euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

224 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip61 chr1 14163093 14163093 + L1-Ta germline . no 189 .
srip163 chr1 30377070 30377070 - L1-Ta germline . no 189 .
srip1202 chr1 66471382 66471382 + L1-Ta germline . no 189 PDE4B
srip1998 chr1 81855783 81855783 + L1-Ta germline . no 189 .
srip2402 chr1 90914512 90914512 + L1-Ta germline validated no 189 .
srip3198 chr1 105028226 105028226 + L1-Ta germline . no 189 .
srip4244 chr1 157732949 157732949 + L1-Ta germline . no 189 FCRL2
srip5032 chr1 169524859 169524859 + L1-Ta germline . no 189 F5
srip6011 chr1 192262268 192262268 - L1-Ta germline . no 189 .
srip6168 chr1 194552989 194552989 + L1-Ta germline . no 189 .
srip6311 chr1 198442492 198442492 + L1-Ta germline . no 189 .
srip6341 chr1 206609875 206609875 - L1-Ta germline . no 189 SRGAP2
srip6362 chr1 207579511 207579511 + L1-Ta germline . no 189 .
srip6395 chr1 210198291 210198291 - L1-Ta germline . no 189 SYT14
srip6399 chr1 210295340 210295340 - L1-Ta germline . no 189 SYT14
srip6946 chr1 222579116 222579116 - L1-Ta germline . no 189 .
srip7818 chr10 19065785 19065785 - L1-Ta germline . no 189 .
srip9477 chr10 68178133 68178133 + L1-Ta germline . no 189 CTNNA3
srip9681 chr10 74767506 74767506 - L1-Ta germline . no 189 P4HA1
srip9980 chr10 83204799 83204799 - L1-pre-Ta germline . no 189 .
srip11496 chr10 122662191 122662191 + L1-Ta germline . no 189 WDR11
srip13268 chr11 30180463 30180463 + L1-Ta germline . no 189 .
srip14357 chr11 41831811 41831811 - L1-Ta germline . no 189 .
srip14398 chr11 41869861 41869861 + L1-Ta germline . no 189 .
srip14755 chr11 48360753 48360753 - L1-Ta germline . no 189 .
srip15037 chr11 50399980 50399980 - L1-Ta germline . no 189 .
srip17761 chr11 104556130 104556130 - L1-Ta germline . no 189 .
srip18517 chr11 123241794 123241794 + L1-Ta germline . no 189 .
srip19313 chr11 134305648 134305648 - L1-Ta germline . no 189 .
srip20711 chr12 28226413 28226413 - L1-Ta germline . no 189 .
srip22965 chr12 55782238 55782238 + L1-Ta germline . no 189 OR6C66P
srip23029 chr12 63569179 63569179 + L1-Ta germline . no 189 .
srip23370 chr12 67443914 67443914 - L1-Ta germline . no 189 .
srip23375 chr12 67444346 67444346 + L1-Ta germline . no 189 .
srip24147 chr12 81917112 81917112 - L1-Ta germline . no 189 PPFIA2
srip24424 chr12 84955216 84955216 - L1-Ta germline . no 189 .
srip25128 chr12 95808527 95808527 - L1-Ta germline . no 189 .
srip25999 chr12 118186926 118186926 + L1-Ta germline . no 189 KSR2
srip26643 chr12 128777545 128777545 - L1-Ta germline . no 189 TMEM132C
srip27479 chr13 27488126 27488126 + L1-Ta germline . no 189 .
srip28043 chr13 46272505 46272505 + L1-Ta germline . no 189 .
srip28437 chr13 58556528 58556528 + L1-Ta germline . no 189 .
srip29044 chr13 61462336 61462336 - L1-Ta germline . no 189 .
srip29616 chr13 61734485 61734485 + L1-Ta germline . no 189 .
srip30389 chr13 72968682 72968682 + L1-Ta germline . no 189 .
srip30648 chr13 79009313 79009313 - L1-Ta germline . no 189 .
srip31016 chr13 79259793 79259793 - L1-Ta germline . no 189 .
srip31422 chr13 85871602 85871602 - L1-Ta germline . no 189 .
srip32255 chr13 89423371 89423371 - L1-Ta germline . no 189 .
srip33491 chr13 104296223 104296223 - L1-Ta germline . no 189 .
srip33648 chr13 104395943 104395943 - L1-Ta germline . no 189 .
srip33790 chr13 105280146 105280146 - L1-Ta germline . no 189 .
srip34282 chr14 19000969 19000969 + L1-Ta germline . no 189 .
srip35244 chr14 28301261 28301261 + L1-Ta germline . no 189 .
srip35361 chr14 30854668 30854668 + L1-Ta germline . no 189 .
srip36027 chr14 36674760 36674760 + L1-Ta germline . no 189 .
srip36749 chr14 43668855 43668855 - L1-Ta germline . no 189 .
srip37148 chr14 52667758 52667758 - L1-Ta germline . no 189 .
srip37681 chr14 67419043 67419043 + L1-Ta germline validated no 189 GPHN
srip37853 chr14 67419863 67419863 - L1-Ta germline . no 189 GPHN
srip37947 chr14 68784244 68784244 + L1-Ta germline . no 189 RAD51B
srip38379 chr14 81477209 81477209 - L1-Ta germline . no 189 TSHR
srip38410 chr14 86149599 86149599 + L1-Ta germline . no 189 .
srip39028 chr15 22412531 22412531 - L1-Ta germline . no 189 .
srip39504 chr15 34031839 34031839 - L1-Ta germline . no 189 RYR3
srip39615 chr15 35654131 35654131 - L1-Ta germline . no 189 .
srip40210 chr15 47507329 47507329 - L1-Ta germline . no 189 SEMA6D
srip41644 chr15 61328974 61328974 - L1-Ta germline . no 189 RORA
srip43048 chr15 98622504 98622504 + L1-Ta germline . no 189 .
srip43397 chr15 100931161 100931161 - L1-Ta germline . no 189 .
srip43639 chr16 6793831 6793831 + L1-Ta germline . no 189 RBFOX1
srip45053 chr16 32525611 32525611 - L1-Ta germline . no 189 .
srip45478 chr16 33992430 33992430 + L1-Ta germline . no 189 .
srip45577 chr16 51803074 51803074 + L1-Ta germline . no 189 .
srip45868 chr16 61079188 61079188 + L1-Ta germline . no 189 .
srip46359 chr16 71294354 71294354 + L1-Ta germline . no 189 .
srip47355 chr17 28398313 28398313 + L1-Ta germline . no 189 EFCAB5
srip48891 chr18 12491262 12491262 + L1-Ta germline . no 189 SPIRE1
srip49224 chr18 27219200 27219200 - L1-Ta germline . no 189 .
srip50003 chr18 49216219 49216219 - L1-Ta germline . no 189 .
srip50342 chr18 51425726 51425726 - L1-Ta germline . no 189 .
srip50886 chr18 58255673 58255673 + L1-Ta germline . no 189 .
srip52417 chr19 44979614 44979614 + L1-Ta germline . no 189 .
srip52765 chr2 6798288 6798288 - L1-Ta germline . no 189 .
srip52856 chr2 11949281 11949281 + L1-Ta germline . no 189 LPIN1
srip53431 chr2 23191000 23191000 - L1-Ta germline . no 189 .
srip53758 chr2 35760013 35760013 - L1-Ta germline . no 189 .
srip54102 chr2 36381238 36381238 + L1-Ta germline . no 189 .
srip54595 chr2 42051403 42051403 + L1-Ta germline . no 189 .
srip54763 chr2 49386669 49386669 - L1-Ta germline validated no 189 .
srip54917 chr2 53460052 53460052 + L1-Ta germline . no 189 .
srip55033 chr2 65721223 65721223 - L1-Ta germline . no 189 .
srip55299 chr2 69168896 69168896 - L1-Ta germline . no 189 .
srip56499 chr2 83188325 83188325 + L1-Ta germline . no 189 .
srip56756 chr2 102912450 102912450 + L1-Ta germline . no 189 .
srip57661 chr2 129372166 129372166 + L1-Ta germline . no 189 .
srip57811 chr2 132868182 132868182 - L1-Ta germline . no 189 .
srip58209 chr2 141852908 141852908 - L1-Ta germline . no 189 LRP1B
srip59494 chr2 154100589 154100589 - L1-Ta germline . no 189 .
srip59892 chr2 174534152 174534152 + L1-Ta germline . no 189 .
srip59894 chr2 174534171 174534171 + L1-Ta germline . no 189 .
srip60131 chr2 178676245 178676245 - L1-Ta germline . no 189 PDE11A
srip60379 chr2 179372783 179372783 - L1-Ta germline . no 189 .
srip61287 chr2 205599773 205599773 - L1-Ta germline . no 189 PARD3B
srip61918 chr2 221278223 221278223 - L1-Ta germline . no 189 .
srip62465 chr2 232482740 232482740 + L1-Ta germline . no 189 .
srip63107 chr20 7829082 7829082 + L1-Ta germline . no 189 .
srip63191 chr20 9477925 9477925 - L1-Ta germline . no 189 .
srip63643 chr20 17860937 17860937 + L1-Ta germline . no 189 .
srip63929 chr20 22501649 22501649 + L1-Ta germline . no 189 .
srip65614 chr21 17134462 17134462 + L1-Ta germline . no 189 USP25
srip66029 chr21 19517313 19517313 - L1-Ta germline . no 189 .
srip66255 chr21 23626191 23626191 - L1-Ta germline . no 189 .
srip66863 chr21 29069171 29069171 + L1-Ta germline . no 189 .
srip67443 chr22 22486369 22486369 - L1-Ta germline . no 189 IGL@
srip70067 chr3 17409573 17409573 - L1-Ta germline . no 189 TBC1D5
srip70617 chr3 21800882 21800882 + L1-Ta germline . no 189 .
srip70816 chr3 25278891 25278891 - L1-Ta germline . no 189 .
srip71159 chr3 26524464 26524464 - L1-Ta germline . no 189 .
srip73410 chr3 59852903 59852903 + L1-Ta germline . no 189 FHIT
srip73778 chr3 75101216 75101216 + L1-Ta germline . no 189 .
srip74843 chr3 82144854 82144854 - L1-Ta germline . no 189 .
srip74963 chr3 83613997 83613997 + L1-Ta germline . no 189 .
srip75323 chr3 84593288 84593288 - L1-Ta germline . no 189 .
srip75674 chr3 85663354 85663354 - L1-Ta germline . no 189 CADM2
srip75900 chr3 89022346 89022346 - L1-Ta germline . no 189 .
srip76097 chr3 98775485 98775485 - L1-Ta germline . no 189 .
srip76436 chr3 105316337 105316337 + L1-Ta germline . no 189 .
srip77276 chr3 123590726 123590726 + L1-Ta germline . no 189 MYLK
srip77500 chr3 131069779 131069779 + L1-Ta germline . no 189 LOC339874
srip78275 chr3 144610072 144610072 - L1-Ta germline . no 189 .
srip78597 chr3 151148544 151148544 - L1-Ta germline . no 189 MED12L
srip80393 chr3 176091333 176091333 + L1-Ta germline . no 189 .
srip80449 chr3 180091672 180091672 + L1-Ta germline . no 189 .
srip81515 chr3 186372141 186372141 + L1-Ta germline . no 189 .
srip81643 chr3 187835309 187835309 - L1-Ta germline . no 189 .
srip83342 chr4 20246382 20246382 + L1-Ta germline . no 189 .
srip84073 chr4 40966470 40966470 + L1-Ta germline . no 189 APBB2
srip84883 chr4 47007790 47007790 - L1-Ta germline . no 189 .
srip85131 chr4 53628490 53628490 + L1-Ta germline . no 189 .
srip85449 chr4 57497067 57497067 - L1-Ta germline . no 189 .
srip86196 chr4 66413932 66413932 + L1-Ta germline . no 189 EPHA5
srip86617 chr4 69572737 69572737 - L1-Ta germline . no 189 LOC728811
srip87220 chr4 80768518 80768518 + L1-Ta germline . no 189 GDEP
srip87351 chr4 80768541 80768541 + L1-Ta germline . no 189 GDEP
srip87822 chr4 85317459 85317459 - L1-Ta germline . no 189 .
srip87836 chr4 85317475 85317475 - L1-Ta germline . no 189 .
srip88822 chr4 103343746 103343746 + L1-Ta germline . no 189 .
srip88913 chr4 103599605 103599605 + L1-Ta germline validated no 189 MANBA
srip89593 chr4 110248316 110248316 - L1-Ta germline . no 189 .
srip89666 chr4 110248332 110248332 - L1-Ta germline . no 189 .
srip89990 chr4 112628973 112628973 + L1-Ta germline . no 189 .
srip90292 chr4 115132695 115132695 + L1-Ta germline . no 189 .
srip90625 chr4 118332411 118332411 - L1-Ta germline . no 189 .
srip91124 chr4 126824141 126824141 + L1-Ta germline . no 189 .
srip91148 chr4 127275367 127275367 + L1-Ta germline . no 189 .
srip92267 chr4 135420700 135420700 + L1-Ta germline . no 189 .
srip92770 chr4 138177325 138177325 + L1-Ta germline . no 189 .
srip93108 chr4 147225296 147225296 + L1-Ta germline . no 189 SLC10A7
srip95072 chr4 182418058 182418058 - L1-Ta germline . no 189 .
srip96359 chr5 11391276 11391276 + L1-Ta germline . no 189 CTNND2
srip96789 chr5 16883042 16883042 - L1-Ta germline . no 189 MYO10
srip96805 chr5 18306854 18306854 + L1-Ta germline validated no 189 .
srip97954 chr5 33633348 33633348 - L1-Ta germline . no 189 ADAMTS12
srip98602 chr5 46396964 46396964 + L1-Ta germline . no 189 .
srip99109 chr5 57279517 57279517 + L1-Ta germline . no 189 .
srip100767 chr5 89450781 89450781 + L1-Ta germline . no 189 .
srip102251 chr5 109480258 109480258 - L1-Ta germline . no 189 .
srip102528 chr5 109567542 109567542 + L1-Ta germline . no 189 .
srip102771 chr5 115449063 115449063 - L1-pre-Ta germline . no 189 COMMD10
srip103414 chr5 130257380 130257380 + L1-Ta germline . no 189 .
srip105229 chr5 155619865 155619865 + L1-Ta germline . no 189 .
srip107755 chr6 22670019 22670019 - L1-pre-Ta germline . no 189 .
srip108953 chr6 56729315 56729315 - L1-Ta germline . no 189 LOC100652827
srip109791 chr6 65412808 65412808 + L1-Ta germline . no 189 EYS
srip109952 chr6 68112755 68112755 - L1-Ta germline . no 189 .
srip110669 chr6 77379922 77379922 - L1-Ta germline . no 189 .
srip112176 chr6 91669521 91669521 - L1-Ta germline . no 189 .
srip112355 chr6 94263991 94263991 + L1-Ta germline . no 189 .
srip112385 chr6 98096213 98096213 + L1-Ta germline . no 189 .
srip112396 chr6 98652124 98652124 - L1-pre-Ta germline . no 189 .
srip112958 chr6 113480552 113480552 + L1-Ta germline . no 189 .
srip114876 chr6 154215663 154215663 + L1-Ta germline . no 189 .
srip115071 chr6 157968737 157968737 - L1-Ta germline . no 189 ZDHHC14
srip116412 chr7 20170322 20170322 + L1-Ta germline . no 189 .
srip117077 chr7 45485689 45485689 + L1-Ta germline . no 189 .
srip117229 chr7 52221997 52221997 - L1-Ta germline . no 189 .
srip117479 chr7 52789472 52789472 + L1-Ta germline . no 189 .
srip117961 chr7 61778308 61778308 - L1-Ta germline . no 189 .
srip118186 chr7 62492930 62492930 + L1-Ta germline . no 189 .
srip119852 chr7 84901724 84901724 - L1-Ta germline . no 189 .
srip120702 chr7 92857576 92857576 - L1-Ta germline . no 189 .
srip121140 chr7 105967895 105967895 + L1-Ta germline . no 189 .
srip122296 chr7 111232935 111232935 - L1-Ta germline . no 189 .
srip122665 chr7 124261736 124261736 + L1-Ta germline . no 189 .
srip122695 chr7 125291681 125291681 + L1-Ta germline . no 189 .
srip123341 chr7 142818667 142818667 + L1-Ta germline . no 189 .
srip124039 chr8 4452894 4452894 - L1-Ta germline . no 189 CSMD1
srip124553 chr8 5829283 5829283 - L1-Ta germline . no 189 .
srip125415 chr8 24926545 24926545 - L1-Ta germline . no 189 .
srip125704 chr8 38193063 38193063 + L1-Ta germline validated no 189 WHSC1L1
srip125774 chr8 40433176 40433176 - L1-Ta germline . no 189 ZMAT4
srip126402 chr8 58347940 58347940 + L1-Ta germline . no 189 .
srip126915 chr8 67381885 67381885 - L1-Ta germline . no 189 .
srip128095 chr8 85023896 85023896 - L1-Ta germline . no 189 .
srip128186 chr8 85428622 85428622 + L1-Ta germline . no 189 RALYL
srip128440 chr8 92186265 92186265 - L1-Ta germline . no 189 LRRC69
srip129013 chr8 115773126 115773126 + L1-Ta germline . no 189 .
srip130567 chr9 4265400 4265400 + L1-Ta germline . no 189 GLIS3
srip131132 chr9 6290494 6290494 + L1-Ta germline . no 189 .
srip131540 chr9 9236600 9236600 + L1-Ta germline . no 189 PTPRD
srip132401 chr9 30495887 30495887 - L1-Ta germline . no 189 .
srip132622 chr9 30674468 30674468 - L1-Ta germline . no 189 .
srip133439 chr9 32463894 32463894 - L1-Ta germline . no 189 DDX58
srip133672 chr9 35883708 35883708 + L1-Ta germline . no 189 .
srip133826 chr9 68420861 68420861 - L1-Ta germline . no 189 .
srip134228 chr9 82082793 82082793 - L1-Ta germline . no 189 .
srip136034 chr9 121394590 121394590 - L1-Ta germline . no 189 .
srip136214 chrX 3879104 3879104 - L1-Ta germline . no 189 .
srip139490 chrX 94852538 94852538 - L1-Ta germline . no 189 .
srip141109 chrX 123611800 123611800 + L1-Ta germline . no 189 ODZ1
srip141127 chrX 123612276 123612276 - L1-Ta germline . no 189 ODZ1
srip141962 chrX 140515258 140515258 - L1-Ta germline . no 189 .
srip142026 chrX 143704684 143704684 + L1-Ta germline . no 189 .