euL1db |
The European database of L1-HS retrotransposon insertions in humans |
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SRIP ID | Chromosome | Start | Stop | Strand | Sub group | Lineage | PCR | Reference | SampleID | GeneName |
---|---|---|---|---|---|---|---|---|---|---|
srip51 | chr1 | 12875996 | 12875996 | - | L1-Ta | germline | . | no | 652 | . |
srip183 | chr1 | 31041664 | 31041664 | + | L1-Ta | germline | . | no | 652 | . |
srip1630 | chr1 | 74984526 | 74984526 | - | L1-Ta | germline | . | no | 652 | FPGT-TNNI3K;TNNI3K |
srip1679 | chr1 | 75192713 | 75192713 | - | L1-Ta | germline | . | no | 652 | CRYZ |
srip2049 | chr1 | 83127611 | 83127611 | + | L1-Ta | germline | . | no | 652 | . |
srip2136 | chr1 | 86398798 | 86398798 | + | L1-Ta | germline | . | no | 652 | COL24A1 |
srip2189 | chr1 | 86741680 | 86741680 | + | L1-Ta | germline | . | yes | 652 | . |
srip2223 | chr1 | 87144762 | 87144762 | - | L1-Ta | germline | . | no | 652 | . |
srip3231 | chr1 | 105386449 | 105386449 | - | L1-Ta | germline | . | no | 652 | . |
srip3959 | chr1 | 121478354 | 121478354 | + | L1-Ta | germline | . | yes | 652 | . |
srip4085 | chr1 | 149308424 | 149308424 | + | L1-Ta | germline | . | no | 652 | LOC645262 |
srip4192 | chr1 | 152462236 | 152462236 | - | L1-Ta | germline | . | no | 652 | . |
srip4275 | chr1 | 158238664 | 158238664 | + | L1-Ta | germline | . | yes | 652 | . |
srip4557 | chr1 | 163231881 | 163231881 | - | L1-Ta | germline | . | no | 652 | LOC100505773 |
srip4792 | chr1 | 165940104 | 165940104 | - | L1-Ta | germline | . | yes | 652 | . |
srip5513 | chr1 | 180668321 | 180668321 | - | L1-Ta | germline | . | no | 652 | XPR1 |
srip6121 | chr1 | 193836827 | 193836827 | + | L1-Ta | germline | . | yes | 652 | . |
srip7034 | chr1 | 228058514 | 228058514 | - | L1-Ta | germline | . | yes | 652 | . |
srip8119 | chr10 | 23842056 | 23842056 | - | L1-Ta | germline | . | no | 652 | . |
srip8700 | chr10 | 32929792 | 32929792 | - | L1-Ta | germline | . | no | 652 | C10orf68 |
srip8960 | chr10 | 58863547 | 58863547 | - | L1-Ta | germline | . | no | 652 | . |
srip10777 | chr10 | 107137008 | 107137008 | - | L1-Ta | germline | . | no | 652 | . |
srip11274 | chr10 | 110846814 | 110846814 | + | L1-Ta | germline | . | yes | 652 | . |
srip12605 | chr11 | 15995864 | 15995864 | - | L1-Ta | germline | . | no | 652 | SOX6 |
srip12697 | chr11 | 24355519 | 24355519 | + | L1-Ta | germline | . | yes | 652 | . |
srip14572 | chr11 | 46606105 | 46606105 | + | L1-Ta | germline | . | no | 652 | AMBRA1 |
srip15519 | chr11 | 59815986 | 59815986 | - | L1-Ta | germline | . | no | 652 | . |
srip17224 | chr11 | 94684419 | 94684419 | + | L1-Ta | germline | . | no | 652 | . |
srip17381 | chr11 | 99478828 | 99478828 | + | L1-Ta | germline | . | yes | 652 | CNTN5 |
srip20285 | chr12 | 14335361 | 14335361 | + | L1-Ta | germline | . | yes | 652 | . |
srip22448 | chr12 | 44501995 | 44501995 | - | L1-Ta | germline | . | yes | 652 | TMEM117 |
srip23400 | chr12 | 70167057 | 70167057 | - | L1-Ta | germline | . | no | 652 | RAB3IP |
srip24044 | chr12 | 79570815 | 79570815 | - | L1-Ta | germline | . | no | 652 | SYT1 |
srip25279 | chr12 | 98672913 | 98672913 | + | L1-Ta | germline | . | yes | 652 | . |
srip25350 | chr12 | 102842494 | 102842494 | + | L1-Ta | germline | . | no | 652 | IGF1 |
srip27585 | chr13 | 33441812 | 33441812 | - | L1-Ta | germline | . | no | 652 | . |
srip28359 | chr13 | 57793451 | 57793451 | - | L1-Ta | germline | . | no | 652 | . |
srip28466 | chr13 | 59088395 | 59088395 | + | L1-Ta | germline | . | no | 652 | . |
srip28689 | chr13 | 61462318 | 61462318 | - | L1-Ta | germline | . | no | 652 | . |
srip30323 | chr13 | 72968674 | 72968674 | + | L1-Ta | germline | . | no | 652 | . |
srip32049 | chr13 | 86502081 | 86502081 | + | L1-Ta | germline | . | no | 652 | . |
srip32213 | chr13 | 88851194 | 88851194 | - | L1-Ta | germline | . | no | 652 | . |
srip32444 | chr13 | 92855881 | 92855881 | + | L1-Ta | germline | . | yes | 652 | GPC5 |
srip33687 | chr13 | 104704163 | 104704163 | + | L1-Ta | germline | . | yes | 652 | . |
srip35372 | chr14 | 30854669 | 30854669 | + | L1-Ta | germline | . | no | 652 | . |
srip37016 | chr14 | 48662336 | 48662336 | + | L1-Ta | germline | . | no | 652 | . |
srip37997 | chr14 | 71020049 | 71020049 | + | L1-Ta | germline | . | no | 652 | . |
srip38883 | chr14 | 95605326 | 95605326 | + | L1-Ta | germline | . | no | 652 | DICER1 |
srip38969 | chr15 | 20022208 | 20022208 | - | L1-Ta | germline | . | no | 652 | . |
srip40772 | chr15 | 51875289 | 51875289 | - | L1-Ta | germline | . | no | 652 | DMXL2 |
srip41740 | chr15 | 62308185 | 62308185 | + | L1-Ta | germline | . | no | 652 | VPS13C |
srip43280 | chr15 | 100931158 | 100931158 | - | L1-Ta | germline | . | no | 652 | . |
srip43840 | chr16 | 7925421 | 7925421 | + | L1-Ta | germline | . | no | 652 | . |
srip44158 | chr16 | 18832538 | 18832538 | - | L1-Ta | germline | . | no | 652 | SMG1 |
srip45825 | chr16 | 61079187 | 61079187 | + | L1-Ta | germline | . | no | 652 | . |
srip45930 | chr16 | 65729907 | 65729907 | + | L1-Ta | germline | . | yes | 652 | . |
srip47415 | chr17 | 29659591 | 29659591 | - | L1-Ta | germline | . | no | 652 | NF1 |
srip47479 | chr17 | 32192799 | 32192799 | + | L1-Ta | germline | . | yes | 652 | ACCN1 |
srip48700 | chr18 | 5332408 | 5332408 | - | L1-Ta | germline | . | no | 652 | . |
srip49510 | chr18 | 30185593 | 30185593 | - | L1-Ta | germline | . | no | 652 | . |
srip50861 | chr18 | 58172211 | 58172211 | - | L1-Ta | germline | . | no | 652 | . |
srip51042 | chr18 | 59763726 | 59763726 | - | L1-Ta | germline | . | no | 652 | PIGN |
srip51118 | chr18 | 61030433 | 61030433 | - | L1-Ta | germline | . | no | 652 | KDSR |
srip51206 | chr18 | 63446487 | 63446487 | - | L1-Ta | germline | . | no | 652 | CDH7 |
srip51276 | chr18 | 68413712 | 68413712 | - | L1-Ta | germline | . | no | 652 | . |
srip51346 | chr18 | 69024727 | 69024727 | + | L1-Ta | germline | . | yes | 652 | . |
srip51395 | chr18 | 69617341 | 69617341 | + | L1-Ta | germline | . | no | 652 | . |
srip52493 | chr19 | 55091547 | 55091547 | - | L1-Ta | germline | . | no | 652 | LILRA2 |
srip55326 | chr2 | 71638563 | 71638563 | - | L1-Ta | germline | . | no | 652 | ZNF638 |
srip55623 | chr2 | 73354355 | 73354355 | - | L1-Ta | germline | . | no | 652 | . |
srip56567 | chr2 | 88206937 | 88206937 | + | L1-Ta | germline | . | yes | 652 | . |
srip56982 | chr2 | 108631988 | 108631988 | - | L1-Ta | germline | . | no | 652 | . |
srip57960 | chr2 | 139785112 | 139785112 | - | L1-Ta | germline | . | no | 652 | . |
srip58345 | chr2 | 142788891 | 142788891 | - | L1-Ta | germline | . | no | 652 | LRP1B |
srip59450 | chr2 | 153864262 | 153864262 | - | L1-Ta | germline | . | no | 652 | . |
srip59823 | chr2 | 170111155 | 170111155 | + | L1-Ta | germline | . | yes | 652 | LRP2 |
srip61309 | chr2 | 205631655 | 205631655 | - | L1-Ta | germline | . | no | 652 | PARD3B |
srip61808 | chr2 | 218176494 | 218176494 | + | L1-Ta | germline | . | yes | 652 | DIRC3 |
srip63965 | chr20 | 23412776 | 23412776 | + | L1-Ta | germline | . | yes | 652 | . |
srip64742 | chr20 | 41952103 | 41952103 | - | L1-Ta | germline | . | no | 652 | . |
srip67897 | chr22 | 28455877 | 28455877 | - | L1-Ta | germline | . | no | 652 | TTC28 |
srip69670 | chr3 | 656444 | 656444 | - | L1-Ta | germline | validated | no | 652 | . |
srip69739 | chr3 | 2050178 | 2050178 | + | L1-Ta | germline | . | yes | 652 | . |
srip69862 | chr3 | 4080917 | 4080917 | - | L1-Ta | germline | . | yes | 652 | . |
srip70837 | chr3 | 25740941 | 25740941 | - | L1-Ta | germline | . | no | 652 | . |
srip70893 | chr3 | 26439488 | 26439488 | - | L1-Ta | germline | . | no | 652 | . |
srip71355 | chr3 | 33554072 | 33554072 | + | L1-Ta | germline | . | no | 652 | CLASP2 |
srip72105 | chr3 | 46824583 | 46824583 | - | L1-Ta | germline | . | no | 652 | . |
srip76474 | chr3 | 105473860 | 105473860 | - | L1-Ta | germline | . | no | 652 | CBLB |
srip76648 | chr3 | 109836400 | 109836400 | - | L1-Ta | germline | . | no | 652 | . |
srip76769 | chr3 | 116084880 | 116084880 | + | L1-Ta | germline | . | no | 652 | LSAMP-AS1;LSAMP |
srip76889 | chr3 | 121120741 | 121120741 | + | L1-Ta | germline | . | yes | 652 | STXBP5L |
srip77362 | chr3 | 129972765 | 129972765 | + | L1-Ta | germline | . | yes | 652 | COL6A4P2 |
srip77564 | chr3 | 132664831 | 132664831 | - | L1-Ta | germline | . | no | 652 | . |
srip78869 | chr3 | 152701320 | 152701320 | + | L1-Ta | germline | . | no | 652 | . |
srip78918 | chr3 | 154632590 | 154632590 | + | L1-Ta | germline | . | yes | 652 | . |
srip79214 | chr3 | 158813156 | 158813156 | - | L1-Ta | germline | . | yes | 652 | IQCJ;IQCJ-SCHIP1 |
srip79955 | chr3 | 172749131 | 172749131 | - | L1-Ta | germline | . | no | 652 | SPATA16 |
srip80309 | chr3 | 176091321 | 176091321 | + | L1-Ta | germline | . | no | 652 | . |
srip80911 | chr3 | 182952475 | 182952475 | - | L1-Ta | germline | . | no | 652 | MCF2L2 |
srip81379 | chr3 | 186372123 | 186372123 | + | L1-Ta | germline | . | no | 652 | . |
srip81591 | chr3 | 187835306 | 187835306 | - | L1-Ta | germline | . | no | 652 | . |
srip82331 | chr4 | 7995690 | 7995690 | - | L1-Ta | germline | . | no | 652 | ABLIM2 |
srip82627 | chr4 | 15849204 | 15849204 | + | L1-Ta | germline | . | no | 652 | CD38 |
srip82695 | chr4 | 16950725 | 16950725 | + | L1-Ta | germline | . | yes | 652 | . |
srip83287 | chr4 | 19170950 | 19170950 | + | L1-Ta | germline | . | no | 652 | . |
srip83595 | chr4 | 26929329 | 26929329 | + | L1-Ta | germline | . | no | 652 | STIM2 |
srip84553 | chr4 | 46799112 | 46799112 | + | L1-Ta | germline | . | yes | 652 | COX7B2 |
srip84994 | chr4 | 48738022 | 48738022 | + | L1-Ta | germline | . | no | 652 | FRYL |
srip85856 | chr4 | 59442445 | 59442445 | - | L1-Ta | germline | . | no | 652 | . |
srip86321 | chr4 | 66809073 | 66809073 | - | L1-Ta | germline | . | no | 652 | . |
srip87073 | chr4 | 71200089 | 71200089 | + | L1-Ta | germline | . | no | 652 | . |
srip87159 | chr4 | 79032904 | 79032904 | + | L1-Ta | germline | . | yes | 652 | FRAS1 |
srip87416 | chr4 | 80864880 | 80864880 | + | L1-Ta | germline | . | yes | 652 | ANTXR2 |
srip87466 | chr4 | 80894074 | 80894074 | + | L1-Ta | germline | . | yes | 652 | ANTXR2 |
srip89273 | chr4 | 107492188 | 107492188 | - | L1-Ta | germline | . | no | 652 | . |
srip90832 | chr4 | 120869874 | 120869874 | - | L1-Ta | germline | . | no | 652 | . |
srip92301 | chr4 | 136006539 | 136006539 | + | L1-Ta | germline | . | no | 652 | . |
srip94453 | chr4 | 170281916 | 170281916 | - | L1-Ta | germline | . | no | 652 | . |
srip94509 | chr4 | 170436610 | 170436610 | - | L1-Ta | germline | . | no | 652 | NEK1 |
srip96395 | chr5 | 12197468 | 12197468 | - | L1-Ta | germline | . | yes | 652 | . |
srip96849 | chr5 | 20644380 | 20644380 | - | L1-Ta | germline | . | no | 652 | . |
srip97779 | chr5 | 33633345 | 33633345 | - | L1-Ta | germline | . | no | 652 | ADAMTS12 |
srip98128 | chr5 | 34153955 | 34153955 | + | L1-Ta | germline | . | yes | 652 | . |
srip98826 | chr5 | 51488295 | 51488295 | - | L1-Ta | germline | . | no | 652 | . |
srip101434 | chr5 | 99981611 | 99981611 | + | L1-Ta | germline | . | yes | 652 | . |
srip101647 | chr5 | 105935364 | 105935364 | + | L1-Ta | germline | validated | no | 652 | . |
srip102573 | chr5 | 110474800 | 110474800 | + | L1-Ta | germline | . | yes | 652 | . |
srip102811 | chr5 | 118941211 | 118941211 | + | L1-Ta | germline | . | no | 652 | . |
srip103923 | chr5 | 138420464 | 138420464 | + | L1-Ta | germline | . | yes | 652 | SIL1 |
srip104253 | chr5 | 144473640 | 144473640 | + | L1-Ta | germline | . | no | 652 | . |
srip104919 | chr5 | 155488954 | 155488954 | - | L1-Ta | germline | . | yes | 652 | . |
srip105138 | chr5 | 155619862 | 155619862 | + | L1-Ta | germline | . | no | 652 | . |
srip106047 | chr5 | 172829796 | 172829796 | - | L1-Ta | germline | . | no | 652 | . |
srip106618 | chr6 | 2418002 | 2418002 | - | L1-Ta | germline | . | no | 652 | . |
srip107679 | chr6 | 18910854 | 18910854 | - | L1-Ta | germline | . | no | 652 | . |
srip108200 | chr6 | 39645329 | 39645329 | - | L1-Ta | germline | . | yes | 652 | KIF6 |
srip108744 | chr6 | 48868435 | 48868435 | - | L1-Ta | germline | . | no | 652 | . |
srip108865 | chr6 | 55594843 | 55594843 | - | L1-Ta | germline | . | no | 652 | . |
srip109842 | chr6 | 66787597 | 66787597 | - | L1-Ta | germline | . | no | 652 | . |
srip110137 | chr6 | 70726265 | 70726265 | + | L1-Ta | germline | . | yes | 652 | COL19A1 |
srip110364 | chr6 | 73995229 | 73995229 | - | L1-Ta | germline | . | no | 652 | C6orf147 |
srip110891 | chr6 | 77980636 | 77980636 | - | L1-Ta | germline | . | no | 652 | . |
srip112919 | chr6 | 113030984 | 113030984 | + | L1-Ta | germline | . | no | 652 | LOC100287612 |
srip113519 | chr6 | 133341827 | 133341827 | - | L1-Ta | germline | . | no | 652 | . |
srip113574 | chr6 | 136712687 | 136712687 | + | L1-Ta | germline | . | yes | 652 | MAP7 |
srip115207 | chr6 | 160829673 | 160829673 | - | L1-Ta | germline | . | no | 652 | SLC22A3 |
srip116531 | chr7 | 25081462 | 25081462 | - | L1-Ta | germline | . | no | 652 | . |
srip116654 | chr7 | 28783416 | 28783416 | - | L1-Ta | germline | . | no | 652 | CREB5 |
srip116719 | chr7 | 30484894 | 30484894 | + | L1-Ta | germline | . | no | 652 | NOD1 |
srip117104 | chr7 | 45733735 | 45733735 | + | L1-Ta | germline | . | no | 652 | ADCY1 |
srip118563 | chr7 | 69668336 | 69668336 | + | L1-Ta | germline | . | yes | 652 | AUTS2 |
srip118936 | chr7 | 75335791 | 75335791 | - | L1-Ta | germline | . | no | 652 | HIP1 |
srip122070 | chr7 | 109548699 | 109548699 | + | L1-Ta | germline | . | no | 652 | . |
srip123005 | chr7 | 129507566 | 129507566 | + | L1-Ta | germline | . | no | 652 | UBE2H |
srip123197 | chr7 | 141620449 | 141620449 | - | L1-Ta | germline | . | no | 652 | . |
srip123452 | chr7 | 145063368 | 145063368 | + | L1-Ta | germline | . | yes | 652 | . |
srip123673 | chr7 | 147539649 | 147539649 | - | L1-Ta | germline | . | no | 652 | CNTNAP2 |
srip123706 | chr7 | 154155053 | 154155053 | + | L1-Ta | germline | . | yes | 652 | DPP6 |
srip124343 | chr8 | 5829277 | 5829277 | - | L1-Ta | germline | . | no | 652 | . |
srip125003 | chr8 | 18768149 | 18768149 | + | L1-Ta | germline | . | yes | 652 | PSD3 |
srip125637 | chr8 | 28977684 | 28977684 | - | L1-Ta | germline | . | no | 652 | KIF13B |
srip128659 | chr8 | 100233000 | 100233000 | - | L1-Ta | germline | . | no | 652 | VPS13B |
srip128919 | chr8 | 114072203 | 114072203 | - | L1-Ta | germline | . | no | 652 | CSMD3 |
srip130406 | chr8 | 137450317 | 137450317 | - | L1-Ta | germline | . | yes | 652 | . |
srip131625 | chr9 | 10137698 | 10137698 | + | L1-Ta | germline | . | yes | 652 | PTPRD |
srip131898 | chr9 | 28111894 | 28111894 | - | L1-Ta | germline | . | yes | 652 | LINGO2 |
srip133202 | chr9 | 32463884 | 32463884 | - | L1-Ta | germline | . | no | 652 | DDX58 |
srip134109 | chr9 | 80014129 | 80014129 | + | L1-Ta | germline | . | no | 652 | VPS13A |
srip134289 | chr9 | 86065262 | 86065262 | - | L1-Ta | germline | . | no | 652 | FRMD3 |
srip134375 | chr9 | 92917935 | 92917935 | + | L1-Ta | germline | . | yes | 652 | . |
srip134576 | chr9 | 98465870 | 98465870 | + | L1-Ta | germline | . | yes | 652 | . |
srip134738 | chr9 | 102615582 | 102615582 | - | L1-Ta | germline | . | no | 652 | NR4A3 |
srip135215 | chr9 | 106501597 | 106501597 | - | L1-Ta | germline | . | no | 652 | . |
srip136337 | chrX | 11731399 | 11731399 | + | L1-Ta | germline | . | yes | 652 | . |
srip136958 | chrX | 45449426 | 45449426 | + | L1-Ta | germline | . | no | 652 | . |
srip137049 | chrX | 49784005 | 49784005 | - | L1-Ta | germline | . | no | 652 | CLCN5 |
srip137987 | chrX | 63233094 | 63233094 | - | L1-Ta | germline | . | no | 652 | . |
srip138284 | chrX | 64430988 | 64430988 | + | L1-Ta | germline | . | no | 652 | . |
srip139334 | chrX | 85609830 | 85609830 | + | L1-Ta | germline | . | yes | 652 | DACH2 |
srip139516 | chrX | 94857127 | 94857127 | + | L1-Ta | germline | . | yes | 652 | . |
srip140613 | chrX | 118569413 | 118569413 | - | L1-Ta | germline | . | no | 652 | SLC25A43 |
srip141612 | chrX | 137146500 | 137146500 | + | L1-Ta | germline | . | no | 652 | . |
srip142121 | chrX | 154745667 | 154745667 | - | L1-Ta | germline | . | no | 652 | TMLHE |
srip142447 | chrY | 19486845 | 19486845 | - | L1-Ta | germline | . | no | 652 | . |