euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

221 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip62 chr1 14163093 14163093 + L1-Ta germline . no 195 .
srip846 chr1 56405398 56405398 - L1-Ta germline . no 195 LOC100507652
srip1563 chr1 69801795 69801795 + L1-Ta germline . no 195 .
srip2004 chr1 81855783 81855783 + L1-Ta germline . no 195 .
srip3071 chr1 102568923 102568923 + L1-Ta germline . no 195 .
srip3134 chr1 104646045 104646045 + L1-Ta germline . no 195 .
srip3593 chr1 112007827 112007827 + L1-Ta germline . no 195 .
srip3714 chr1 116980828 116980828 - L1-Ta germline . no 195 .
srip5034 chr1 169524859 169524859 + L1-Ta germline . no 195 F5
srip5549 chr1 183969672 183969672 - L1-Ta germline . no 195 GLT25D2
srip6013 chr1 192262268 192262268 - L1-Ta germline . no 195 .
srip6368 chr1 207579511 207579511 + L1-Ta germline . no 195 .
srip7820 chr10 19065785 19065785 - L1-Ta germline . no 195 .
srip8000 chr10 19216652 19216652 + L1-Ta germline . no 195 .
srip8197 chr10 25576935 25576935 - L1-Ta germline . no 195 GPR158
srip8814 chr10 42465627 42465627 + L1-Ta germline . no 195 .
srip9479 chr10 68178133 68178133 + L1-Ta germline . no 195 CTNNA3
srip9592 chr10 68949325 68949325 + L1-Ta germline . no 195 CTNNA3
srip11207 chr10 110453470 110453470 + L1-Ta germline . no 195 .
srip11498 chr10 122662191 122662191 + L1-Ta germline . no 195 WDR11
srip11899 chr10 126983631 126983631 - L1-Ta germline . no 195 .
srip11910 chr10 126983646 126983646 - L1-Ta germline . no 195 .
srip12728 chr11 24564755 24564755 - L1-Ta germline . no 195 LUZP2
srip12866 chr11 25123354 25123354 - L1-Ta germline . no 195 .
srip14361 chr11 41831811 41831811 - L1-Ta germline . no 195 .
srip14761 chr11 48360753 48360753 - L1-Ta germline . no 195 .
srip15353 chr11 58171838 58171838 + L1-Ta germline . no 195 .
srip17206 chr11 94684368 94684368 + L1-Ta germline . no 195 .
srip17765 chr11 104556130 104556130 - L1-Ta germline . no 195 .
srip18318 chr11 117195201 117195201 - L1-Ta germline . no 195 .
srip18566 chr11 128141113 128141113 + L1-Ta germline . no 195 .
srip18648 chr11 132682319 132682319 + L1-Ta germline . no 195 OPCML;LOC100128095
srip19319 chr11 134305648 134305648 - L1-Ta germline . no 195 .
srip20494 chr12 26588285 26588285 - L1-Ta germline . no 195 ITPR2
srip20715 chr12 28226413 28226413 - L1-Ta germline . no 195 .
srip21742 chr12 38035076 38035076 + L1-Ta germline . no 195 .
srip22258 chr12 43256986 43256986 - L1-Ta germline . no 195 .
srip24428 chr12 84955216 84955216 - L1-Ta germline . no 195 .
srip25134 chr12 95808527 95808527 - L1-Ta germline . no 195 .
srip26005 chr12 118186926 118186926 + L1-Ta germline . no 195 KSR2
srip26353 chr12 126802929 126802929 - L1-Ta germline . no 195 .
srip26710 chr13 19620990 19620990 + L1-Ta germline . no 195 PHF2P1
srip27483 chr13 27488126 27488126 + L1-Ta germline . no 195 .
srip28241 chr13 49521713 49521713 + L1-Ta germline . no 195 .
srip29050 chr13 61462336 61462336 - L1-Ta germline . no 195 .
srip31022 chr13 79259793 79259793 - L1-Ta germline . no 195 .
srip31428 chr13 85871602 85871602 - L1-Ta germline . no 195 .
srip33497 chr13 104296223 104296223 - L1-Ta germline . no 195 .
srip33654 chr13 104395943 104395943 - L1-Ta germline . no 195 .
srip33796 chr13 105280146 105280146 - L1-Ta germline . no 195 .
srip33810 chr13 106256352 106256352 - L1-Ta germline . no 195 .
srip34288 chr14 19000969 19000969 + L1-Ta germline . no 195 .
srip34591 chr14 26787480 26787480 - L1-Ta germline . no 195 .
srip35250 chr14 28301261 28301261 + L1-Ta germline . no 195 .
srip35265 chr14 28545328 28545328 - L1-Ta germline . no 195 .
srip35363 chr14 30854668 30854668 + L1-Ta germline . no 195 .
srip35569 chr14 34140125 34140125 - L1-Ta germline . no 195 NPAS3
srip37855 chr14 67419863 67419863 - L1-Ta germline . no 195 GPHN
srip37949 chr14 68784244 68784244 + L1-Ta germline . no 195 RAD51B
srip39508 chr15 34031839 34031839 - L1-Ta germline . no 195 RYR3
srip39924 chr15 46304802 46304802 + L1-Ta germline . no 195 .
srip40214 chr15 47507329 47507329 - L1-Ta germline . no 195 SEMA6D
srip40734 chr15 51843819 51843819 + L1-Ta germline . no 195 DMXL2
srip41020 chr15 55129551 55129551 + L1-Ta germline . no 195 .
srip41248 chr15 56251153 56251153 + L1-Ta germline . no 195 NEDD4
srip41689 chr15 61756190 61756190 + L1-Ta germline . no 195 .
srip43052 chr15 98622504 98622504 + L1-Ta germline . no 195 .
srip43400 chr15 100931161 100931161 - L1-Ta germline . no 195 .
srip45059 chr16 32525611 32525611 - L1-Ta germline . no 195 .
srip45484 chr16 33992430 33992430 + L1-Ta germline . no 195 .
srip45874 chr16 61079188 61079188 + L1-Ta germline . no 195 .
srip45893 chr16 62491608 62491608 - L1-Ta germline . no 195 .
srip47361 chr17 28398313 28398313 + L1-Ta germline . no 195 EFCAB5
srip49067 chr18 25797181 25797181 + L1-Ta germline . no 195 .
srip49228 chr18 27219200 27219200 - L1-Ta germline . no 195 .
srip50346 chr18 51425726 51425726 - L1-Ta germline . no 195 .
srip50402 chr18 51488332 51488332 - L1-Ta germline . no 195 .
srip50718 chr18 51762730 51762730 - L1-Ta germline . no 195 .
srip51182 chr18 63161480 63161480 + L1-Ta germline . no 195 .
srip51243 chr18 64979039 64979039 + L1-Ta germline . no 195 .
srip53949 chr2 35879359 35879359 + L1-Ta germline . no 195 .
srip54220 chr2 36570243 36570243 - L1-Ta germline . no 195 .
srip54599 chr2 42051403 42051403 + L1-Ta germline . no 195 .
srip54921 chr2 53460052 53460052 + L1-Ta germline . no 195 .
srip56242 chr2 82098043 82098043 + L1-Ta germline . no 195 .
srip56501 chr2 83188325 83188325 + L1-Ta germline . no 195 .
srip56669 chr2 92319790 92319790 - L1-Ta germline . no 195 .
srip56760 chr2 102912450 102912450 + L1-Ta germline . no 195 .
srip57817 chr2 132868182 132868182 - L1-Ta germline . no 195 .
srip59606 chr2 156527822 156527822 + L1-Ta germline . no 195 .
srip59628 chr2 156527862 156527862 + L1-Ta germline . no 195 .
srip60137 chr2 178676245 178676245 - L1-Ta germline . no 195 PDE11A
srip61920 chr2 221278223 221278223 - L1-Ta germline . no 195 .
srip63195 chr20 9477925 9477925 - L1-Ta germline . no 195 .
srip63931 chr20 22501649 22501649 + L1-Ta germline . no 195 .
srip64799 chr20 41952105 41952105 - L1-Ta germline . no 195 .
srip66259 chr21 23626191 23626191 - L1-Ta germline . no 195 .
srip66869 chr21 29069171 29069171 + L1-Ta germline . no 195 .
srip67886 chr22 26507199 26507199 - L1-Ta germline . no 195 .
srip70026 chr3 6752728 6752728 - L1-Ta germline . no 195 .
srip70073 chr3 17409573 17409573 - L1-Ta germline . no 195 TBC1D5
srip70449 chr3 20748896 20748896 - L1-Ta germline . no 195 .
srip71165 chr3 26524464 26524464 - L1-Ta germline . no 195 .
srip71286 chr3 28261984 28261984 - L1-Ta germline validated no 195 .
srip71925 chr3 38626082 38626082 + L1-Ta germline . no 195 SCN5A
srip72744 chr3 55788580 55788580 + L1-Ta germline . no 195 ERC2
srip73412 chr3 59852903 59852903 + L1-Ta germline . no 195 FHIT
srip73535 chr3 69181542 69181542 - L1-Ta germline . no 195 .
srip74426 chr3 80590163 80590163 - L1-Ta germline . no 195 .
srip74847 chr3 82144854 82144854 - L1-Ta germline . no 195 .
srip75676 chr3 85663354 85663354 - L1-Ta germline . no 195 CADM2
srip75904 chr3 89022346 89022346 - L1-Ta germline . no 195 .
srip76441 chr3 105316337 105316337 + L1-Ta germline . no 195 .
srip76699 chr3 111275065 111275065 + L1-Ta germline . no 195 CD96
srip77280 chr3 123590726 123590726 + L1-Ta germline . no 195 MYLK
srip78277 chr3 144610072 144610072 - L1-Ta germline . no 195 .
srip78603 chr3 151148544 151148544 - L1-Ta germline . no 195 MED12L
srip79325 chr3 162717306 162717306 + L1-Ta germline . no 195 .
srip79466 chr3 166092231 166092231 + L1-Ta germline . no 195 .
srip80399 chr3 176091333 176091333 + L1-Ta germline . no 195 .
srip80451 chr3 180091672 180091672 + L1-Ta germline . no 195 .
srip81521 chr3 186372141 186372141 + L1-Ta germline . no 195 .
srip81649 chr3 187835309 187835309 - L1-Ta germline . no 195 .
srip82134 chr3 193354175 193354175 - L1-Ta germline . no 195 OPA1
srip82449 chr4 13086506 13086506 - L1-Ta germline . no 195 .
srip83348 chr4 20246382 20246382 + L1-Ta germline . no 195 .
srip84887 chr4 47007790 47007790 - L1-Ta germline . no 195 .
srip85453 chr4 57497067 57497067 - L1-Ta germline . no 195 .
srip85825 chr4 58917529 58917529 - L1-Ta germline . no 195 .
srip86200 chr4 66413932 66413932 + L1-Ta germline . no 195 EPHA5
srip87708 chr4 82921896 82921896 + L1-Ta germline . no 195 .
srip88826 chr4 103343746 103343746 + L1-Ta germline . no 195 .
srip89024 chr4 104214686 104214686 + L1-Ta germline . no 195 .
srip89597 chr4 110248316 110248316 - L1-Ta germline . no 195 .
srip89670 chr4 110248332 110248332 - L1-Ta germline . no 195 .
srip89994 chr4 112628973 112628973 + L1-Ta germline . no 195 .
srip90018 chr4 113909989 113909989 - L1-Ta germline . no 195 ANK2
srip90298 chr4 115132695 115132695 + L1-Ta germline . no 195 .
srip92776 chr4 138177325 138177325 + L1-Ta germline . no 195 .
srip93114 chr4 147225296 147225296 + L1-Ta germline . no 195 SLC10A7
srip94039 chr4 165231730 165231730 - L1-Ta germline . no 195 MARCH1
srip95074 chr4 182418058 182418058 - L1-Ta germline . no 195 .
srip96363 chr5 11391276 11391276 + L1-Ta germline . no 195 CTNND2
srip96909 chr5 21207732 21207732 + L1-Ta germline . no 195 .
srip97222 chr5 26093140 26093140 + L1-Ta germline . no 195 .
srip97960 chr5 33633348 33633348 - L1-Ta germline . no 195 ADAMTS12
srip98359 chr5 41602028 41602028 + L1-Ta germline . no 195 .
srip98642 chr5 49435042 49435042 - L1-Ta germline . no 195 .
srip99046 chr5 53630865 53630865 + L1-Ta germline validated no 195 .
srip99111 chr5 57279517 57279517 + L1-Ta germline . no 195 .
srip100084 chr5 84239673 84239673 - L1-Ta germline . no 195 .
srip100773 chr5 89450781 89450781 + L1-Ta germline . no 195 .
srip101066 chr5 96866407 96866407 + L1-Ta germline . no 195 .
srip102257 chr5 109480258 109480258 - L1-Ta germline . no 195 .
srip102530 chr5 109567542 109567542 + L1-Ta germline . no 195 .
srip102773 chr5 115449063 115449063 - L1-pre-Ta germline . no 195 COMMD10
srip103538 chr5 132934086 132934086 + L1-Ta germline . no 195 FSTL4
srip105233 chr5 155619865 155619865 + L1-Ta germline . no 195 .
srip105806 chr5 164495144 164495144 - L1-Ta germline . no 195 LOC100507193
srip107089 chr6 13191033 13191033 + L1-Ta germline . no 195 PHACTR1
srip107548 chr6 13503049 13503049 + L1-Ta germline . no 195 .
srip108274 chr6 45852697 45852697 - L1-Ta germline . no 195 .
srip108668 chr6 46310291 46310291 + L1-Ta germline . no 195 .
srip108814 chr6 51614263 51614263 + L1-Ta germline . no 195 PKHD1
srip108955 chr6 56729315 56729315 - L1-Ta germline . no 195 LOC100652827
srip108978 chr6 57309681 57309681 - L1-pre-Ta germline . no 195 PRIM2
srip109958 chr6 68112755 68112755 - L1-Ta germline . no 195 .
srip109982 chr6 68132365 68132365 - L1-Ta germline validated no 195 .
srip111211 chr6 78649689 78649689 - L1-Ta germline . no 195 .
srip112180 chr6 91669521 91669521 - L1-Ta germline . no 195 .
srip112289 chr6 91767655 91767655 + L1-Ta germline . no 195 .
srip112324 chr6 94023141 94023141 - L1-Ta germline . no 195 EPHA7
srip112357 chr6 94263991 94263991 + L1-Ta germline . no 195 .
srip112374 chr6 97541554 97541554 - L1-Ta germline . no 195 KLHL32
srip112835 chr6 105619607 105619607 + L1-Ta germline . no 195 POPDC3
srip113017 chr6 114091140 114091140 + L1-Ta germline . no 195 LOC100652953
srip113769 chr6 142450101 142450101 - L1-Ta germline . no 195 .
srip114882 chr6 154215663 154215663 + L1-Ta germline . no 195 .
srip115077 chr6 157968737 157968737 - L1-Ta germline . no 195 ZDHHC14
srip115556 chr6 162181257 162181257 + L1-Ta germline . no 195 PARK2
srip116246 chr7 12377013 12377013 + L1-Ta germline . no 195 VWDE
srip116414 chr7 20170322 20170322 + L1-Ta germline . no 195 .
srip117066 chr7 43256726 43256726 - L1-Ta germline . no 195 HECW1
srip117484 chr7 52789472 52789472 + L1-Ta germline . no 195 .
srip117613 chr7 53652502 53652502 - L1-Ta germline . no 195 .
srip117965 chr7 61778308 61778308 - L1-Ta germline . no 195 .
srip118192 chr7 62492930 62492930 + L1-Ta germline . no 195 .
srip119858 chr7 84901724 84901724 - L1-Ta germline . no 195 .
srip120228 chr7 85044737 85044737 + L1-Ta germline . no 195 .
srip120380 chr7 86719213 86719213 - L1-Ta germline . no 195 .
srip122247 chr7 110484749 110484749 + L1-Ta germline . no 195 IMMP2L
srip122298 chr7 111232935 111232935 - L1-Ta germline . no 195 .
srip122689 chr7 124451334 124451334 - L1-Ta germline . no 195 .
srip123412 chr7 144908637 144908637 - L1-Ta germline . no 195 .
srip123419 chr7 144908830 144908830 + L1-Ta germline . no 195 .
srip125654 chr8 29056587 29056587 - L1-Ta germline . no 195 KIF13B
srip126919 chr8 67381885 67381885 - L1-Ta germline . no 195 .
srip127328 chr8 72399221 72399221 - L1-Ta germline . no 195 .
srip128239 chr8 87315040 87315040 + L1-Ta germline . no 195 .
srip128772 chr8 107557032 107557032 - L1-Ta germline . no 195 OXR1
srip129156 chr8 115788580 115788580 - L1-Ta germline . no 195 .
srip130352 chr8 134972242 134972242 + L1-pre-Ta germline . no 195 .
srip131138 chr9 6290494 6290494 + L1-Ta germline . no 195 .
srip131542 chr9 9236600 9236600 + L1-Ta germline . no 195 PTPRD
srip132403 chr9 30495887 30495887 - L1-Ta germline . no 195 .
srip132624 chr9 30674468 30674468 - L1-Ta germline . no 195 .
srip133445 chr9 32463894 32463894 - L1-Ta germline . no 195 DDX58
srip133678 chr9 35883708 35883708 + L1-Ta germline . no 195 .
srip133923 chr9 72318364 72318364 - L1-Ta germline . no 195 .
srip133996 chr9 73584446 73584446 + L1-Ta germline . no 195 TRPM3
srip134080 chr9 77727357 77727357 - L1-Ta germline . no 195 OSTF1
srip135987 chr9 118083880 118083880 - L1-Ta germline . no 195 DEC1
srip136316 chrX 11628376 11628376 - L1-Ta germline . no 195 ARHGAP6
srip136810 chrX 31483112 31483112 - L1-Ta germline . no 195 DMD
srip137093 chrX 54717044 54717044 - L1-Ta germline . no 195 .
srip140447 chrX 111557750 111557750 - L1-Ta germline . no 195 ZCCHC16
srip141111 chrX 123611800 123611800 + L1-Ta germline . no 195 ODZ1
srip141130 chrX 123612276 123612276 - L1-Ta germline . no 195 ODZ1
srip141395 chrX 129525281 129525281 - L1-Ta germline . no 195 .
srip142219 chrY 9951878 9951878 - L1-pre-Ta germline . no 195 .
srip142315 chrY 13653796 13653796 - L1-Ta germline . no 195 .