euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

7 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip39102 chr15 24383900 24383900 + L1-Ta germline . yes 691 .
srip57019 chr2 108631988 108631988 - L1-Ta germline . no 691 .
srip57630 chr2 126510571 126510571 + L1-Ta germline . yes 691 .
srip59950 chr2 176346680 176346680 - L1-Ta germline . no 691 .
srip69885 chr3 4080917 4080917 - L1-Ta germline . yes 691 .
srip128538 chr8 97911008 97911008 + L1-Ta germline . yes 691 PGCP
srip131686 chr9 12556845 12556845 - L1-Ta germline . no 691 .