L1-Ta germline . no 197 SPIRE1
srip49780 chr18 39896936 39896936 - L1-Ta germline . no 197 .
srip50368 chr18 51451044 51451044 - L1-Ta germline . no 197 .
srip50404 chr18 51488332 51488332 - L1-Ta germline . no 197 .
srip53435 chr2 23191000 23191000 - L1-Ta germline . no 197 .
srip53680 chr2 24796757 24796757 + L1-Ta germline . no 197 .
srip54406 chr2 41913652 41913652 - L1-Ta germline . no 197 .
srip54601 chr2 42051403 42051403 + L1-Ta germline . no 197 .
srip54923 chr2 53460052 53460052 + L1-Ta germline . no 197 .
srip55301 chr2 69168896 69168896 - L1-Ta germline . no 197 .
srip56244 chr2 82098043 82098043 + L1-Ta germline . no 197 .
srip56527 chr2 83252984 83252984 + L1-Ta germline . no 197 .
srip57664 chr2 129372166 129372166 + L1-Ta germline . no 197 .
srip57744 chr2 129573984 129573984 + L1-Ta germline . no 197 .
srip57819 chr2 132868182 132868182 - L1-Ta germline . no 197 .
srip58215 chr2 141852908 141852908 - L1-Ta germline . no 197 LRP1B
srip58324 chr2 142785302 142785302 + L1-Ta germline . no 197 LRP1B
srip58673 chr2 144910831 144910831 - L1-Ta germline . no 197 GTDC1
srip60801 chr2 191478714 191478714 - L1-Ta germline . no 197 .
srip62172 chr2 221503768 221503768 - L1-Ta germline . no 197 .
srip62619 chr2 235519794 235519794 + L1-Ta germline . no 197 .
srip66035 chr21 19517313 19517313 - L1-Ta germline . no 197 .
srip66261 chr21 23626191 23626191 - L1-Ta germline . no 197 .
srip66871 chr21 29069171 29069171 + L1-Ta germline . no 197 .
srip67445 chr22 22486369 22486369 - L1-Ta germline . no 197 IGL@
srip68901 chr22 44324605 44324605 - L1-Ta germline . no 197 PNPLA3
srip69814 chr3 3408044 3408044 + L1-Ta germline . no 197 .
srip70075 chr3 17409573 17409573 - L1-Ta germline . no 197 TBC1D5
srip70804 chr3 24987874 24987874 - L1-Ta germline . no 197 .
srip71167 chr3 26524464 26524464 - L1-Ta germline . no 197 .
srip72746 chr3 55788580 55788580 + L1-Ta germline . no 197 ERC2
srip73414 chr3 59852903 59852903 + L1-Ta germline . no 197 FHIT
srip74428 chr3 80590163 80590163 - L1-Ta germline . no 197 .
srip74708 chr3 81990993 81990993 - L1-Ta germline . no 197 .
srip75833 chr3 86264950 86264950 - L1-Ta germline . no 197 .
srip75905 chr3 89022346 89022346 - L1-Ta germline . no 197 .
srip76443 chr3 105316337 105316337 + L1-Ta germline . no 197 .
srip76620 chr3 109751770 109751770 + L1-Ta germline . no 197 .
srip77282 chr3 123590726 123590726 + L1-Ta germline . no 197 MYLK
srip77893 chr3 139044441 139044441 + L1-Ta germline . no 197 .
srip78605 chr3 151148544 151148544 - L1-Ta germline . no 197 MED12L
srip78849 chr3 151688088 151688088 - L1-Ta germline . no 197 .
srip79885 chr3 169269964 169269964 + L1-Ta germline . no 197 MECOM
srip80401 chr3 176091333 176091333 + L1-Ta germline . no 197 .
srip81523 chr3 186372141 186372141 + L1-Ta germline . no 197 .
srip81651 chr3 187835309 187835309 - L1-Ta germline . no 197 .
srip82295 chr4 5667995 5667995 - L1-Ta germline . no 197 EVC2
srip82591 chr4 14849038 14849038 + L1-Ta germline . no 197 .
srip83119 chr4 18162689 18162689 - L1-Ta germline . no 197 .
srip83350 chr4 20246382 20246382 + L1-Ta germline . no 197 .
srip83837 chr4 29321851 29321851 + L1-Ta germline . no 197 .
srip84889 chr4 47007790 47007790 - L1-Ta germline . no 197 .
srip86145 chr4 63090791 63090791 - L1-Ta germline . no 197 .
srip86202 chr4 66413932 66413932 + L1-Ta germline . no 197 EPHA5
srip86621 chr4 69572737 69572737 - L1-Ta germline . no 197 LOC728811
srip86982 chr4 71093301 71093301 + L1-Ta germline . no 197 C4orf7
srip88828 chr4 103343746 103343746 + L1-Ta germline . no 197 .
srip89599 chr4 110248316 110248316 - L1-Ta germline . no 197 .
srip89672 chr4 110248332 110248332 - L1-Ta germline . no 197 .
srip89996 chr4 112628973 112628973 + L1-Ta germline . no 197 .
srip90300 chr4 115132695 115132695 + L1-Ta germline . no 197 .
srip90702 chr4 118765255 118765255 + L1-Ta germline . no 197 .
srip90824 chr4 120717544 120717544 - L1-Ta germline . no 197 .
srip91229 chr4 128965442 128965442 - L1-Ta germline . no 197 .
srip92221 chr4 134596423 134596423 + L1-Ta germline . no 197 .
srip92778 chr4 138177325 138177325 + L1-Ta germline . no 197 .
srip93116 chr4 147225296 147225296 + L1-Ta germline . no 197 SLC10A7
srip93862 chr4 158907272 158907272 - L1-Ta germline . no 197 .
srip96911 chr5 21207732 21207732 + L1-Ta germline . no 197 .
srip96937 chr5 21899845 21899845 + L1-Ta germline . no 197 CDH12
srip96976 chr5 23070273 23070273 + L1-Ta germline . no 197 .
srip97224 chr5 26093140 26093140 + L1-Ta germline . no 197 .
srip97962 chr5 33633348 33633348 - L1-Ta germline . no 197 ADAMTS12
srip98035 chr5 33797544 33797544 - L1-Ta germline . no 197 ADAMTS12
srip99679 chr5 73731035 73731035 + L1-Ta germline . no 197 .
srip99765 chr5 83619783 83619783 - L1-Ta germline . no 197 EDIL3
srip100775 chr5 89450781 89450781 + L1-Ta germline . no 197 .
srip102259 chr5 109480258 109480258 - L1-Ta germline . no 197 .
srip102532 chr5 109567542 109567542 + L1-Ta germline . no 197 .
srip102702 chr5 112449703 112449703 - L1-Ta germline validated no 197 MCC
srip102753 chr5 113568828 113568828 - L1-Ta germline . no 197 .
srip102775 chr5 115449063 115449063 - L1-pre-Ta germline . no 197 COMMD10
srip103376 chr5 125040045 125040045 + L1-Ta germline . no 197 .
srip103764 chr5 137014775 137014775 - L1-Ta germline . no 197 KLHL3
srip103886 chr5 137130147 137130147 - L1-Ta germline . no 197 .
srip104841 chr5 154873933 154873933 - L1-Ta germline . no 197 .
srip105235 chr5 155619865 155619865 + L1-Ta germline . no 197 .
srip107090 chr6 13191033 13191033 + L1-Ta germline . no 197 PHACTR1
srip107550 chr6 13503049 13503049 + L1-Ta germline . no 197 .
srip107725 chr6 19258212 19258212 + L1-Ta germline . no 197 .
srip108276 chr6 45852697 45852697 - L1-Ta germline . no 197 .
srip109549 chr6 63368207 63368207 + L1-Ta germline . no 197 .
srip109960 chr6 68112755 68112755 - L1-Ta germline . no 197 .
srip110114 chr6 69198745 69198745 - L1-Ta germline . no 197 .
srip111078 chr6 77980650 77980650 - L1-Ta germline . no 197 .
srip111213 chr6 78649689 78649689 - L1-Ta germline . no 197 .
srip112182 chr6 91669521 91669521 - L1-Ta germline . no 197 .
srip113771 chr6 142450101 142450101 - L1-Ta germline . no 197 .
srip114730 chr6 148195789 148195789 + L1-Ta germline . no 197 .
srip114884 chr6 154215663 154215663 + L1-Ta germline . no 197 .
srip115558 chr6 162181257 162181257 + L1-Ta germline . no 197 PARK2
srip117486 chr7 52789472 52789472 + L1-Ta germline . no 197 .
srip117967 chr7 61778308 61778308 - L1-Ta germline . no 197 .
srip118194 chr7 62492930 62492930 + L1-Ta germline . no 197 .
srip119860 chr7 84901724 84901724 - L1-Ta germline . no 197 .
srip120230 chr7 85044737 85044737 + L1-Ta germline . no 197 .
srip121162 chr7 106398050 106398050 - L1-Ta germline . no 197 .
srip121180 chr7 107410719 107410719 - L1-Ta germline . no 197 SLC26A3
srip121790 chr7 107829263 107829263 + L1-Ta germline . no 197 NRCAM
srip122249 chr7 110484749 110484749 + L1-Ta germline . no 197 IMMP2L
srip122300 chr7 111232935 111232935 - L1-Ta germline . no 197 .
srip122638 chr7 122124545 122124545 + L1-Ta germline . no 197 CADPS2
srip123128 chr7 134844920 134844920 + L1-Ta germline . no 197 TMEM140
srip124559 chr8 5829283 5829283 - L1-Ta germline . no 197 .
srip126921 chr8 67381885 67381885 - L1-Ta germline . no 197 .
srip127330 chr8 72399221 72399221 - L1-Ta germline . no 197 .
srip128241 chr8 87315040 87315040 + L1-Ta germline . no 197 .
srip128441 chr8 92186265 92186265 - L1-Ta germline . no 197 LRRC69
srip128469 chr8 93866769 93866769 + L1-Ta germline . no 197 .
srip128774 chr8 107557032 107557032 - L1-Ta germline . no 197 OXR1
srip129158 chr8 115788580 115788580 - L1-Ta germline . no 197 .
srip129668 chr8 119721703 119721703 - L1-Ta germline . no 197 SAMD12-AS1
srip130104 chr8 131041219 131041219 + L1-Ta germline . no 197 .
srip131140 chr9 6290494 6290494 + L1-Ta germline . no 197 .
srip133447 chr9 32463894 32463894 - L1-Ta germline . no 197 DDX58
srip133680 chr9 35883708 35883708 + L1-Ta germline . no 197 .
srip134686 chr9 100675534 100675534 - L1-Ta germline . no 197 C9orf156
srip135044 chr9 105073654 105073654 + L1-Ta germline . no 197 .
srip135988 chr9 118083880 118083880 - L1-Ta germline . no 197 DEC1
srip136161 chr9 136105857 136105857 - L1-Ta germline . no 197 .
srip136176 chr9 138411456 138411456 + L1-Ta germline . no 197 .
srip136526 chrX 14152012 14152012 - L1-Ta germline . no 197 .
srip136776 chrX 24384651 24384651 - L1-Ta germline . no 197 .
srip136793 chrX 29372132 29372132 + L1-Ta germline validated no 197 IL1RAPL1
srip141397 chrX 129525281 129525281 - L1-Ta germline . no 197 .