euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

234 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip507 chr1 42483961 42483961 + L1-Ta germline . no 180 HIVEP3
srip683 chr1 50682736 50682736 + L1-Ta germline . no 180 .
srip691 chr1 52669191 52669191 - L1-Ta germline . no 180 ZFYVE9
srip739 chr1 56268665 56268665 - L1-Ta germline . no 180 .
srip841 chr1 56405398 56405398 - L1-Ta germline . no 180 LOC100507652
srip1595 chr1 71248609 71248609 + L1-Ta germline . no 180 .
srip1989 chr1 81855783 81855783 + L1-Ta germline . no 180 .
srip3888 chr1 119553352 119553352 + L1-Ta germline . no 180 .
srip3926 chr1 121354774 121354774 + L1-Ta germline . no 180 .
srip4028 chr1 149216797 149216797 + L1-Ta germline . no 180 .
srip4175 chr1 152443898 152443898 - L1-Ta germline validated no 180 .
srip4738 chr1 165553136 165553136 - L1-Ta germline . no 180 .
srip5027 chr1 169524859 169524859 + L1-Ta germline . no 180 F5
srip5405 chr1 179575362 179575362 - L1-Ta germline . no 180 TDRD5
srip5544 chr1 183969672 183969672 - L1-Ta germline . no 180 GLT25D2
srip5799 chr1 190973018 190973018 - L1-Ta germline . no 180 .
srip6353 chr1 207579511 207579511 + L1-Ta germline . no 180 .
srip7399 chr1 242311577 242311577 + L1-Ta germline validated no 180 PLD5
srip7771 chr10 16031588 16031588 + L1-Ta germline . no 180 .
srip8410 chr10 25707687 25707687 - L1-Ta germline . no 180 GPR158
srip8641 chr10 27775762 27775762 + L1-Ta germline . no 180 .
srip8660 chr10 28259909 28259909 + L1-Ta germline . no 180 ARMC4
srip9474 chr10 68178133 68178133 + L1-Ta germline . no 180 CTNNA3
srip9672 chr10 74767506 74767506 - L1-Ta germline . no 180 P4HA1
srip10582 chr10 91717634 91717634 - L1-Ta germline . no 180 .
srip11197 chr10 110453470 110453470 + L1-Ta germline . no 180 .
srip11384 chr10 117320227 117320227 - L1-Ta germline . no 180 ATRNL1
srip11851 chr10 124455231 124455231 + L1-Ta germline . no 180 .
srip12320 chr11 10042438 10042438 - L1-Ta germline . no 180 SBF2
srip13242 chr11 29874260 29874260 - L1-Ta germline . no 180 .
srip13779 chr11 33670123 33670123 + L1-Ta germline . no 180 C11orf41
srip14348 chr11 41831811 41831811 - L1-Ta germline . no 180 .
srip14746 chr11 48360753 48360753 - L1-Ta germline . no 180 .
srip15036 chr11 50399980 50399980 - L1-Ta germline . no 180 .
srip17756 chr11 104556130 104556130 - L1-Ta germline . no 180 .
srip18036 chr11 110377879 110377879 - L1-Ta germline . no 180 .
srip18516 chr11 123241794 123241794 + L1-Ta germline . no 180 .
srip18599 chr11 128367821 128367821 - L1-Ta germline . no 180 ETS1
srip19304 chr11 134305648 134305648 - L1-Ta germline . no 180 .
srip20357 chr12 20346841 20346841 - L1-Ta germline . no 180 .
srip20706 chr12 28226413 28226413 - L1-Ta germline . no 180 .
srip21736 chr12 38035076 38035076 + L1-Ta germline . no 180 .
srip22246 chr12 43256986 43256986 - L1-Ta germline . no 180 .
srip22820 chr12 48929052 48929052 + L1-Ta germline . no 180 .
srip22964 chr12 55782238 55782238 + L1-Ta germline . no 180 OR6C66P
srip25119 chr12 95808527 95808527 - L1-Ta germline . no 180 .
srip25992 chr12 118186926 118186926 + L1-Ta germline . no 180 KSR2
srip27476 chr13 27488126 27488126 + L1-Ta germline . no 180 .
srip27651 chr13 36582296 36582296 - L1-Ta germline . no 180 DCLK1
srip27857 chr13 38742108 38742108 + L1-Ta germline . no 180 .
srip28240 chr13 49521713 49521713 + L1-Ta germline . no 180 .
srip28329 chr13 55238031 55238031 + L1-Ta germline . no 180 .
srip28336 chr13 57221666 57221666 - L1-Ta germline . no 180 .
srip29037 chr13 61462336 61462336 - L1-Ta germline . no 180 .
srip29610 chr13 61734485 61734485 + L1-Ta germline . no 180 .
srip29753 chr13 64569855 64569855 - L1-Ta germline . no 180 .
srip30386 chr13 72968682 72968682 + L1-Ta germline . no 180 .
srip31007 chr13 79259793 79259793 - L1-Ta germline . no 180 .
srip31415 chr13 85871602 85871602 - L1-Ta germline . no 180 .
srip32005 chr13 86340153 86340153 - L1-Ta germline . no 180 .
srip32299 chr13 91149409 91149409 - L1-Ta germline . no 180 .
srip33482 chr13 104296223 104296223 - L1-Ta germline . no 180 .
srip33639 chr13 104395943 104395943 - L1-Ta germline . no 180 .
srip33781 chr13 105280146 105280146 - L1-Ta germline . no 180 .
srip34274 chr14 19000969 19000969 + L1-Ta germline . no 180 .
srip34590 chr14 26787480 26787480 - L1-Ta germline . no 180 .
srip35237 chr14 28301261 28301261 + L1-Ta germline . no 180 .
srip36071 chr14 37769602 37769602 - L1-Ta germline . no 180 MIPOL1
srip37139 chr14 52667758 52667758 - L1-Ta germline . no 180 .
srip37603 chr14 60669254 60669254 - L1-Ta germline . no 180 .
srip37647 chr14 63348479 63348479 + L1-Ta germline . no 180 KCNH5
srip37848 chr14 67419863 67419863 - L1-Ta germline . no 180 GPHN
srip38149 chr14 71197799 71197799 + L1-Ta germline . no 180 MAP3K9
srip38602 chr14 86381796 86381796 - L1-Ta germline . no 180 .
srip39327 chr15 28175791 28175791 - L1-Ta germline . no 180 OCA2
srip39503 chr15 34031839 34031839 - L1-Ta germline . no 180 RYR3
srip40205 chr15 47507329 47507329 - L1-Ta germline . no 180 SEMA6D
srip41694 chr15 62064901 62064901 + L1-Ta germline . no 180 .
srip43388 chr15 100931161 100931161 - L1-Ta germline . no 180 .
srip44764 chr16 32523893 32523893 - L1-Ta germline . no 180 .
srip45044 chr16 32525611 32525611 - L1-Ta germline . no 180 .
srip45470 chr16 33992430 33992430 + L1-Ta germline . no 180 .
srip45859 chr16 61079188 61079188 + L1-Ta germline . no 180 .
srip46489 chr17 1503363 1503363 - L1-Ta germline . no 180 SLC43A2
srip46547 chr17 6341644 6341644 - L1-Ta germline . no 180 .
srip47751 chr17 33135413 33135413 - L1-Ta germline . no 180 .
srip47887 chr17 34272148 34272148 + L1-Ta germline . no 180 .
srip48890 chr18 12491262 12491262 + L1-Ta germline . no 180 SPIRE1
srip49072 chr18 25935379 25935379 - L1-Ta germline . no 180 .
srip49998 chr18 49216219 49216219 - L1-Ta germline . no 180 .
srip50708 chr18 51762730 51762730 - L1-Ta germline . no 180 .
srip50840 chr18 55880937 55880937 - L1-Ta germline . no 180 NEDD4L
srip51002 chr18 59579975 59579975 + L1-Ta germline . no 180 .
srip51670 chr18 74515287 74515287 - L1-Ta germline . no 180 LOC100131655
srip51814 chr18 74960068 74960068 - L1-Ta germline . no 180 .
srip52442 chr19 45444699 45444699 + L1-Ta germline . no 180 .
srip52764 chr2 6798288 6798288 - L1-Ta germline . no 180 .
srip53424 chr2 23191000 23191000 - L1-Ta germline . no 180 .
srip53943 chr2 35879359 35879359 + L1-Ta germline . no 180 .
srip54101 chr2 36381238 36381238 + L1-Ta germline . no 180 .
srip54586 chr2 42051403 42051403 + L1-Ta germline . no 180 .
srip54741 chr2 46476736 46476736 - L1-Ta germline . no 180 .
srip56235 chr2 82098043 82098043 + L1-Ta germline . no 180 .
srip57803 chr2 132868182 132868182 - L1-Ta germline . no 180 .
srip59603 chr2 156527822 156527822 + L1-Ta germline . no 180 .
srip59627 chr2 156527862 156527862 + L1-Ta germline . no 180 .
srip60548 chr2 181155237 181155237 - L1-Ta germline . no 180 .
srip60857 chr2 192009356 192009356 + L1-Ta germline . no 180 STAT4
srip62167 chr2 221503768 221503768 - L1-Ta germline . no 180 .
srip62475 chr2 233488384 233488384 + L1-Ta germline . no 180 EFHD1
srip63190 chr20 9477925 9477925 - L1-Ta germline . no 180 .
srip63441 chr20 16479495 16479495 - L1-Ta germline . no 180 KIF16B
srip64001 chr20 25844027 25844027 + L1-Ta germline . no 180 .
srip65180 chr20 52063224 52063224 + L1-Ta germline . no 180 TSHZ2
srip66250 chr21 23626191 23626191 - L1-Ta germline . no 180 .
srip66856 chr21 29069171 29069171 + L1-Ta germline . no 180 .
srip67438 chr22 22486369 22486369 - L1-Ta germline . no 180 IGL@
srip67827 chr22 22715588 22715588 + L1-Ta germline . no 180 IGL@
srip69628 chr3 656435 656435 - L1-Ta germline . no 180 .
srip70058 chr3 17409573 17409573 - L1-Ta germline . no 180 TBC1D5
srip70799 chr3 24987874 24987874 - L1-Ta germline . no 180 .
srip71687 chr3 38253607 38253607 - L1-Ta germline . no 180 OXSR1
srip71916 chr3 38626082 38626082 + L1-Ta germline . no 180 SCN5A
srip72739 chr3 55788580 55788580 + L1-Ta germline . no 180 ERC2
srip72777 chr3 56401305 56401305 - L1-Ta germline . no 180 ERC2
srip73401 chr3 59852903 59852903 + L1-Ta germline . no 180 FHIT
srip73774 chr3 75101216 75101216 + L1-Ta germline . no 180 .
srip74423 chr3 80590163 80590163 - L1-Ta germline . no 180 .
srip74705 chr3 81990993 81990993 - L1-Ta germline . no 180 .
srip75603 chr3 85576568 85576568 + L1-Ta germline . no 180 CADM2
srip76433 chr3 105316337 105316337 + L1-Ta germline . no 180 .
srip76806 chr3 119046413 119046413 + L1-Ta germline . no 180 ARHGAP31
srip77269 chr3 123590726 123590726 + L1-Ta germline . no 180 MYLK
srip78297 chr3 144879645 144879645 - L1-Ta germline . no 180 .
srip78588 chr3 151148544 151148544 - L1-Ta germline . no 180 MED12L
srip79318 chr3 162717306 162717306 + L1-Ta germline . no 180 .
srip79681 chr3 169078079 169078079 + L1-Ta germline . no 180 MECOM
srip79880 chr3 169269964 169269964 + L1-Ta germline . no 180 MECOM
srip80384 chr3 176091333 176091333 + L1-Ta germline . no 180 .
srip80446 chr3 180091672 180091672 + L1-Ta germline . no 180 .
srip81509 chr3 186372141 186372141 + L1-Ta germline . no 180 .
srip81634 chr3 187835309 187835309 - L1-Ta germline . no 180 .
srip82131 chr3 193354175 193354175 - L1-Ta germline . no 180 OPA1
srip83333 chr4 20246382 20246382 + L1-Ta germline . no 180 .
srip84874 chr4 47007790 47007790 - L1-Ta germline . no 180 .
srip85822 chr4 58917529 58917529 - L1-Ta germline . no 180 .
srip86979 chr4 71093301 71093301 + L1-Ta germline . no 180 C4orf7
srip87816 chr4 85317459 85317459 - L1-Ta germline . no 180 .
srip87830 chr4 85317475 85317475 - L1-Ta germline . no 180 .
srip89985 chr4 112628973 112628973 + L1-Ta germline . no 180 .
srip90287 chr4 115132695 115132695 + L1-Ta germline . no 180 .
srip91085 chr4 125230273 125230273 + L1-Ta germline . no 180 .
srip91301 chr4 130601435 130601435 - L1-Ta germline . no 180 .
srip92214 chr4 134596423 134596423 + L1-Ta germline . no 180 .
srip92763 chr4 138177325 138177325 + L1-Ta germline . no 180 .
srip92891 chr4 140647779 140647779 - L1-Ta germline . no 180 MGST2;MAML3
srip93099 chr4 147225296 147225296 + L1-Ta germline . no 180 SLC10A7
srip94034 chr4 165231730 165231730 - L1-Ta germline . no 180 MARCH1
srip96045 chr5 8749515 8749515 + L1-Ta germline . no 180 .
srip96786 chr5 16883042 16883042 - L1-Ta germline . no 180 MYO10
srip96904 chr5 21207732 21207732 + L1-Ta germline . no 180 .
srip97217 chr5 26093140 26093140 + L1-Ta germline . no 180 .
srip97945 chr5 33633348 33633348 - L1-Ta germline . no 180 ADAMTS12
srip98028 chr5 33797544 33797544 - L1-Ta germline . no 180 ADAMTS12
srip98593 chr5 46396964 46396964 + L1-Ta germline . no 180 .
srip99108 chr5 57279517 57279517 + L1-Ta germline . no 180 .
srip99760 chr5 83619783 83619783 - L1-Ta germline . no 180 EDIL3
srip100758 chr5 89450781 89450781 + L1-Ta germline . no 180 .
srip101057 chr5 96866407 96866407 + L1-Ta germline . no 180 .
srip102244 chr5 109480258 109480258 - L1-Ta germline . no 180 .
srip103582 chr5 132977632 132977632 - L1-Ta germline . no 180 .
srip103759 chr5 137014775 137014775 - L1-Ta germline . no 180 KLHL3
srip103977 chr5 142547048 142547048 + L1-Ta germline . no 180 ARHGAP26
srip104223 chr5 144331013 144331013 - L1-Ta germline . no 180 .
srip104832 chr5 154873933 154873933 - L1-Ta germline . no 180 .
srip105222 chr5 155619865 155619865 + L1-Ta germline . no 180 .
srip105568 chr5 159351199 159351199 - L1-Ta germline . no 180 ADRA1B
srip107078 chr6 13191033 13191033 + L1-Ta germline . no 180 PHACTR1
srip107539 chr6 13503049 13503049 + L1-Ta germline . no 180 .
srip107922 chr6 32358915 32358915 + L1-Ta germline . no 180 .
srip107943 chr6 32457289 32457289 + L1-Ta germline . no 180 .
srip108264 chr6 45852697 45852697 - L1-Ta germline . no 180 .
srip108661 chr6 46310291 46310291 + L1-Ta germline . no 180 .
srip109179 chr6 61942547 61942547 - L1-Ta germline . no 180 .
srip109544 chr6 63368207 63368207 + L1-Ta germline . no 180 .
srip109943 chr6 68112755 68112755 - L1-Ta germline . no 180 .
srip111067 chr6 77980650 77980650 - L1-Ta germline . no 180 .
srip111298 chr6 81293578 81293578 - L1-Ta germline . no 180 .
srip112171 chr6 91669521 91669521 - L1-Ta germline . no 180 .
srip112395 chr6 98652124 98652124 - L1-pre-Ta germline . no 180 .
srip112795 chr6 102846086 102846086 - L1-Ta germline . no 180 .
srip113759 chr6 142450101 142450101 - L1-Ta germline . no 180 .
srip114723 chr6 148195789 148195789 + L1-Ta germline . no 180 .
srip114867 chr6 154215663 154215663 + L1-Ta germline . no 180 .
srip115064 chr6 157968737 157968737 - L1-Ta germline . no 180 ZDHHC14
srip115549 chr6 162181257 162181257 + L1-Ta germline . no 180 PARK2
srip116172 chr7 8886715 8886715 + L1-Ta germline . no 180 .
srip116371 chr7 17094714 17094714 + L1-Ta germline . no 180 .
srip117473 chr7 52789472 52789472 + L1-Ta germline . no 180 .
srip117708 chr7 56543635 56543635 - L1-Ta germline . no 180 .
srip117954 chr7 61778308 61778308 - L1-Ta germline . no 180 .
srip118177 chr7 62492930 62492930 + L1-Ta germline . no 180 .
srip118869 chr7 70188676 70188676 - L1-Ta germline . no 180 AUTS2
srip119845 chr7 84901724 84901724 - L1-Ta germline . no 180 .
srip120217 chr7 85044737 85044737 + L1-Ta germline . no 180 .
srip121777 chr7 107829263 107829263 + L1-Ta germline . no 180 NRCAM
srip122242 chr7 110484749 110484749 + L1-Ta germline . no 180 IMMP2L
srip122637 chr7 122124545 122124545 + L1-Ta germline . no 180 CADPS2
srip124032 chr8 4452894 4452894 - L1-Ta germline . no 180 CSMD1
srip124544 chr8 5829283 5829283 - L1-Ta germline . no 180 .
srip125410 chr8 24926545 24926545 - L1-Ta germline . no 180 .
srip126606 chr8 66276841 66276841 + L1-Ta germline . no 180 .
srip126906 chr8 67381885 67381885 - L1-Ta germline . no 180 .
srip128228 chr8 87315040 87315040 + L1-Ta germline . no 180 .
srip128715 chr8 100661127 100661127 - L1-Ta germline . no 180 VPS13B
srip128759 chr8 107557032 107557032 - L1-Ta germline . no 180 OXR1
srip130097 chr8 131041219 131041219 + L1-Ta germline . no 180 .
srip131125 chr9 6290494 6290494 + L1-Ta germline . no 180 .
srip131539 chr9 9236600 9236600 + L1-Ta germline . no 180 PTPRD
srip132617 chr9 30674468 30674468 - L1-Ta germline . no 180 .
srip132927 chr9 32092748 32092748 - L1-Ta germline . no 180 .
srip133430 chr9 32463894 32463894 - L1-Ta germline . no 180 DDX58
srip133663 chr9 35883708 35883708 + L1-Ta germline . no 180 .
srip133951 chr9 72777411 72777411 - L1-Ta germline . no 180 LOC100507244;MAMDC2
srip136047 chr9 121763133 121763133 - L1-Ta germline . no 180 .
srip136770 chrX 24384651 24384651 - L1-Ta germline . no 180 .
srip136941 chrX 43630877 43630877 - L1-Ta germline . no 180 MAOB
srip137337 chrX 55264652 55264652 - L1-Ta germline . no 180 .
srip137583 chrX 55585160 55585160 - L1-Ta germline . no 180 .
srip138330 chrX 66982754 66982754 - L1-Ta germline . no 180 .
srip139131 chrX 79237289 79237289 + L1-Ta germline . no 180 .
srip140736 chrX 119892831 119892831 - L1-Ta germline . no 180 .
srip141469 chrX 130495439 130495439 - L1-Ta germline . no 180 .
srip141957 chrX 140515258 140515258 - L1-Ta germline . no 180 .