euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

181 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip346 chr1 41201714 41201714 - L1-Ta germline . no 678 NFYC
srip1568 chr1 69801801 69801801 + L1-Ta germline . no 678 .
srip1655 chr1 74984526 74984526 - L1-Ta germline . no 678 FPGT-TNNI3K;TNNI3K
srip1683 chr1 75192713 75192713 - L1-Ta germline . no 678 CRYZ
srip2196 chr1 86741680 86741680 + L1-Ta germline . yes 678 .
srip2249 chr1 87144762 87144762 - L1-Ta germline . no 678 .
srip2601 chr1 99678977 99678977 - L1-Ta germline . no 678 .
srip3255 chr1 105386449 105386449 - L1-Ta germline . no 678 .
srip4102 chr1 149308424 149308424 + L1-Ta germline . no 678 LOC645262
srip4200 chr1 152462236 152462236 - L1-Ta germline . no 678 .
srip4300 chr1 158238664 158238664 + L1-Ta germline . yes 678 .
srip4576 chr1 163231881 163231881 - L1-Ta germline . no 678 LOC100505773
srip4807 chr1 165940104 165940104 - L1-Ta germline . yes 678 .
srip5834 chr1 192072266 192072266 - L1-Ta germline . no 678 .
srip6144 chr1 193836827 193836827 + L1-Ta germline . yes 678 .
srip6480 chr1 218182567 218182567 - L1-Ta germline . no 678 .
srip6511 chr1 218246475 218246475 + L1-Ta germline . yes 678 .
srip8722 chr10 32929792 32929792 - L1-Ta germline . no 678 C10orf68
srip11299 chr10 110846814 110846814 + L1-Ta germline . yes 678 .
srip12624 chr11 15995864 15995864 - L1-Ta germline . no 678 SOX6
srip13674 chr11 33670122 33670122 + L1-Ta germline validated no 678 C11orf41
srip16782 chr11 87051059 87051059 - L1-Ta germline . no 678 .
srip17406 chr11 99478828 99478828 + L1-Ta germline . yes 678 CNTN5
srip23133 chr12 65689252 65689252 - L1-Ta germline validated no 678 MSRB3
srip25304 chr12 98672913 98672913 + L1-Ta germline . yes 678 .
srip25363 chr12 102842494 102842494 + L1-Ta germline . no 678 IGF1
srip26402 chr12 126802939 126802939 - L1-Ta germline . no 678 .
srip27531 chr13 30215833 30215833 - L1-Ta germline . no 678 .
srip28378 chr13 57793451 57793451 - L1-Ta germline . no 678 .
srip28700 chr13 61462318 61462318 - L1-Ta germline . no 678 .
srip29442 chr13 61734484 61734484 + L1-Ta germline . no 678 .
srip30609 chr13 78055332 78055332 + L1-Ta germline . no 678 .
srip32071 chr13 86502081 86502081 + L1-Ta germline . no 678 .
srip32467 chr13 92855881 92855881 + L1-Ta germline . yes 678 GPC5
srip33700 chr13 104704163 104704163 + L1-Ta germline . yes 678 .
srip34339 chr14 20554442 20554442 - L1-Ta germline . no 678 .
srip34406 chr14 24582584 24582584 + L1-Ta germline . yes 678 .
srip35332 chr14 30525248 30525248 + L1-Ta germline . no 678 .
srip38017 chr14 71020049 71020049 + L1-Ta germline . no 678 .
srip38907 chr14 95605326 95605326 + L1-Ta germline . no 678 DICER1
srip39012 chr15 20116657 20116657 + L1-Ta germline . no 678 .
srip40794 chr15 51875289 51875289 - L1-Ta germline . no 678 DMXL2
srip40854 chr15 53448042 53448042 - L1-Ta germline . no 678 .
srip41319 chr15 58012013 58012013 - L1-Ta germline . no 678 .
srip41811 chr15 71027483 71027483 + L1-Ta germline . yes 678 UACA
srip44176 chr16 18832538 18832538 - L1-Ta germline . no 678 SMG1
srip45950 chr16 65729907 65729907 + L1-Ta germline . yes 678 .
srip47432 chr17 29659591 29659591 - L1-Ta germline . no 678 NF1
srip48726 chr18 5332408 5332408 - L1-Ta germline . no 678 .
srip49535 chr18 30185593 30185593 - L1-Ta germline . no 678 .
srip49741 chr18 34567457 34567457 + L1-Ta germline . yes 678 KIAA1328
srip51059 chr18 59763726 59763726 - L1-Ta germline . no 678 PIGN
srip51142 chr18 61030433 61030433 - L1-Ta germline . no 678 KDSR
srip51227 chr18 63446487 63446487 - L1-Ta germline . no 678 CDH7
srip51372 chr18 69024727 69024727 + L1-Ta germline . yes 678 .
srip52510 chr19 55091547 55091547 - L1-Ta germline . no 678 LILRA2
srip52538 chr19_gl000208_random 89113 89113 - L1-Ta germline . no 678 .
srip52849 chr2 11930045 11930045 - L1-Ta germline . no 678 LPIN1
srip55646 chr2 73354355 73354355 - L1-Ta germline . no 678 .
srip56131 chr2 82098027 82098027 + L1-Ta germline . no 678 .
srip56944 chr2 106216679 106216679 - L1-Ta germline . no 678 LOC285000
srip57006 chr2 108631988 108631988 - L1-Ta germline . no 678 .
srip57345 chr2 116246475 116246475 + L1-Ta germline . no 678 DPP10
srip58368 chr2 142788891 142788891 - L1-Ta germline . no 678 LRP1B
srip59473 chr2 153864262 153864262 - L1-Ta germline . no 678 .
srip59643 chr2 160149126 160149126 - L1-Ta germline . yes 678 .
srip61333 chr2 205631655 205631655 - L1-Ta germline . no 678 PARD3B
srip61614 chr2 212707182 212707182 + L1-Ta germline . no 678 ERBB4
srip61765 chr2 214647628 214647628 - L1-Ta germline . no 678 SPAG16
srip63303 chr20 12781652 12781652 - L1-Ta germline . no 678 .
srip63989 chr20 23412776 23412776 + L1-Ta germline . yes 678 .
srip66534 chr21 24125137 24125137 + L1-Ta germline . yes 678 .
srip66903 chr21 29069173 29069173 + L1-Ta germline . no 678 .
srip68247 chr22 29065287 29065287 + L1-Ta germline . yes 678 TTC28
srip69695 chr3 656444 656444 - L1-Ta germline validated no 678 .
srip69761 chr3 2050178 2050178 + L1-Ta germline . yes 678 .
srip69877 chr3 4080917 4080917 - L1-Ta germline . yes 678 .
srip70549 chr3 21234919 21234919 + L1-Ta germline . no 678 .
srip70640 chr3 22097802 22097802 + L1-Ta germline . no 678 LOC100505836
srip70856 chr3 25740941 25740941 - L1-Ta germline . no 678 .
srip70915 chr3 26439488 26439488 - L1-Ta germline . no 678 .
srip71372 chr3 33554072 33554072 + L1-Ta germline . no 678 CLASP2
srip71998 chr3 41821477 41821477 + L1-Ta germline . yes 678 ULK4
srip73360 chr3 59852889 59852889 + L1-Ta germline . no 678 FHIT
srip74616 chr3 81770349 81770349 + L1-Ta germline . yes 678 GBE1
srip76399 chr3 103275235 103275235 - L1-Ta germline . no 678 .
srip76500 chr3 105473860 105473860 - L1-Ta germline . no 678 CBLB
srip76588 chr3 108924737 108924737 + L1-Ta germline . yes 678 .
srip76669 chr3 109836400 109836400 - L1-Ta germline . no 678 .
srip76785 chr3 116084880 116084880 + L1-Ta germline . no 678 LSAMP-AS1;LSAMP
srip77116 chr3 123590712 123590712 + L1-Ta germline validated no 678 MYLK
srip77318 chr3 124921530 124921530 + L1-Ta germline . no 678 SLC12A8
srip77388 chr3 129972765 129972765 + L1-Ta germline . yes 678 COL6A4P2
srip77830 chr3 137073450 137073450 + L1-Ta germline . no 678 .
srip78938 chr3 154632590 154632590 + L1-Ta germline . yes 678 .
srip79237 chr3 158813156 158813156 - L1-Ta germline . yes 678 IQCJ;IQCJ-SCHIP1
srip80331 chr3 176091321 176091321 + L1-Ta germline . no 678 .
srip80930 chr3 182952475 182952475 - L1-Ta germline . no 678 MCF2L2
srip81391 chr3 186372123 186372123 + L1-Ta germline . no 678 .
srip81615 chr3 187835306 187835306 - L1-Ta germline . no 678 .
srip81750 chr3 188234419 188234419 + L1-Ta germline validated no 678 LPP
srip82339 chr4 7995690 7995690 - L1-Ta germline . no 678 ABLIM2
srip82638 chr4 15849204 15849204 + L1-Ta germline . no 678 CD38
srip82714 chr4 16950725 16950725 + L1-Ta germline . yes 678 .
srip83308 chr4 19170950 19170950 + L1-Ta germline . no 678 .
srip84571 chr4 46799112 46799112 + L1-Ta germline . yes 678 COX7B2
srip84620 chr4 46883027 46883027 + L1-Ta germline . no 678 .
srip85020 chr4 48738022 48738022 + L1-Ta germline . no 678 FRYL
srip85588 chr4 58428313 58428313 - L1-Ta germline . no 678 .
srip85876 chr4 59442445 59442445 - L1-Ta germline . no 678 .
srip85944 chr4 59950600 59950600 + L1-Ta germline . no 678 .
srip87184 chr4 79032904 79032904 + L1-Ta germline . yes 678 FRAS1
srip87438 chr4 80864880 80864880 + L1-Ta germline . yes 678 ANTXR2
srip87476 chr4 80894074 80894074 + L1-Ta germline . yes 678 ANTXR2
srip87738 chr4 82931377 82931377 + L1-Ta germline . yes 678 .
srip88071 chr4 88486275 88486275 + L1-Ta germline . yes 678 .
srip88360 chr4 99513572 99513572 - L1-Ta germline . no 678 TSPAN5
srip89289 chr4 107492188 107492188 - L1-Ta germline . no 678 .
srip89884 chr4 112628959 112628959 + L1-Ta germline . no 678 .
srip92323 chr4 136006539 136006539 + L1-Ta germline . no 678 .
srip94473 chr4 170281916 170281916 - L1-Ta germline . no 678 .
srip94534 chr4 170436610 170436610 - L1-Ta germline . no 678 NEK1
srip95122 chr4 182695155 182695155 - L1-Ta germline . no 678 .
srip96414 chr5 12197468 12197468 - L1-Ta germline . yes 678 .
srip98847 chr5 51488295 51488295 - L1-Ta germline . no 678 .
srip101458 chr5 99981611 99981611 + L1-Ta germline . yes 678 .
srip102841 chr5 119466324 119466324 - L1-Ta germline . no 678 .
srip103948 chr5 138420464 138420464 + L1-Ta germline . yes 678 SIL1
srip105555 chr5 159351193 159351193 - L1-Ta germline . no 678 ADRA1B
srip105889 chr5 165848548 165848548 + L1-Ta germline . yes 678 .
srip106073 chr5 172829796 172829796 - L1-Ta germline . no 678 .
srip108223 chr6 39645329 39645329 - L1-Ta germline . yes 678 KIF6
srip108790 chr6 50611605 50611605 - L1-Ta germline . no 678 .
srip108887 chr6 55594843 55594843 - L1-Ta germline . no 678 .
srip110156 chr6 70726265 70726265 + L1-Ta germline . yes 678 COL19A1
srip110384 chr6 73995229 73995229 - L1-Ta germline . no 678 C6orf147
srip112944 chr6 113030984 113030984 + L1-Ta germline . no 678 LOC100287612
srip113111 chr6 115899917 115899917 - L1-Ta germline . no 678 .
srip113540 chr6 133536678 133536678 - L1-Ta germline . no 678 .
srip113600 chr6 136712687 136712687 + L1-Ta germline . yes 678 MAP7
srip114182 chr6 145500938 145500938 - L1-Ta germline . no 678 .
srip115721 chr6 162289312 162289312 + L1-Ta germline validated no 678 PARK2
srip116553 chr7 25081462 25081462 - L1-Ta germline . no 678 .
srip118585 chr7 69668336 69668336 + L1-Ta germline . yes 678 AUTS2
srip118641 chr7 69828469 69828469 + L1-Ta germline . no 678 AUTS2
srip120440 chr7 89704574 89704574 + L1-Ta germline . no 678 .
srip120772 chr7 93146616 93146616 - L1-Ta germline . no 678 CALCR
srip122342 chr7 111609264 111609264 + L1-Ta germline . yes 678 DOCK4
srip122507 chr7 113139394 113139394 + L1-Ta germline . yes 678 .
srip123028 chr7 129507566 129507566 + L1-Ta germline . no 678 UBE2H
srip123085 chr7 130386823 130386823 - L1-Ta germline . no 678 .
srip123218 chr7 141620449 141620449 - L1-Ta germline . no 678 .
srip123476 chr7 145063368 145063368 + L1-Ta germline . yes 678 .
srip123707 chr7 154155053 154155053 + L1-Ta germline . yes 678 DPP6
srip124807 chr8 9597567 9597567 + L1-Ta germline . yes 678 TNKS
srip125026 chr8 18768149 18768149 + L1-Ta germline . yes 678 PSD3
srip125588 chr8 25323095 25323095 - L1-Ta germline . no 678 CDCA2
srip126395 chr8 58347939 58347939 + L1-Ta germline . no 678 .
srip126993 chr8 71583563 71583563 - L1-Ta germline . no 678 XKR9
srip127542 chr8 75723721 75723721 + L1-Ta germline . no 678 .
srip128527 chr8 97911008 97911008 + L1-Ta germline . yes 678 PGCP
srip128681 chr8 100233000 100233000 - L1-Ta germline . no 678 VPS13B
srip128945 chr8 114072203 114072203 - L1-Ta germline . no 678 CSMD3
srip130428 chr8 137450317 137450317 - L1-Ta germline . yes 678 .
srip134135 chr9 80014129 80014129 + L1-Ta germline . no 678 VPS13A
srip134308 chr9 86065262 86065262 - L1-Ta germline . no 678 FRMD3
srip134390 chr9 92917935 92917935 + L1-Ta germline . yes 678 .
srip134601 chr9 98465870 98465870 + L1-Ta germline . yes 678 .
srip135637 chr9 113185472 113185472 + L1-Ta germline . no 678 SVEP1
srip137557 chrX 55585146 55585146 - L1-Ta germline . no 678 .
srip138010 chrX 63233094 63233094 - L1-Ta germline . no 678 .
srip138496 chrX 72606851 72606851 + L1-Ta germline . no 678 .
srip139082 chrX 76425435 76425435 - L1-Ta germline . no 678 .
srip139346 chrX 85609830 85609830 + L1-Ta germline . yes 678 DACH2
srip139533 chrX 94857127 94857127 + L1-Ta germline . yes 678 .
srip139772 chrX 98264296 98264296 - L1-Ta germline validated no 678 .
srip140174 chrX 105718545 105718545 + L1-Ta germline . yes 678 .
srip140860 chrX 120397638 120397638 - L1-Ta germline . no 678 .
srip141238 chrX 129525220 129525220 - L1-Ta germline . no 678 .
srip141634 chrX 137146500 137146500 + L1-Ta germline . no 678 .
srip142146 chrX 154745667 154745667 - L1-Ta germline . no 678 TMLHE