euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

241 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip59 chr1 14163093 14163093 + L1-Ta germline . no 175 .
srip502 chr1 42483961 42483961 + L1-Ta germline . no 175 HIVEP3
srip836 chr1 56405398 56405398 - L1-Ta germline . no 175 LOC100507652
srip1984 chr1 81855783 81855783 + L1-Ta germline . no 175 .
srip3132 chr1 104646045 104646045 + L1-Ta germline . no 175 .
srip5024 chr1 169524859 169524859 + L1-Ta germline . no 175 F5
srip5539 chr1 183969672 183969672 - L1-Ta germline . no 175 GLT25D2
srip6348 chr1 207579511 207579511 + L1-Ta germline . no 175 .
srip6944 chr1 222579116 222579116 - L1-Ta germline . no 175 .
srip7394 chr1 242311577 242311577 + L1-Ta germline validated no 175 PLD5
srip7447 chr1 248454039 248454039 - L1-pre-Ta germline . no 175 .
srip7783 chr10 16709572 16709572 - L1-Ta germline . no 175 RSU1
srip8405 chr10 25707687 25707687 - L1-Ta germline . no 175 GPR158
srip8763 chr10 35420842 35420842 - L1-Ta germline . no 175 CREM
srip8896 chr10 53063103 53063103 - L1-Ta germline . no 175 PRKG1
srip9667 chr10 74767506 74767506 - L1-Ta germline . no 175 P4HA1
srip11192 chr10 110453470 110453470 + L1-Ta germline . no 175 .
srip13774 chr11 33670123 33670123 + L1-Ta germline . no 175 C11orf41
srip13901 chr11 37666899 37666899 + L1-Ta germline . no 175 .
srip13958 chr11 39929856 39929856 + L1-Ta germline . no 175 .
srip14343 chr11 41831811 41831811 - L1-Ta germline . no 175 .
srip14741 chr11 48360753 48360753 - L1-Ta germline . no 175 .
srip17751 chr11 104556130 104556130 - L1-Ta germline . no 175 .
srip18033 chr11 110377879 110377879 - L1-Ta germline . no 175 .
srip19299 chr11 134305648 134305648 - L1-Ta germline . no 175 .
srip20153 chr12 12933694 12933694 - L1-Ta germline . no 175 APOLD1
srip20703 chr12 28226413 28226413 - L1-Ta germline . no 175 .
srip22411 chr12 43390135 43390135 - L1-Ta germline . no 175 .
srip22859 chr12 50063635 50063635 + L1-Ta germline . no 175 FMNL3
srip23028 chr12 63569179 63569179 + L1-Ta germline . no 175 .
srip24416 chr12 84955216 84955216 - L1-Ta germline . no 175 .
srip24907 chr12 85506290 85506290 + L1-Ta germline . no 175 LRRIQ1
srip25114 chr12 95808527 95808527 - L1-Ta germline . no 175 .
srip25989 chr12 118186926 118186926 + L1-Ta germline . no 175 KSR2
srip26351 chr12 126802929 126802929 - L1-Ta germline . no 175 .
srip26647 chr12 129350781 129350781 - L1-Ta germline . no 175 GLT1D1
srip26756 chr13 21817193 21817193 - L1-Ta germline . no 175 .
srip28433 chr13 58556528 58556528 + L1-Ta germline . no 175 .
srip29034 chr13 61462336 61462336 - L1-Ta germline . no 175 .
srip29605 chr13 61734485 61734485 + L1-Ta germline . no 175 .
srip29786 chr13 64732415 64732415 - L1-Ta germline . no 175 .
srip31002 chr13 79259793 79259793 - L1-Ta germline . no 175 .
srip31194 chr13 83284212 83284212 + L1-Ta germline . no 175 .
srip31410 chr13 85871602 85871602 - L1-Ta germline . no 175 .
srip32745 chr13 96834839 96834839 + L1-Ta germline . no 175 HS6ST3
srip33477 chr13 104296223 104296223 - L1-Ta germline . no 175 .
srip33634 chr13 104395943 104395943 - L1-Ta germline . no 175 .
srip33776 chr13 105280146 105280146 - L1-Ta germline . no 175 .
srip34050 chr13 107845347 107845347 + L1-Ta germline . no 175 FAM155A
srip36015 chr14 36674760 36674760 + L1-Ta germline . no 175 .
srip36068 chr14 37769602 37769602 - L1-Ta germline . no 175 MIPOL1
srip36376 chr14 40689232 40689232 + L1-Ta germline . no 175 .
srip37134 chr14 52667758 52667758 - L1-Ta germline . no 175 .
srip37843 chr14 67419863 67419863 - L1-Ta germline . no 175 GPHN
srip37943 chr14 68784244 68784244 + L1-Ta germline . no 175 RAD51B
srip38289 chr14 72333719 72333719 - L1-Ta germline . no 175 .
srip39500 chr15 34031839 34031839 - L1-Ta germline . no 175 RYR3
srip40200 chr15 47507329 47507329 - L1-Ta germline . no 175 SEMA6D
srip40730 chr15 51843819 51843819 + L1-Ta germline . no 175 DMXL2
srip41016 chr15 55129551 55129551 + L1-Ta germline . no 175 .
srip41237 chr15 56251153 56251153 + L1-Ta germline . no 175 NEDD4
srip41640 chr15 61328974 61328974 - L1-Ta germline . no 175 RORA
srip43383 chr15 100931161 100931161 - L1-Ta germline . no 175 .
srip43631 chr16 6793831 6793831 + L1-Ta germline . no 175 RBFOX1
srip44077 chr16 17755305 17755305 - L1-Ta germline . no 175 .
srip44523 chr16 27425927 27425927 - L1-Ta germline . no 175 IL21R
srip44760 chr16 32523893 32523893 - L1-Ta germline . no 175 .
srip45039 chr16 32525611 32525611 - L1-Ta germline . no 175 .
srip45465 chr16 33992430 33992430 + L1-Ta germline . no 175 .
srip45575 chr16 51803074 51803074 + L1-Ta germline . no 175 .
srip45854 chr16 61079188 61079188 + L1-Ta germline . no 175 .
srip46460 chr16 86017853 86017853 - L1-Ta germline . no 175 .
srip47343 chr17 28398313 28398313 + L1-Ta germline . no 175 EFCAB5
srip47776 chr17 33835798 33835798 - L1-Ta germline . no 175 .
srip47884 chr17 34272148 34272148 + L1-Ta germline . no 175 .
srip47965 chr17 58587394 58587394 + L1-Ta germline . no 175 APPBP2
srip48887 chr18 12491262 12491262 + L1-Ta germline . no 175 SPIRE1
srip49429 chr18 28732902 28732902 - L1-Ta germline . no 175 DSC1
srip50338 chr18 51425726 51425726 - L1-Ta germline . no 175 .
srip50706 chr18 51762730 51762730 - L1-Ta germline . no 175 .
srip53421 chr2 23191000 23191000 - L1-Ta germline . no 175 .
srip53940 chr2 35879359 35879359 + L1-Ta germline . no 175 .
srip54404 chr2 41913652 41913652 - L1-Ta germline . no 175 .
srip54761 chr2 49386669 49386669 - L1-Ta germline validated no 175 .
srip54907 chr2 53460052 53460052 + L1-Ta germline . no 175 .
srip55295 chr2 69168896 69168896 - L1-Ta germline . no 175 .
srip56491 chr2 83188325 83188325 + L1-Ta germline . no 175 .
srip56897 chr2 106163164 106163164 + L1-Ta germline . no 175 .
srip57655 chr2 129372166 129372166 + L1-Ta germline . no 175 .
srip57800 chr2 132868182 132868182 - L1-Ta germline . no 175 .
srip59490 chr2 154100589 154100589 - L1-Ta germline . no 175 .
srip59848 chr2 170504673 170504673 + L1-Ta germline . no 175 C2orf77
srip60122 chr2 178676245 178676245 - L1-Ta germline . no 175 PDE11A
srip60483 chr2 181000540 181000540 + L1-Ta germline . no 175 .
srip61044 chr2 199454701 199454701 + L1-Ta germline . no 175 .
srip61681 chr2 213114174 213114174 + L1-Ta germline . no 175 ERBB4
srip62463 chr2 232482740 232482740 + L1-Ta germline . no 175 .
srip62607 chr2 235519794 235519794 + L1-Ta germline . no 175 .
srip62733 chr20 1231070 1231070 - L1-Ta germline . no 175 RAD21L1
srip65610 chr21 17134462 17134462 + L1-Ta germline . no 175 USP25
srip66248 chr21 23626191 23626191 - L1-Ta germline . no 175 .
srip67244 chr22 19210913 19210913 + L1-Ta germline . no 175 CLTCL1
srip67824 chr22 22715588 22715588 + L1-Ta germline . no 175 IGL@
srip67883 chr22 26507199 26507199 - L1-Ta germline . no 175 .
srip70053 chr3 17409573 17409573 - L1-Ta germline . no 175 TBC1D5
srip70441 chr3 20748896 20748896 - L1-Ta germline . no 175 .
srip70615 chr3 21800882 21800882 + L1-Ta germline . no 175 .
srip70814 chr3 25278891 25278891 - L1-Ta germline . no 175 .
srip71151 chr3 26524464 26524464 - L1-Ta germline . no 175 .
srip71913 chr3 38626082 38626082 + L1-Ta germline . no 175 SCN5A
srip72734 chr3 55788580 55788580 + L1-Ta germline . no 175 ERC2
srip72775 chr3 56401305 56401305 - L1-Ta germline . no 175 ERC2
srip73398 chr3 59852903 59852903 + L1-Ta germline . no 175 FHIT
srip73533 chr3 69181542 69181542 - L1-Ta germline . no 175 .
srip73551 chr3 73639420 73639420 + L1-Ta germline validated no 175 PDZRN3
srip73553 chr3 73639470 73639470 + L1-Ta germline . no 175 PDZRN3
srip74288 chr3 79758825 79758825 - L1-Ta germline . no 175 ROBO1
srip74841 chr3 82144854 82144854 - L1-Ta germline . no 175 .
srip74961 chr3 83613997 83613997 + L1-Ta germline . no 175 .
srip75670 chr3 85663354 85663354 - L1-Ta germline . no 175 CADM2
srip75827 chr3 86264950 86264950 - L1-Ta germline . no 175 .
srip76428 chr3 105316337 105316337 + L1-Ta germline . no 175 .
srip76609 chr3 109751770 109751770 + L1-Ta germline . no 175 .
srip76691 chr3 111275065 111275065 + L1-Ta germline . no 175 CD96
srip76801 chr3 119046413 119046413 + L1-Ta germline . no 175 ARHGAP31
srip77265 chr3 123590726 123590726 + L1-Ta germline . no 175 MYLK
srip77498 chr3 131069779 131069779 + L1-Ta germline . no 175 LOC339874
srip78139 chr3 143121759 143121759 - L1-Ta germline . no 175 SLC9A9
srip78583 chr3 151148544 151148544 - L1-Ta germline . no 175 MED12L
srip79313 chr3 162717306 162717306 + L1-Ta germline . no 175 .
srip79679 chr3 168979548 168979548 + L1-Ta germline . no 175 MECOM
srip79936 chr3 172749118 172749118 - L1-Ta germline . no 175 SPATA16
srip80379 chr3 176091333 176091333 + L1-Ta germline . no 175 .
srip81629 chr3 187835309 187835309 - L1-Ta germline . no 175 .
srip83328 chr4 20246382 20246382 + L1-Ta germline . no 175 .
srip83380 chr4 22240607 22240607 + L1-Ta germline . no 175 .
srip84869 chr4 47007790 47007790 - L1-Ta germline . no 175 .
srip85819 chr4 58917529 58917529 - L1-Ta germline . no 175 .
srip86132 chr4 61999375 61999375 + L1-Ta germline . no 175 .
srip86310 chr4 66809050 66809050 - L1-Ta germline . no 175 .
srip86352 chr4 66809078 66809078 - L1-Ta germline . no 175 .
srip86416 chr4 68033656 68033656 + L1-Ta germline . no 175 .
srip86607 chr4 69572737 69572737 - L1-Ta germline . no 175 LOC728811
srip87217 chr4 80768518 80768518 + L1-Ta germline . no 175 GDEP
srip87348 chr4 80768541 80768541 + L1-Ta germline . no 175 GDEP
srip87756 chr4 85249967 85249967 + L1-Ta germline . no 175 .
srip87838 chr4 85432011 85432011 + L1-Ta germline . no 175 .
srip88813 chr4 103343746 103343746 + L1-Ta germline . no 175 .
srip89587 chr4 110248316 110248316 - L1-Ta germline . no 175 .
srip89660 chr4 110248332 110248332 - L1-Ta germline . no 175 .
srip89982 chr4 112628973 112628973 + L1-Ta germline . no 175 .
srip90410 chr4 117041347 117041347 + L1-Ta germline . no 175 .
srip90427 chr4 117151977 117151977 + L1-Ta germline . no 175 .
srip90700 chr4 118765255 118765255 + L1-Ta germline . no 175 .
srip90822 chr4 120717544 120717544 - L1-Ta germline . no 175 .
srip92758 chr4 138177325 138177325 + L1-Ta germline . no 175 .
srip92914 chr4 146927741 146927741 - L1-Ta germline . no 175 .
srip93095 chr4 147225296 147225296 + L1-Ta germline . no 175 SLC10A7
srip95068 chr4 182418058 182418058 - L1-Ta germline . no 175 .
srip96351 chr5 11391276 11391276 + L1-Ta germline . no 175 CTNND2
srip96783 chr5 16883042 16883042 - L1-Ta germline . no 175 MYO10
srip97940 chr5 33633348 33633348 - L1-Ta germline . no 175 ADAMTS12
srip98307 chr5 41428535 41428535 + L1-Ta germline . no 175 PLCXD3
srip98589 chr5 46396964 46396964 + L1-Ta germline . no 175 .
srip99105 chr5 57279517 57279517 + L1-Ta germline . no 175 .
srip99188 chr5 65438345 65438345 - L1-Ta germline . no 175 .
srip99759 chr5 83619783 83619783 - L1-Ta germline . no 175 EDIL3
srip100070 chr5 84239673 84239673 - L1-Ta germline . no 175 .
srip100753 chr5 89450781 89450781 + L1-Ta germline . no 175 .
srip101054 chr5 96866407 96866407 + L1-Ta germline . no 175 .
srip102239 chr5 109480258 109480258 - L1-Ta germline . no 175 .
srip102516 chr5 109567542 109567542 + L1-Ta germline . no 175 .
srip102749 chr5 113568828 113568828 - L1-Ta germline . no 175 .
srip104006 chr5 143413889 143413889 + L1-Ta germline . no 175 .
srip104220 chr5 144331013 144331013 - L1-Ta germline . no 175 .
srip104889 chr5 155333908 155333908 - L1-Ta germline . no 175 .
srip105219 chr5 155619865 155619865 + L1-Ta germline . no 175 .
srip105779 chr5 162819864 162819864 + L1-Ta germline . no 175 .
srip107074 chr6 13191033 13191033 + L1-Ta germline . no 175 PHACTR1
srip107534 chr6 13503049 13503049 + L1-Ta germline . no 175 .
srip107611 chr6 16950834 16950834 - L1-Ta germline . no 175 .
srip107624 chr6 16950957 16950957 - L1-Ta germline . no 175 .
srip108081 chr6 32613444 32613444 + L1-Ta germline . no 175 .
srip108261 chr6 45852697 45852697 - L1-Ta germline . no 175 .
srip108658 chr6 46310291 46310291 + L1-Ta germline . no 175 .
srip108949 chr6 56729315 56729315 - L1-Ta germline . no 175 LOC100652827
srip109938 chr6 68112755 68112755 - L1-Ta germline . no 175 .
srip110667 chr6 77379922 77379922 - L1-Ta germline . no 175 .
srip111063 chr6 77980650 77980650 - L1-Ta germline . no 175 .
srip111201 chr6 78649689 78649689 - L1-Ta germline . no 175 .
srip112166 chr6 91669521 91669521 - L1-Ta germline . no 175 .
srip112281 chr6 91767655 91767655 + L1-Ta germline . no 175 .
srip112871 chr6 108786928 108786928 - L1-Ta germline . no 175 LACE1
srip114438 chr6 148163587 148163587 + L1-Ta germline . no 175 .
srip114862 chr6 154215663 154215663 + L1-Ta germline . no 175 .
srip115059 chr6 157968737 157968737 - L1-Ta germline . no 175 ZDHHC14
srip116169 chr7 8886715 8886715 + L1-Ta germline . no 175 .
srip116267 chr7 13620657 13620657 + L1-Ta germline . no 175 .
srip116408 chr7 20170322 20170322 + L1-Ta germline . no 175 .
srip116429 chr7 22416950 22416950 - L1-Ta germline . no 175 .
srip117001 chr7 42529864 42529864 - L1-Ta germline . no 175 .
srip117073 chr7 45485689 45485689 + L1-Ta germline . no 175 .
srip117470 chr7 52789472 52789472 + L1-Ta germline . no 175 .
srip118332 chr7 64086052 64086052 + L1-Ta germline . no 175 .
srip118535 chr7 68194507 68194507 - L1-Ta germline . no 175 .
srip118864 chr7 70188676 70188676 - L1-Ta germline . no 175 AUTS2
srip119840 chr7 84901724 84901724 - L1-Ta germline . no 175 .
srip121772 chr7 107829263 107829263 + L1-Ta germline . no 175 NRCAM
srip122237 chr7 110484749 110484749 + L1-Ta germline . no 175 IMMP2L
srip123121 chr7 134068985 134068985 + L1-Ta germline . no 175 .
srip125407 chr8 24926545 24926545 - L1-Ta germline . no 175 .
srip126398 chr8 58347940 58347940 + L1-Ta germline . no 175 .
srip126901 chr8 67381885 67381885 - L1-Ta germline . no 175 .
srip126936 chr8 67758156 67758156 - L1-Ta germline . no 175 C8orf44-SGK3;SGK3
srip127314 chr8 72399221 72399221 - L1-Ta germline . no 175 .
srip127572 chr8 75723722 75723722 + L1-Ta germline . no 175 .
srip128007 chr8 83740679 83740679 + L1-Ta germline . no 175 .
srip128754 chr8 107557032 107557032 - L1-Ta germline . no 175 OXR1
srip128811 chr8 109649041 109649041 + L1-Ta germline . no 175 .
srip128841 chr8 111632621 111632621 + L1-Ta germline . no 175 .
srip129009 chr8 115773126 115773126 + L1-Ta germline . no 175 .
srip129148 chr8 115788580 115788580 - L1-Ta germline . no 175 .
srip130345 chr8 134972242 134972242 + L1-pre-Ta germline . no 175 .
srip130465 chr8 140145235 140145235 - L1-Ta germline . no 175 .
srip130565 chr9 4265400 4265400 + L1-Ta germline . no 175 GLIS3
srip131120 chr9 6290494 6290494 + L1-Ta germline . no 175 .
srip131377 chr9 7741406 7741406 + L1-Ta germline . no 175 .
srip131536 chr9 9236600 9236600 + L1-Ta germline . no 175 PTPRD
srip133658 chr9 35883708 35883708 + L1-Ta germline . no 175 .
srip134013 chr9 74896659 74896659 + L1-Ta germline . no 175 .
srip134358 chr9 91774009 91774009 + L1-Ta germline . no 175 SHC3
srip135268 chr9 106602646 106602646 - L1-Ta germline . no 175 .
srip135973 chr9 118083880 118083880 - L1-Ta germline . no 175 DEC1
srip136030 chr9 121394590 121394590 - L1-Ta germline . no 175 .
srip136524 chrX 14152012 14152012 - L1-Ta germline . no 175 .
srip136878 chrX 34810641 34810641 - L1-Ta germline . no 175 .
srip141106 chrX 123611800 123611800 + L1-Ta germline . no 175 ODZ1
srip141123 chrX 123612276 123612276 - L1-Ta germline . no 175 ODZ1
srip141954 chrX 140515258 140515258 - L1-Ta germline . no 175 .
srip141994 chrX 141955630 141955630 - L1-Ta germline . no 175 .
srip142309 chrY 13653796 13653796 - L1-Ta germline . no 175 .