euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

230 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip197 chr1 31041664 31041664 + L1-Ta germline . no 685 .
srip1168 chr1 63705317 63705317 - L1-Ta germline . no 685 LINC00466
srip1194 chr1 65909392 65909392 - L1-Ta germline . no 685 LEPR
srip1661 chr1 74984526 74984526 - L1-Ta germline . no 685 FPGT-TNNI3K;TNNI3K
srip2168 chr1 86398798 86398798 + L1-Ta germline . no 685 COL24A1
srip2256 chr1 87144762 87144762 - L1-Ta germline . no 685 .
srip2605 chr1 99678977 99678977 - L1-Ta germline . no 685 .
srip2660 chr1 99854086 99854086 - L1-Ta germline . no 685 .
srip3261 chr1 105386449 105386449 - L1-Ta germline . no 685 .
srip3989 chr1 121478354 121478354 + L1-Ta germline . yes 685 .
srip4105 chr1 149308424 149308424 + L1-Ta germline . no 685 LOC645262
srip4202 chr1 152462236 152462236 - L1-Ta germline . no 685 .
srip4305 chr1 158238664 158238664 + L1-Ta germline . yes 685 .
srip4580 chr1 163231881 163231881 - L1-Ta germline . no 685 LOC100505773
srip4847 chr1 166212290 166212290 - L1-Ta germline . yes 685 .
srip5295 chr1 179575336 179575336 - L1-Ta germline . no 685 TDRD5
srip6151 chr1 193836827 193836827 + L1-Ta germline . yes 685 .
srip6484 chr1 218182567 218182567 - L1-Ta germline . no 685 .
srip7059 chr1 228058514 228058514 - L1-Ta germline . yes 685 .
srip7622 chr10 5293335 5293335 + L1-Ta germline . yes 685 .
srip8122 chr10 23842056 23842056 - L1-Ta germline . no 685 .
srip8729 chr10 32929792 32929792 - L1-Ta germline . no 685 C10orf68
srip8829 chr10 42527965 42527965 + L1-Ta germline . no 685 .
srip8987 chr10 58863547 58863547 - L1-Ta germline . no 685 .
srip11305 chr10 110846814 110846814 + L1-Ta germline . yes 685 .
srip12628 chr11 15995864 15995864 - L1-Ta germline . no 685 SOX6
srip12715 chr11 24355519 24355519 + L1-Ta germline . yes 685 .
srip13678 chr11 33670122 33670122 + L1-Ta germline validated no 685 C11orf41
srip15537 chr11 59815986 59815986 - L1-Ta germline . no 685 .
srip16783 chr11 87051059 87051059 - L1-Ta germline . no 685 .
srip17234 chr11 94684419 94684419 + L1-Ta germline . no 685 .
srip17413 chr11 99478828 99478828 + L1-Ta germline . yes 685 CNTN5
srip20313 chr12 14335361 14335361 + L1-Ta germline . yes 685 .
srip22478 chr12 44501995 44501995 - L1-Ta germline . yes 685 TMEM117
srip23427 chr12 70167057 70167057 - L1-Ta germline . no 685 RAB3IP
srip24066 chr12 79570815 79570815 - L1-Ta germline . no 685 SYT1
srip25310 chr12 98672913 98672913 + L1-Ta germline . yes 685 .
srip27535 chr13 30215833 30215833 - L1-Ta germline . no 685 .
srip27616 chr13 33441812 33441812 - L1-Ta germline . no 685 .
srip28383 chr13 57793451 57793451 - L1-Ta germline . no 685 .
srip28489 chr13 59088395 59088395 + L1-Ta germline . no 685 .
srip28705 chr13 61462318 61462318 - L1-Ta germline . no 685 .
srip32078 chr13 86502081 86502081 + L1-Ta germline . no 685 .
srip32245 chr13 88851194 88851194 - L1-Ta germline . no 685 .
srip32473 chr13 92855881 92855881 + L1-Ta germline . yes 685 GPC5
srip33706 chr13 104704163 104704163 + L1-Ta germline . yes 685 .
srip34410 chr14 24582584 24582584 + L1-Ta germline . yes 685 .
srip36341 chr14 39875096 39875096 + L1-Ta germline validated no 685 FBXO33
srip37035 chr14 48662336 48662336 + L1-Ta germline . no 685 .
srip37106 chr14 52532174 52532174 - L1-Ta germline . no 685 NID2
srip38023 chr14 71020049 71020049 + L1-Ta germline . no 685 .
srip38132 chr14 71197779 71197779 + L1-Ta germline validated no 685 MAP3K9
srip38910 chr14 95605326 95605326 + L1-Ta germline . no 685 DICER1
srip40801 chr15 51875289 51875289 - L1-Ta germline . no 685 DMXL2
srip40860 chr15 53448042 53448042 - L1-Ta germline . no 685 .
srip41325 chr15 58012013 58012013 - L1-Ta germline . no 685 .
srip41816 chr15 71027483 71027483 + L1-Ta germline . yes 685 UACA
srip42654 chr15 88059478 88059478 + L1-Ta germline . no 685 .
srip42976 chr15 98199971 98199971 + L1-Ta germline . no 685 .
srip43596 chr16 6793830 6793830 + L1-Ta germline . no 685 RBFOX1
srip45800 chr16 60913935 60913935 + L1-Ta germline . no 685 .
srip45957 chr16 65729907 65729907 + L1-Ta germline . yes 685 .
srip46581 chr17 9525306 9525306 + L1-Ta germline . yes 685 WDR16
srip47504 chr17 32192799 32192799 + L1-Ta germline . yes 685 ACCN1
srip48733 chr18 5332408 5332408 - L1-Ta germline . no 685 .
srip49056 chr18 23067399 23067399 + L1-Ta germline . no 685 .
srip49541 chr18 30185593 30185593 - L1-Ta germline . no 685 .
srip49555 chr18 32690186 32690186 + L1-Ta germline . no 685 MAPRE2
srip49745 chr18 34567457 34567457 + L1-Ta germline . yes 685 KIAA1328
srip51065 chr18 59763726 59763726 - L1-Ta germline . no 685 PIGN
srip51149 chr18 61030433 61030433 - L1-Ta germline . no 685 KDSR
srip51232 chr18 63446487 63446487 - L1-Ta germline . no 685 CDH7
srip51303 chr18 68413712 68413712 - L1-Ta germline . no 685 .
srip51379 chr18 69024727 69024727 + L1-Ta germline . yes 685 .
srip52516 chr19 55091547 55091547 - L1-Ta germline . no 685 LILRA2
srip53608 chr2 23191016 23191016 - L1-Ta germline . no 685 .
srip54251 chr2 36570251 36570251 - L1-Ta germline . no 685 .
srip54388 chr2 41777137 41777137 - L1-Ta germline . no 685 .
srip55653 chr2 73354355 73354355 - L1-Ta germline . no 685 .
srip55968 chr2 81834768 81834768 - L1-Ta germline . no 685 .
srip56320 chr2 83068216 83068216 + L1-Ta germline . yes 685 .
srip57013 chr2 108631988 108631988 - L1-Ta germline . no 685 .
srip57416 chr2 118667183 118667183 - L1-Ta germline . no 685 .
srip57978 chr2 139785112 139785112 - L1-Ta germline . no 685 .
srip58375 chr2 142788891 142788891 - L1-Ta germline . no 685 LRP1B
srip58662 chr2 144624534 144624534 + L1-Ta germline . yes 685 .
srip59478 chr2 153864262 153864262 - L1-Ta germline . no 685 .
srip59945 chr2 176346680 176346680 - L1-Ta germline . no 685 .
srip60775 chr2 191478703 191478703 - L1-Ta germline . no 685 .
srip61339 chr2 205631655 205631655 - L1-Ta germline . no 685 PARD3B
srip61615 chr2 212707182 212707182 + L1-Ta germline . no 685 ERBB4
srip61772 chr2 214647628 214647628 - L1-Ta germline . no 685 SPAG16
srip61839 chr2 218176494 218176494 + L1-Ta germline . yes 685 DIRC3
srip63257 chr20 11619480 11619480 + L1-Ta germline . no 685 .
srip63309 chr20 12781652 12781652 - L1-Ta germline . no 685 .
srip63687 chr20 19400466 19400466 - L1-Ta germline . no 685 SLC24A3
srip63994 chr20 23412776 23412776 + L1-Ta germline . yes 685 .
srip64520 chr20 30474322 30474322 + L1-Ta germline . no 685 TTLL9
srip65902 chr21 19517309 19517309 - L1-Ta germline . no 685 .
srip66541 chr21 24125137 24125137 + L1-Ta germline . yes 685 .
srip67749 chr22 22715585 22715585 + L1-Ta germline . no 685 IGL@
srip68254 chr22 29065287 29065287 + L1-Ta germline . yes 685 TTC28
srip69702 chr3 656444 656444 - L1-Ta germline validated no 685 .
srip69767 chr3 2050178 2050178 + L1-Ta germline . yes 685 .
srip69882 chr3 4080917 4080917 - L1-Ta germline . yes 685 .
srip70643 chr3 22097802 22097802 + L1-Ta germline . no 685 LOC100505836
srip70862 chr3 25740941 25740941 - L1-Ta germline . no 685 .
srip71379 chr3 33554072 33554072 + L1-Ta germline . no 685 CLASP2
srip72134 chr3 46824583 46824583 - L1-Ta germline . no 685 .
srip73366 chr3 59852889 59852889 + L1-Ta germline . no 685 FHIT
srip73573 chr3 75005137 75005137 + L1-Ta germline . no 685 .
srip74417 chr3 80590157 80590157 - L1-Ta germline . no 685 .
srip74621 chr3 81770349 81770349 + L1-Ta germline . yes 685 GBE1
srip74991 chr3 84433383 84433383 + L1-Ta germline . no 685 .
srip76507 chr3 105473860 105473860 - L1-Ta germline . no 685 CBLB
srip76545 chr3 108474613 108474613 + L1-Ta germline . no 685 RETNLB
srip76592 chr3 108924737 108924737 + L1-Ta germline . yes 685 .
srip76676 chr3 109836400 109836400 - L1-Ta germline . no 685 .
srip77395 chr3 129972765 129972765 + L1-Ta germline . yes 685 COL6A4P2
srip77440 chr3 130352893 130352893 + L1-Ta germline . yes 685 COL6A6
srip78877 chr3 152701320 152701320 + L1-Ta germline . no 685 .
srip80936 chr3 182952475 182952475 - L1-Ta germline . no 685 MCF2L2
srip81621 chr3 187835306 187835306 - L1-Ta germline . no 685 .
srip82645 chr4 15849204 15849204 + L1-Ta germline . no 685 CD38
srip82720 chr4 16950725 16950725 + L1-Ta germline . yes 685 .
srip83374 chr4 21167096 21167096 + L1-Ta germline . no 685 KCNIP4
srip83625 chr4 26929329 26929329 + L1-Ta germline . no 685 STIM2
srip83829 chr4 29321850 29321850 + L1-Ta germline . no 685 .
srip84626 chr4 46883027 46883027 + L1-Ta germline . no 685 .
srip84679 chr4 47007779 47007779 - L1-Ta germline . no 685 .
srip84958 chr4 48416463 48416463 - L1-Ta germline . no 685 SLAIN2
srip85025 chr4 48738022 48738022 + L1-Ta germline . no 685 FRYL
srip85056 chr4 49057917 49057917 - L1-Ta germline . no 685 CWH43
srip85389 chr4 57497063 57497063 - L1-Ta germline . no 685 .
srip85591 chr4 58428313 58428313 - L1-Ta germline . no 685 .
srip85628 chr4 58888335 58888335 + L1-Ta germline . no 685 .
srip85883 chr4 59442445 59442445 - L1-Ta germline . no 685 .
srip86334 chr4 66809073 66809073 - L1-Ta germline . no 685 .
srip87190 chr4 79032904 79032904 + L1-Ta germline . yes 685 FRAS1
srip87444 chr4 80864880 80864880 + L1-Ta germline . yes 685 ANTXR2
srip87742 chr4 82931377 82931377 + L1-Ta germline . yes 685 .
srip88365 chr4 99513572 99513572 - L1-Ta germline . no 685 TSPAN5
srip89296 chr4 107492188 107492188 - L1-Ta germline . no 685 .
srip89887 chr4 112628959 112628959 + L1-Ta germline . no 685 .
srip90329 chr4 115132696 115132696 + L1-Ta germline . no 685 .
srip92244 chr4 134596424 134596424 + L1-Ta germline . no 685 .
srip92330 chr4 136006539 136006539 + L1-Ta germline . no 685 .
srip92798 chr4 138177326 138177326 + L1-Ta germline . no 685 .
srip93185 chr4 147543284 147543284 + L1-Ta germline . no 685 .
srip94163 chr4 167369021 167369021 - L1-Ta germline . no 685 .
srip94476 chr4 170281916 170281916 - L1-Ta germline . no 685 .
srip94541 chr4 170436610 170436610 - L1-Ta germline . no 685 NEK1
srip95128 chr4 182695155 182695155 - L1-Ta germline . no 685 .
srip95744 chr5 7603653 7603653 - L1-Ta germline . no 685 ADCY2
srip98147 chr5 34153955 34153955 + L1-Ta germline . yes 685 .
srip98853 chr5 51488295 51488295 - L1-Ta germline . no 685 .
srip101465 chr5 99981611 99981611 + L1-Ta germline . yes 685 .
srip101539 chr5 105483500 105483500 - L1-Ta germline . no 685 .
srip101730 chr5 108601132 108601132 + L1-Ta germline . no 685 .
srip102600 chr5 110474800 110474800 + L1-Ta germline . yes 685 .
srip102631 chr5 110643939 110643939 + L1-Ta germline . yes 685 CAMK4
srip103019 chr5 124907258 124907258 + L1-Ta germline . yes 685 .
srip103451 chr5 132924977 132924977 + L1-Ta germline . yes 685 FSTL4
srip103955 chr5 138420464 138420464 + L1-Ta germline . yes 685 SIL1
srip104587 chr5 151462442 151462442 + L1-Ta germline . no 685 .
srip104939 chr5 155488954 155488954 - L1-Ta germline . yes 685 .
srip105560 chr5 159351193 159351193 - L1-Ta germline . no 685 ADRA1B
srip105894 chr5 165848548 165848548 + L1-Ta germline . yes 685 .
srip106079 chr5 172829796 172829796 - L1-Ta germline . no 685 .
srip107709 chr6 18910854 18910854 - L1-Ta germline . no 685 .
srip108230 chr6 39645329 39645329 - L1-Ta germline . yes 685 KIF6
srip109865 chr6 66787597 66787597 - L1-Ta germline . no 685 .
srip109902 chr6 67313668 67313668 + L1-Ta germline . yes 685 .
srip110388 chr6 73995229 73995229 - L1-Ta germline . no 685 C6orf147
srip111379 chr6 84049691 84049691 + L1-Ta germline . yes 685 ME1
srip112034 chr6 91669505 91669505 - L1-Ta germline . no 685 .
srip112951 chr6 113030984 113030984 + L1-Ta germline . no 685 LOC100287612
srip113172 chr6 121489953 121489953 + L1-Ta germline . no 685 C6orf170
srip113607 chr6 136712687 136712687 + L1-Ta germline . yes 685 MAP7
srip114185 chr6 145500938 145500938 - L1-Ta germline . no 685 .
srip114626 chr6 148195788 148195788 + L1-Ta germline . no 685 .
srip114844 chr6 153029982 153029982 - L1-Ta germline . no 685 MYCT1
srip114899 chr6 154584580 154584580 - L1-Ta germline . no 685 IPCEF1
srip115769 chr6 162404960 162404960 + L1-Ta germline . no 685 PARK2
srip116560 chr7 25081462 25081462 - L1-Ta germline . no 685 .
srip116747 chr7 30484894 30484894 + L1-Ta germline . no 685 NOD1
srip117128 chr7 45733735 45733735 + L1-Ta germline . no 685 ADCY1
srip118592 chr7 69668336 69668336 + L1-Ta germline . yes 685 AUTS2
srip118647 chr7 69828469 69828469 + L1-Ta germline . no 685 AUTS2
srip119667 chr7 84901721 84901721 - L1-Ta germline . no 685 .
srip121463 chr7 107829247 107829247 + L1-Ta germline . no 685 NRCAM
srip122100 chr7 109548699 109548699 + L1-Ta germline . no 685 .
srip122348 chr7 111609264 111609264 + L1-Ta germline . yes 685 DOCK4
srip122512 chr7 113139394 113139394 + L1-Ta germline . yes 685 .
srip123035 chr7 129507566 129507566 + L1-Ta germline . no 685 UBE2H
srip123092 chr7 130386823 130386823 - L1-Ta germline . no 685 .
srip124814 chr8 9597567 9597567 + L1-Ta germline . yes 685 TNKS
srip125031 chr8 18768149 18768149 + L1-Ta germline . yes 685 PSD3
srip126997 chr8 71583563 71583563 - L1-Ta germline . no 685 XKR9
srip128532 chr8 97911008 97911008 + L1-Ta germline . yes 685 PGCP
srip128684 chr8 100233000 100233000 - L1-Ta germline . no 685 VPS13B
srip128952 chr8 114072203 114072203 - L1-Ta germline . no 685 CSMD3
srip130433 chr8 137450317 137450317 - L1-Ta germline . yes 685 .
srip133226 chr9 32463884 32463884 - L1-Ta germline . no 685 DDX58
srip134142 chr9 80014129 80014129 + L1-Ta germline . no 685 VPS13A
srip134315 chr9 86065262 86065262 - L1-Ta germline . no 685 FRMD3
srip134608 chr9 98465870 98465870 + L1-Ta germline . yes 685 .
srip134763 chr9 102615582 102615582 - L1-Ta germline . no 685 NR4A3
srip134819 chr9 103749297 103749297 + L1-Ta germline . no 685 .
srip135640 chr9 113185472 113185472 + L1-Ta germline . no 685 SVEP1
srip136359 chrX 11731399 11731399 + L1-Ta germline . yes 685 .
srip136977 chrX 45449426 45449426 + L1-Ta germline . no 685 .
srip137030 chrX 49731196 49731196 - L1-Ta germline . no 685 CLCN5
srip138013 chrX 63233094 63233094 - L1-Ta germline . no 685 .
srip138296 chrX 64430988 64430988 + L1-Ta germline . no 685 .
srip138382 chrX 67263241 67263241 + L1-Ta germline . no 685 OPHN1
srip138501 chrX 72606851 72606851 + L1-Ta germline . no 685 .
srip138768 chrX 75543182 75543182 - L1-Ta germline . no 685 .
srip139053 chrX 75949601 75949601 + L1-Ta germline . no 685 .
srip139083 chrX 76425435 76425435 - L1-Ta germline . no 685 .
srip139124 chrX 77696853 77696853 - L1-Ta germline . no 685 .
srip139539 chrX 94857127 94857127 + L1-Ta germline . yes 685 .
srip140179 chrX 105718545 105718545 + L1-Ta germline . yes 685 .
srip140641 chrX 118569413 118569413 - L1-Ta germline . no 685 SLC25A43
srip140798 chrX 119892835 119892835 - L1-Ta germline . no 685 .
srip141457 chrX 130140534 130140534 + L1-Ta germline . no 685 .
srip141502 chrX 134162047 134162047 + L1-Ta germline . no 685 .
srip141641 chrX 137146500 137146500 + L1-Ta germline . no 685 .
srip141991 chrX 141571641 141571641 + L1-Ta germline . yes 685 .
srip142153 chrX 154745667 154745667 - L1-Ta germline . no 685 TMLHE