euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

192 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip90 chr1 17229479 17229479 - L1-Ta germline . no 186 .
srip1995 chr1 81855783 81855783 + L1-Ta germline . no 186 .
srip3324 chr1 106396428 106396428 - L1-Ta germline . no 186 .
srip3619 chr1 114046370 114046370 + L1-Ta germline . no 186 MAGI3
srip4034 chr1 149216797 149216797 + L1-Ta germline . no 186 .
srip4740 chr1 165553136 165553136 - L1-Ta germline . no 186 .
srip5407 chr1 179575362 179575362 - L1-Ta germline . no 186 TDRD5
srip6359 chr1 207579511 207579511 + L1-Ta germline . no 186 .
srip7002 chr1 225393576 225393576 - L1-Ta germline . no 186 DNAH14
srip7401 chr1 242311577 242311577 + L1-Ta germline validated no 186 PLD5
srip7815 chr10 19065785 19065785 - L1-Ta germline . no 186 .
srip8416 chr10 25707687 25707687 - L1-Ta germline . no 186 GPR158
srip9678 chr10 74767506 74767506 - L1-Ta germline . no 186 P4HA1
srip11202 chr10 110453470 110453470 + L1-Ta germline . no 186 .
srip13785 chr11 33670123 33670123 + L1-Ta germline . no 186 C11orf41
srip13853 chr11 36558472 36558472 - L1-Ta germline . no 186 .
srip14354 chr11 41831811 41831811 - L1-Ta germline . no 186 .
srip14752 chr11 48360753 48360753 - L1-Ta germline . no 186 .
srip15104 chr11 55011014 55011014 + L1-Ta germline . no 186 .
srip15146 chr11 55870759 55870759 + L1-Ta germline . no 186 .
srip17201 chr11 94684368 94684368 + L1-Ta germline . no 186 .
srip17344 chr11 97434311 97434311 - L1-Ta germline . no 186 .
srip17760 chr11 104556130 104556130 - L1-Ta germline . no 186 .
srip18039 chr11 110377879 110377879 - L1-Ta germline . no 186 .
srip19310 chr11 134305648 134305648 - L1-Ta germline . no 186 .
srip20969 chr12 33325793 33325793 - L1-Ta germline . no 186 .
srip21157 chr12 34017325 34017325 - L1-Ta germline . no 186 .
srip22251 chr12 43256986 43256986 - L1-Ta germline . no 186 .
srip24423 chr12 84955216 84955216 - L1-Ta germline . no 186 .
srip24638 chr12 84965148 84965148 + L1-Ta germline . no 186 .
srip25125 chr12 95808527 95808527 - L1-Ta germline . no 186 .
srip25250 chr12 98669929 98669929 + L1-Ta germline . no 186 .
srip25998 chr12 118186926 118186926 + L1-Ta germline . no 186 KSR2
srip27007 chr13 22489805 22489805 + L1-Ta germline . no 186 .
srip27650 chr13 35787766 35787766 - L1-Ta germline . no 186 NBEA
srip28013 chr13 42771403 42771403 + L1-Ta germline . no 186 DGKH
srip28039 chr13 42970481 42970481 - L1-Ta germline . no 186 .
srip28166 chr13 48856541 48856541 + L1-Ta germline . no 186 .
srip29041 chr13 61462336 61462336 - L1-Ta germline . no 186 .
srip29615 chr13 61734485 61734485 + L1-Ta germline . no 186 .
srip30643 chr13 78693222 78693222 + L1-Ta germline . no 186 .
srip31013 chr13 79259793 79259793 - L1-Ta germline . no 186 .
srip31421 chr13 85871602 85871602 - L1-Ta germline . no 186 .
srip32011 chr13 86340153 86340153 - L1-Ta germline . no 186 .
srip32191 chr13 88475686 88475686 - L1-Ta germline . no 186 .
srip33488 chr13 104296223 104296223 - L1-Ta germline . no 186 .
srip33645 chr13 104395943 104395943 - L1-Ta germline . no 186 .
srip33787 chr13 105280146 105280146 - L1-Ta germline . no 186 .
srip34279 chr14 19000969 19000969 + L1-Ta germline . no 186 .
srip35241 chr14 28301261 28301261 + L1-Ta germline . no 186 .
srip35324 chr14 30525243 30525243 + L1-Ta germline . no 186 .
srip35458 chr14 31150809 31150809 - L1-Ta germline . no 186 SCFD1
srip36024 chr14 36674760 36674760 + L1-Ta germline . no 186 .
srip36075 chr14 37769602 37769602 - L1-Ta germline . no 186 MIPOL1
srip37049 chr14 49621405 49621405 + L1-Ta germline . no 186 .
srip37145 chr14 52667758 52667758 - L1-Ta germline . no 186 .
srip38313 chr14 78729953 78729953 - L1-Ta germline . no 186 .
srip38606 chr14 86381796 86381796 - L1-Ta germline . no 186 .
srip38951 chr14 107038564 107038564 + L1-Ta germline . no 186 IGH@
srip39749 chr15 37707890 37707890 - L1-Ta germline . no 186 .
srip40207 chr15 47507329 47507329 - L1-Ta germline . no 186 SEMA6D
srip41643 chr15 61328974 61328974 - L1-Ta germline . no 186 RORA
srip41696 chr15 62064901 62064901 + L1-Ta germline . no 186 .
srip41717 chr15 62169638 62169638 - L1-Ta germline . no 186 VPS13C
srip43394 chr15 100931161 100931161 - L1-Ta germline . no 186 .
srip44769 chr16 32523893 32523893 - L1-Ta germline . no 186 .
srip45050 chr16 32525611 32525611 - L1-Ta germline . no 186 .
srip45476 chr16 33992430 33992430 + L1-Ta germline . no 186 .
srip45865 chr16 61079188 61079188 + L1-Ta germline . no 186 .
srip47352 chr17 28398313 28398313 + L1-Ta germline . no 186 EFCAB5
srip48439 chr17 68357409 68357409 + L1-Ta germline . no 186 .
srip50714 chr18 51762730 51762730 - L1-Ta germline . no 186 .
srip51820 chr18 74960068 74960068 - L1-Ta germline . no 186 .
srip53428 chr2 23191000 23191000 - L1-Ta germline . no 186 .
srip53946 chr2 35879359 35879359 + L1-Ta germline . no 186 .
srip54217 chr2 36570243 36570243 - L1-Ta germline . no 186 .
srip54592 chr2 42051403 42051403 + L1-Ta germline . no 186 .
srip54914 chr2 53460052 53460052 + L1-Ta germline . no 186 .
srip56498 chr2 83188325 83188325 + L1-Ta germline . no 186 .
srip56668 chr2 92319790 92319790 - L1-Ta germline . no 186 .
srip57808 chr2 132868182 132868182 - L1-Ta germline . no 186 .
srip58206 chr2 141852908 141852908 - L1-Ta germline . no 186 LRP1B
srip58575 chr2 144010793 144010793 + L1-Ta germline . no 186 ARHGAP15
srip58672 chr2 144910831 144910831 - L1-Ta germline . no 186 GTDC1
srip59883 chr2 173854096 173854096 - L1-Ta germline . no 186 RAPGEF4
srip60128 chr2 178676245 178676245 - L1-Ta germline . no 186 PDE11A
srip61135 chr2 199779914 199779914 + L1-Ta germline . no 186 .
srip61243 chr2 201638085 201638085 + L1-Ta germline . no 186 AOX2P
srip61917 chr2 221278223 221278223 - L1-Ta germline . no 186 .
srip62614 chr2 235519794 235519794 + L1-Ta germline . no 186 .
srip63088 chr20 7292200 7292200 + L1-Ta germline . no 186 .
srip63443 chr20 16479495 16479495 - L1-Ta germline . no 186 KIF16B
srip64005 chr20 25844027 25844027 + L1-Ta germline . no 186 .
srip64792 chr20 41952105 41952105 - L1-Ta germline . no 186 .
srip66026 chr21 19517313 19517313 - L1-Ta germline . no 186 .
srip66862 chr21 29069171 29069171 + L1-Ta germline . no 186 .
srip67831 chr22 22715588 22715588 + L1-Ta germline . no 186 IGL@
srip69634 chr3 656435 656435 - L1-Ta germline . no 186 .
srip70064 chr3 17409573 17409573 - L1-Ta germline . no 186 TBC1D5
srip71920 chr3 38626082 38626082 + L1-Ta germline . no 186 SCN5A
srip73407 chr3 59852903 59852903 + L1-Ta germline . no 186 FHIT
srip73775 chr3 75101216 75101216 + L1-Ta germline . no 186 .
srip75607 chr3 85576568 85576568 + L1-Ta germline . no 186 CADM2
srip76811 chr3 119046413 119046413 + L1-Ta germline . no 186 ARHGAP31
srip77273 chr3 123590726 123590726 + L1-Ta germline . no 186 MYLK
srip78594 chr3 151148544 151148544 - L1-Ta germline . no 186 MED12L
srip78848 chr3 151688088 151688088 - L1-Ta germline . no 186 .
srip80219 chr3 175677970 175677970 - L1-Ta germline . no 186 .
srip80390 chr3 176091333 176091333 + L1-Ta germline . no 186 .
srip80448 chr3 180091672 180091672 + L1-Ta germline . no 186 .
srip81640 chr3 187835309 187835309 - L1-Ta germline . no 186 .
srip83339 chr4 20246382 20246382 + L1-Ta germline . no 186 .
srip84880 chr4 47007790 47007790 - L1-Ta germline . no 186 .
srip86193 chr4 66413932 66413932 + L1-Ta germline . no 186 EPHA5
srip86614 chr4 69572737 69572737 - L1-Ta germline . no 186 LOC728811
srip89592 chr4 110248316 110248316 - L1-Ta germline . no 186 .
srip89665 chr4 110248332 110248332 - L1-Ta germline . no 186 .
srip92216 chr4 134596423 134596423 + L1-Ta germline . no 186 .
srip93105 chr4 147225296 147225296 + L1-Ta germline . no 186 SLC10A7
srip95368 chr4 190659695 190659695 + L1-Ta germline . no 186 .
srip95470 chr5 1645773 1645773 + L1-Ta germline . no 186 .
srip96049 chr5 8749515 8749515 + L1-Ta germline . no 186 .
srip96358 chr5 11391276 11391276 + L1-Ta germline . no 186 CTNND2
srip97034 chr5 24207830 24207830 - L1-Ta germline . no 186 .
srip97951 chr5 33633348 33633348 - L1-Ta germline . no 186 ADAMTS12
srip98312 chr5 41428535 41428535 + L1-Ta germline . no 186 PLCXD3
srip98599 chr5 46396964 46396964 + L1-Ta germline . no 186 .
srip100079 chr5 84239673 84239673 - L1-Ta germline . no 186 .
srip100764 chr5 89450781 89450781 + L1-Ta germline . no 186 .
srip101061 chr5 96866407 96866407 + L1-Ta germline . no 186 .
srip102250 chr5 109480258 109480258 - L1-Ta germline . no 186 .
srip102525 chr5 109567542 109567542 + L1-Ta germline . no 186 .
srip103371 chr5 125040045 125040045 + L1-Ta germline . no 186 .
srip103761 chr5 137014775 137014775 - L1-Ta germline . no 186 KLHL3
srip104836 chr5 154873933 154873933 - L1-Ta germline . no 186 .
srip104891 chr5 155333908 155333908 - L1-Ta germline . no 186 .
srip105572 chr5 159351199 159351199 - L1-Ta germline . no 186 ADRA1B
srip105805 chr5 164495144 164495144 - L1-Ta germline . no 186 LOC100507193
srip107082 chr6 13191033 13191033 + L1-Ta germline . no 186 PHACTR1
srip107945 chr6 32457289 32457289 + L1-Ta germline . no 186 .
srip108011 chr6 32509106 32509106 - L1-Ta germline . no 186 .
srip108070 chr6 32589567 32589567 + L1-Ta germline . no 186 .
srip108270 chr6 45852697 45852697 - L1-Ta germline . no 186 .
srip109949 chr6 68112755 68112755 - L1-Ta germline . no 186 .
srip111072 chr6 77980650 77980650 - L1-Ta germline . no 186 .
srip111273 chr6 78749392 78749392 + L1-Ta germline . no 186 .
srip112175 chr6 91669521 91669521 - L1-Ta germline . no 186 .
srip113014 chr6 114091140 114091140 + L1-Ta germline . no 186 LOC100652953
srip113339 chr6 123853938 123853938 - L1-Ta germline . no 186 TRDN
srip113762 chr6 142450101 142450101 - L1-Ta germline . no 186 .
srip114873 chr6 154215663 154215663 + L1-Ta germline . no 186 .
srip115070 chr6 157968737 157968737 - L1-Ta germline . no 186 ZDHHC14
srip116176 chr7 8886715 8886715 + L1-Ta germline . no 186 .
srip116373 chr7 17094714 17094714 + L1-Ta germline . no 186 .
srip117004 chr7 42529864 42529864 - L1-Ta germline . no 186 .
srip117929 chr7 61079049 61079049 + L1-Ta germline . no 186 .
srip117960 chr7 61778308 61778308 - L1-Ta germline . no 186 .
srip118183 chr7 62492930 62492930 + L1-Ta germline . no 186 .
srip119849 chr7 84901724 84901724 - L1-Ta germline . no 186 .
srip120221 chr7 85044737 85044737 + L1-Ta germline . no 186 .
srip121178 chr7 107410719 107410719 - L1-Ta germline . no 186 SLC26A3
srip121783 chr7 107829263 107829263 + L1-Ta germline . no 186 NRCAM
srip122458 chr7 112789623 112789623 - L1-Ta germline . no 186 .
srip124036 chr8 4452894 4452894 - L1-Ta germline . no 186 CSMD1
srip124550 chr8 5829283 5829283 - L1-Ta germline . no 186 .
srip126912 chr8 67381885 67381885 - L1-Ta germline . no 186 .
srip126939 chr8 67758156 67758156 - L1-Ta germline . no 186 C8orf44-SGK3;SGK3
srip127321 chr8 72399221 72399221 - L1-Ta germline . no 186 .
srip128012 chr8 83740679 83740679 + L1-Ta germline . no 186 .
srip128232 chr8 87315040 87315040 + L1-Ta germline . no 186 .
srip128765 chr8 107557032 107557032 - L1-Ta germline . no 186 OXR1
srip128846 chr8 111632621 111632621 + L1-Ta germline . no 186 .
srip129153 chr8 115788580 115788580 - L1-Ta germline . no 186 .
srip129486 chr8 115881781 115881781 + L1-Ta germline . no 186 .
srip130101 chr8 131041219 131041219 + L1-Ta germline . no 186 .
srip130349 chr8 134972242 134972242 + L1-pre-Ta germline . no 186 .
srip131129 chr9 6290494 6290494 + L1-Ta germline . no 186 .
srip133436 chr9 32463894 32463894 - L1-Ta germline . no 186 DDX58
srip133669 chr9 35883708 35883708 + L1-Ta germline . no 186 .
srip135041 chr9 105073654 105073654 + L1-Ta germline . no 186 .
srip135980 chr9 118083880 118083880 - L1-Ta germline . no 186 DEC1
srip136059 chr9 124790572 124790572 + L1-Ta germline . no 186 TTLL11
srip136156 chr9 136105857 136105857 - L1-Ta germline . no 186 .
srip136288 chrX 4659603 4659603 - L1-Ta germline . no 186 .
srip137082 chrX 53798489 53798489 - L1-Ta germline . no 186 LOC100128454
srip137587 chrX 55585160 55585160 - L1-Ta germline . no 186 .
srip138333 chrX 66982754 66982754 - L1-Ta germline . no 186 .
srip139420 chrX 85781782 85781782 + L1-Ta germline . no 186 DACH2
srip140074 chrX 102363174 102363174 + L1-Ta germline . no 186 .
srip140297 chrX 111229559 111229559 - L1-Ta germline . no 186 TRPC5
srip141394 chrX 129525281 129525281 - L1-Ta germline . no 186 .
srip142169 chrX 154790189 154790189 + L1-Ta germline . no 186 TMLHE