euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

253 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1179 chr1 65909392 65909392 - L1-Ta germline . no 637 LEPR
srip1211 chr1 67544154 67544154 - L1-Ta germline . no 637 .
srip1618 chr1 74984526 74984526 - L1-Ta germline . no 637 FPGT-TNNI3K;TNNI3K
srip1675 chr1 75192713 75192713 - L1-Ta germline . no 637 CRYZ
srip2122 chr1 86398798 86398798 + L1-Ta germline . no 637 COL24A1
srip2179 chr1 86741680 86741680 + L1-Ta germline . yes 637 .
srip2208 chr1 87144762 87144762 - L1-Ta germline . no 637 .
srip2568 chr1 99678977 99678977 - L1-Ta germline . no 637 .
srip2621 chr1 99854086 99854086 - L1-Ta germline . no 637 .
srip3216 chr1 105386449 105386449 - L1-Ta germline . no 637 .
srip3945 chr1 121478354 121478354 + L1-Ta germline . yes 637 .
srip4073 chr1 149308424 149308424 + L1-Ta germline . no 637 LOC645262
srip4260 chr1 158238664 158238664 + L1-Ta germline . yes 637 .
srip4545 chr1 163231881 163231881 - L1-Ta germline . no 637 LOC100505773
srip6107 chr1 193836827 193836827 + L1-Ta germline . yes 637 .
srip6962 chr1 223491176 223491176 - L1-Ta germline . yes 637 SUSD4
srip7022 chr1 228058514 228058514 - L1-Ta germline . yes 637 .
srip7582 chr10 5293335 5293335 + L1-Ta germline . yes 637 .
srip8689 chr10 32929792 32929792 - L1-Ta germline . no 637 C10orf68
srip8947 chr10 58863547 58863547 - L1-Ta germline . no 637 .
srip10764 chr10 107137008 107137008 - L1-Ta germline . no 637 .
srip11259 chr10 110846814 110846814 + L1-Ta germline . yes 637 .
srip11381 chr10 117320225 117320225 - L1-Ta germline . no 637 ATRNL1
srip12593 chr11 15995864 15995864 - L1-Ta germline . no 637 SOX6
srip12686 chr11 24355519 24355519 + L1-Ta germline . yes 637 .
srip17251 chr11 95175423 95175423 + L1-Ta germline . no 637 .
srip17366 chr11 99478828 99478828 + L1-Ta germline . yes 637 CNTN5
srip17842 chr11 109048060 109048060 - L1-Ta germline . no 637 .
srip20271 chr12 14335361 14335361 + L1-Ta germline . yes 637 .
srip22434 chr12 44501995 44501995 - L1-Ta germline . yes 637 TMEM117
srip23389 chr12 70167057 70167057 - L1-Ta germline . no 637 RAB3IP
srip24035 chr12 79570815 79570815 - L1-Ta germline . no 637 SYT1
srip24955 chr12 86633816 86633816 + L1-Ta germline . yes 637 MGAT4C
srip25266 chr12 98672913 98672913 + L1-Ta germline . yes 637 .
srip25345 chr12 102842494 102842494 + L1-Ta germline . no 637 IGF1
srip26386 chr12 126802939 126802939 - L1-Ta germline . no 637 .
srip27511 chr13 30215833 30215833 - L1-Ta germline . no 637 .
srip27570 chr13 33441812 33441812 - L1-Ta germline . no 637 .
srip28345 chr13 57793451 57793451 - L1-Ta germline . no 637 .
srip28680 chr13 61462318 61462318 - L1-Ta germline . no 637 .
srip29422 chr13 61734484 61734484 + L1-Ta germline . no 637 .
srip30516 chr13 77186902 77186902 - L1-Ta germline . no 637 .
srip32034 chr13 86502081 86502081 + L1-Ta germline . no 637 .
srip32198 chr13 88851194 88851194 - L1-Ta germline . no 637 .
srip32432 chr13 92855881 92855881 + L1-Ta germline . yes 637 GPC5
srip34318 chr14 20554442 20554442 - L1-Ta germline . no 637 .
srip36321 chr14 39875096 39875096 + L1-Ta germline validated no 637 FBXO33
srip37394 chr14 59522422 59522422 - L1-Ta germline . no 637 .
srip37982 chr14 71020049 71020049 + L1-Ta germline . no 637 .
srip38869 chr14 95605326 95605326 + L1-Ta germline . no 637 DICER1
srip38960 chr15 20022208 20022208 - L1-Ta germline . no 637 .
srip39084 chr15 24383900 24383900 + L1-Ta germline . yes 637 .
srip40757 chr15 51875289 51875289 - L1-Ta germline . no 637 DMXL2
srip40816 chr15 53448042 53448042 - L1-Ta germline . no 637 .
srip41285 chr15 58012013 58012013 - L1-Ta germline . no 637 .
srip43275 chr15 100931158 100931158 - L1-Ta germline . no 637 .
srip43826 chr16 7925421 7925421 + L1-Ta germline . no 637 .
srip44149 chr16 18832538 18832538 - L1-Ta germline . no 637 SMG1
srip45811 chr16 61079187 61079187 + L1-Ta germline . no 637 .
srip47225 chr17 28398312 28398312 + L1-Ta germline . no 637 EFCAB5
srip47464 chr17 32192799 32192799 + L1-Ta germline . yes 637 ACCN1
srip48686 chr18 5332408 5332408 - L1-Ta germline . no 637 .
srip49495 chr18 30185593 30185593 - L1-Ta germline . no 637 .
srip50031 chr18 49216228 49216228 - L1-Ta germline . no 637 .
srip50848 chr18 58172211 58172211 - L1-Ta germline . no 637 .
srip51030 chr18 59763726 59763726 - L1-Ta germline . no 637 PIGN
srip51105 chr18 61030433 61030433 - L1-Ta germline . no 637 KDSR
srip51191 chr18 63446487 63446487 - L1-Ta germline . no 637 CDH7
srip51261 chr18 68413712 68413712 - L1-Ta germline . no 637 .
srip51331 chr18 69024727 69024727 + L1-Ta germline . yes 637 .
srip52196 chr19 27735992 27735992 - L1-Ta germline . no 637 .
srip52478 chr19 55091547 55091547 - L1-Ta germline . no 637 LILRA2
srip52835 chr2 11930045 11930045 - L1-Ta germline . no 637 LPIN1
srip54357 chr2 41777137 41777137 - L1-Ta germline . no 637 .
srip54553 chr2 42051402 42051402 + L1-Ta germline . no 637 .
srip54933 chr2 53460056 53460056 + L1-Ta germline . no 637 .
srip55609 chr2 73354355 73354355 - L1-Ta germline . no 637 .
srip55931 chr2 81834768 81834768 - L1-Ta germline . no 637 .
srip56118 chr2 82098027 82098027 + L1-Ta germline . no 637 .
srip56278 chr2 83068216 83068216 + L1-Ta germline . yes 637 .
srip56967 chr2 108631988 108631988 - L1-Ta germline . no 637 .
srip57310 chr2 116246475 116246475 + L1-Ta germline . no 637 DPP10
srip57589 chr2 126510571 126510571 + L1-Ta germline . yes 637 .
srip58332 chr2 142788891 142788891 - L1-Ta germline . no 637 LRP1B
srip58620 chr2 144624534 144624534 + L1-Ta germline . yes 637 .
srip59436 chr2 153864262 153864262 - L1-Ta germline . no 637 .
srip59911 chr2 176346680 176346680 - L1-Ta germline . no 637 .
srip61295 chr2 205631655 205631655 - L1-Ta germline . no 637 PARD3B
srip61608 chr2 212707182 212707182 + L1-Ta germline . no 637 ERBB4
srip61726 chr2 214647628 214647628 - L1-Ta germline . no 637 SPAG16
srip61794 chr2 218176494 218176494 + L1-Ta germline . yes 637 DIRC3
srip62600 chr2 235519794 235519794 + L1-Ta germline . no 637 .
srip62685 chr2 239902375 239902375 - L1-Ta germline . no 637 .
srip63665 chr20 19400466 19400466 - L1-Ta germline . no 637 SLC24A3
srip63951 chr20 23412776 23412776 + L1-Ta germline . yes 637 .
srip64736 chr20 41952103 41952103 - L1-Ta germline . no 637 .
srip65134 chr20 51779972 51779972 - L1-Ta germline . yes 637 TSHZ2
srip65882 chr21 19517309 19517309 - L1-Ta germline . no 637 .
srip66891 chr21 29069173 29069173 + L1-Ta germline . no 637 .
srip67462 chr22 22486374 22486374 - L1-Ta germline . no 637 IGL@
srip67723 chr22 22715585 22715585 + L1-Ta germline . no 637 IGL@
srip67892 chr22 28455877 28455877 - L1-Ta germline . no 637 TTC28
srip68210 chr22 29065287 29065287 + L1-Ta germline . yes 637 TTC28
srip68767 chr22 44324601 44324601 - L1-Ta germline . no 637 PNPLA3
srip69655 chr3 656444 656444 - L1-Ta germline validated no 637 .
srip69725 chr3 2050178 2050178 + L1-Ta germline . yes 637 .
srip69852 chr3 4080917 4080917 - L1-Ta germline . yes 637 .
srip70365 chr3 20748812 20748812 - L1-Ta germline validated no 637 .
srip70879 chr3 26439488 26439488 - L1-Ta germline . no 637 .
srip71183 chr3 27135216 27135216 + L1-Ta germline . no 637 .
srip71978 chr3 41821477 41821477 + L1-Ta germline . yes 637 ULK4
srip72090 chr3 46824583 46824583 - L1-Ta germline . no 637 .
srip73561 chr3 75005137 75005137 + L1-Ta germline . no 637 .
srip73950 chr3 77812776 77812776 - L1-Ta germline . no 637 .
srip74581 chr3 81770349 81770349 + L1-Ta germline . yes 637 GBE1
srip75564 chr3 85576552 85576552 + L1-Ta germline . no 637 CADM2
srip75940 chr3 90389460 90389460 + L1-Ta germline . no 637 .
srip76370 chr3 103275235 103275235 - L1-Ta germline . no 637 .
srip76459 chr3 105473860 105473860 - L1-Ta germline . no 637 CBLB
srip76556 chr3 108924737 108924737 + L1-Ta germline . yes 637 .
srip76633 chr3 109836400 109836400 - L1-Ta germline . no 637 .
srip76870 chr3 120807965 120807965 + L1-Ta germline . no 637 STXBP5L
srip77095 chr3 123590712 123590712 + L1-Ta germline validated no 637 MYLK
srip77347 chr3 129972765 129972765 + L1-Ta germline . yes 637 COL6A4P2
srip77411 chr3 130352893 130352893 + L1-Ta germline . yes 637 COL6A6
srip77550 chr3 132664831 132664831 - L1-Ta germline . no 637 .
srip77799 chr3 137073450 137073450 + L1-Ta germline . no 637 .
srip77903 chr3 139135073 139135073 - L1-Ta germline . no 637 LOC100507291
srip78903 chr3 154632590 154632590 + L1-Ta germline . yes 637 .
srip79199 chr3 158813156 158813156 - L1-Ta germline . yes 637 IQCJ;IQCJ-SCHIP1
srip79856 chr3 169269954 169269954 + L1-Ta germline . no 637 MECOM
srip79946 chr3 172749131 172749131 - L1-Ta germline . no 637 SPATA16
srip80197 chr3 175677955 175677955 - L1-Ta germline . no 637 .
srip80297 chr3 176091321 176091321 + L1-Ta germline . no 637 .
srip80871 chr3 181192904 181192904 + L1-Ta germline . no 637 .
srip80898 chr3 182952475 182952475 - L1-Ta germline . no 637 MCF2L2
srip81577 chr3 187835306 187835306 - L1-Ta germline . no 637 .
srip82614 chr4 15849204 15849204 + L1-Ta germline . no 637 CD38
srip82683 chr4 16950725 16950725 + L1-Ta germline . yes 637 .
srip84651 chr4 47007779 47007779 - L1-Ta germline . no 637 .
srip84926 chr4 48416463 48416463 - L1-Ta germline . no 637 SLAIN2
srip84979 chr4 48738022 48738022 + L1-Ta germline . no 637 FRYL
srip85607 chr4 58888335 58888335 + L1-Ta germline . no 637 .
srip85841 chr4 59442445 59442445 - L1-Ta germline . no 637 .
srip87146 chr4 79032904 79032904 + L1-Ta germline . yes 637 FRAS1
srip87410 chr4 80864880 80864880 + L1-Ta germline . yes 637 ANTXR2
srip87456 chr4 80894074 80894074 + L1-Ta germline . yes 637 ANTXR2
srip88048 chr4 88486275 88486275 + L1-Ta germline . yes 637 .
srip88324 chr4 99513572 99513572 - L1-Ta germline . no 637 TSPAN5
srip89259 chr4 107492188 107492188 - L1-Ta germline . no 637 .
srip89879 chr4 112628959 112628959 + L1-Ta germline . no 637 .
srip90308 chr4 115132696 115132696 + L1-Ta germline . no 637 .
srip90717 chr4 118765260 118765260 + L1-Ta germline . no 637 .
srip92286 chr4 136006539 136006539 + L1-Ta germline . no 637 .
srip93147 chr4 147543284 147543284 + L1-Ta germline . no 637 .
srip94439 chr4 170281916 170281916 - L1-Ta germline . no 637 .
srip94494 chr4 170436610 170436610 - L1-Ta germline . no 637 NEK1
srip95085 chr4 182695155 182695155 - L1-Ta germline . no 637 .
srip95723 chr5 7603653 7603653 - L1-Ta germline . no 637 ADCY2
srip96837 chr5 20644380 20644380 - L1-Ta germline . no 637 .
srip97318 chr5 30693779 30693779 - L1-Ta germline . no 637 .
srip98813 chr5 51488295 51488295 - L1-Ta germline . no 637 .
srip101419 chr5 99981611 99981611 + L1-Ta germline . yes 637 .
srip101506 chr5 105483500 105483500 - L1-Ta germline . no 637 .
srip102560 chr5 110474800 110474800 + L1-Ta germline . yes 637 .
srip102612 chr5 110643939 110643939 + L1-Ta germline . yes 637 CAMK4
srip103002 chr5 124907258 124907258 + L1-Ta germline . yes 637 .
srip103908 chr5 138420464 138420464 + L1-Ta germline . yes 637 SIL1
srip104240 chr5 144473640 144473640 + L1-Ta germline . no 637 .
srip104906 chr5 155488954 155488954 - L1-Ta germline . yes 637 .
srip105523 chr5 159351193 159351193 - L1-Ta germline . no 637 ADRA1B
srip105857 chr5 165848548 165848548 + L1-Ta germline . yes 637 .
srip106033 chr5 172829796 172829796 - L1-Ta germline . no 637 .
srip106106 chr5 177205284 177205284 + L1-Ta germline . no 637 FAM153A
srip106604 chr6 2418002 2418002 - L1-Ta germline . no 637 .
srip108187 chr6 39645329 39645329 - L1-Ta germline . yes 637 KIF6
srip108676 chr6 46310294 46310294 + L1-Ta germline . no 637 .
srip108851 chr6 55594843 55594843 - L1-Ta germline . no 637 .
srip109431 chr6 63368195 63368195 + L1-Ta germline . no 637 .
srip109827 chr6 66787597 66787597 - L1-Ta germline . no 637 .
srip109882 chr6 67313668 67313668 + L1-Ta germline . yes 637 .
srip110128 chr6 70726265 70726265 + L1-Ta germline . yes 637 COL19A1
srip110414 chr6 74865444 74865444 - L1-Ta germline . no 637 .
srip111998 chr6 91669505 91669505 - L1-Ta germline . no 637 .
srip112904 chr6 113030984 113030984 + L1-Ta germline . no 637 LOC100287612
srip113082 chr6 115899917 115899917 - L1-Ta germline . no 637 .
srip113401 chr6 125643206 125643206 + L1-Ta germline . yes 637 .
srip113559 chr6 136712687 136712687 + L1-Ta germline . yes 637 MAP7
srip113825 chr6 142450109 142450109 - L1-Ta germline . no 637 .
srip114171 chr6 145500938 145500938 - L1-Ta germline . no 637 .
srip114330 chr6 148163569 148163569 + L1-Ta germline . no 637 .
srip114927 chr6 156361300 156361300 + L1-Ta germline . no 637 .
srip115205 chr6 160829673 160829673 - L1-Ta germline . no 637 SLC22A3
srip115426 chr6 162181256 162181256 + L1-Ta germline . no 637 PARK2
srip116518 chr7 25081462 25081462 - L1-Ta germline . no 637 .
srip116640 chr7 28783416 28783416 - L1-Ta germline . no 637 CREB5
srip116704 chr7 30484894 30484894 + L1-Ta germline . no 637 NOD1
srip118549 chr7 69668336 69668336 + L1-Ta germline . yes 637 AUTS2
srip118608 chr7 69828469 69828469 + L1-Ta germline . no 637 AUTS2
srip118928 chr7 75335791 75335791 - L1-Ta germline . no 637 HIP1
srip120685 chr7 92857543 92857543 - L1-Ta germline . no 637 .
srip121428 chr7 107829247 107829247 + L1-Ta germline . no 637 NRCAM
srip122055 chr7 109548699 109548699 + L1-Ta germline . no 637 .
srip122312 chr7 111609264 111609264 + L1-Ta germline . yes 637 DOCK4
srip122474 chr7 113139394 113139394 + L1-Ta germline . yes 637 .
srip122667 chr7 124451313 124451313 - L1-Ta germline validated no 637 .
srip122991 chr7 129507566 129507566 + L1-Ta germline . no 637 UBE2H
srip123049 chr7 130386823 130386823 - L1-Ta germline . no 637 .
srip123184 chr7 141620449 141620449 - L1-Ta germline . no 637 .
srip123438 chr7 145063368 145063368 + L1-Ta germline . yes 637 .
srip124328 chr8 5829277 5829277 - L1-Ta germline . no 637 .
srip124767 chr8 9597567 9597567 + L1-Ta germline . yes 637 TNKS
srip124988 chr8 18768149 18768149 + L1-Ta germline . yes 637 PSD3
srip126968 chr8 71583563 71583563 - L1-Ta germline . no 637 XKR9
srip128491 chr8 97911008 97911008 + L1-Ta germline . yes 637 PGCP
srip128646 chr8 100233000 100233000 - L1-Ta germline . no 637 VPS13B
srip128904 chr8 114072203 114072203 - L1-Ta germline . no 637 CSMD3
srip129651 chr8 119721695 119721695 - L1-Ta germline . no 637 SAMD12-AS1
srip129969 chr8 129465157 129465157 - L1-Ta germline . no 637 .
srip130283 chr8 134741792 134741792 + L1-Ta germline . no 637 .
srip130391 chr8 137450317 137450317 - L1-Ta germline . yes 637 .
srip130497 chr9 1337904 1337904 - L1-Ta germline . no 637 .
srip131096 chr9 6290488 6290488 + L1-Ta germline . no 637 .
srip131610 chr9 10137698 10137698 + L1-Ta germline . yes 637 PTPRD
srip133188 chr9 32463884 32463884 - L1-Ta germline . no 637 DDX58
srip133985 chr9 73048280 73048280 + L1-Ta germline . no 637 .
srip134094 chr9 80014129 80014129 + L1-Ta germline . no 637 VPS13A
srip134561 chr9 98465870 98465870 + L1-Ta germline . yes 637 .
srip134723 chr9 102615582 102615582 - L1-Ta germline . no 637 NR4A3
srip134782 chr9 103749297 103749297 + L1-Ta germline . no 637 .
srip135105 chr9 105162482 105162482 - L1-Ta germline . no 637 .
srip136330 chrX 11731399 11731399 + L1-Ta germline . yes 637 .
srip136885 chrX 34837319 34837319 - L1-Ta germline . no 637 .
srip136948 chrX 45449426 45449426 + L1-Ta germline . no 637 .
srip137004 chrX 49731196 49731196 - L1-Ta germline . no 637 CLCN5
srip137040 chrX 49784005 49784005 - L1-Ta germline . no 637 CLCN5
srip137540 chrX 55585146 55585146 - L1-Ta germline . no 637 .
srip137975 chrX 63233094 63233094 - L1-Ta germline . no 637 .
srip138279 chrX 64430988 64430988 + L1-Ta germline . no 637 .
srip138467 chrX 72606851 72606851 + L1-Ta germline . no 637 .
srip138725 chrX 75543182 75543182 - L1-Ta germline . no 637 .
srip139015 chrX 75949601 75949601 + L1-Ta germline . no 637 .
srip139097 chrX 77696853 77696853 - L1-Ta germline . no 637 .
srip139324 chrX 85609830 85609830 + L1-Ta germline . yes 637 DACH2
srip139501 chrX 94857127 94857127 + L1-Ta germline . yes 637 .
srip140150 chrX 105718545 105718545 + L1-Ta germline . yes 637 .
srip140549 chrX 117098155 117098155 + L1-Ta germline . yes 637 KLHL13
srip140828 chrX 120397638 120397638 - L1-Ta germline . no 637 .
srip141219 chrX 129525220 129525220 - L1-Ta germline . no 637 .
srip141422 chrX 130140534 130140534 + L1-Ta germline . no 637 .
srip141599 chrX 137146500 137146500 + L1-Ta germline . no 637 .
srip141983 chrX 141571641 141571641 + L1-Ta germline . yes 637 .
srip142107 chrX 154745667 154745667 - L1-Ta germline . no 637 TMLHE