euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

231 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip127 chr1 24775164 24775164 + L1-Ta germline . no 200 NIPAL3
srip515 chr1 42483961 42483961 + L1-Ta germline . no 200 HIVEP3
srip2009 chr1 81855783 81855783 + L1-Ta germline . no 200 .
srip2100 chr1 84833989 84833989 + L1-Ta germline . no 200 UOX
srip3890 chr1 119553352 119553352 + L1-Ta germline . no 200 .
srip4043 chr1 149216797 149216797 + L1-Ta germline . no 200 .
srip5414 chr1 179575362 179575362 - L1-Ta germline . no 200 TDRD5
srip6373 chr1 207579511 207579511 + L1-Ta germline . no 200 .
srip7407 chr1 242311577 242311577 + L1-Ta germline validated no 200 PLD5
srip7460 chr1 248454039 248454039 - L1-pre-Ta germline . no 200 .
srip8045 chr10 22492537 22492537 - L1-Ta germline . no 200 .
srip8426 chr10 25707687 25707687 - L1-Ta germline . no 200 GPR158
srip8649 chr10 27775762 27775762 + L1-Ta germline . no 200 .
srip9691 chr10 74767506 74767506 - L1-Ta germline . no 200 P4HA1
srip11212 chr10 110453470 110453470 + L1-Ta germline . no 200 .
srip13795 chr11 33670123 33670123 + L1-Ta germline . no 200 C11orf41
srip14366 chr11 41831811 41831811 - L1-Ta germline . no 200 .
srip14564 chr11 43356955 43356955 + L1-Ta germline . no 200 API5
srip14766 chr11 48360753 48360753 - L1-Ta germline . no 200 .
srip15039 chr11 50399980 50399980 - L1-Ta germline . no 200 .
srip15107 chr11 55011014 55011014 + L1-Ta germline . no 200 .
srip15358 chr11 58171838 58171838 + L1-Ta germline . no 200 .
srip15837 chr11 63145370 63145370 + L1-Ta germline . no 200 SLC22A9
srip16475 chr11 83313935 83313935 - L1-Ta germline . no 200 DLG2
srip16519 chr11 83652350 83652350 - L1-Ta germline . no 200 DLG2
srip17211 chr11 94684368 94684368 + L1-Ta germline . no 200 .
srip18279 chr11 114895524 114895524 + L1-Ta germline . no 200 .
srip19324 chr11 134305648 134305648 - L1-Ta germline . no 200 .
srip19663 chr12 8105629 8105629 + L1-Ta germline . no 200 .
srip20975 chr12 33325793 33325793 - L1-Ta germline . no 200 .
srip22263 chr12 43256986 43256986 - L1-Ta germline . no 200 .
srip24026 chr12 79338037 79338037 - L1-Ta germline . no 200 SYT1
srip24431 chr12 84955216 84955216 - L1-Ta germline . no 200 .
srip24643 chr12 84965148 84965148 + L1-Ta germline . no 200 .
srip25139 chr12 95808527 95808527 - L1-Ta germline . no 200 .
srip25182 chr12 97365530 97365530 - L1-Ta germline . no 200 .
srip25643 chr12 117814447 117814447 - L1-Ta germline . no 200 .
srip26761 chr13 21817193 21817193 - L1-Ta germline . no 200 .
srip27015 chr13 22489805 22489805 + L1-Ta germline . no 200 .
srip27486 chr13 27488126 27488126 + L1-Ta germline . no 200 .
srip28017 chr13 42771403 42771403 + L1-Ta germline . no 200 DGKH
srip29055 chr13 61462336 61462336 - L1-Ta germline . no 200 .
srip29862 chr13 65549225 65549225 - L1-Ta germline . no 200 .
srip30433 chr13 74613207 74613207 - L1-Ta germline . no 200 KLF12
srip31027 chr13 79259793 79259793 - L1-Ta germline . no 200 .
srip31433 chr13 85871602 85871602 - L1-Ta germline . no 200 .
srip32017 chr13 86340153 86340153 - L1-Ta germline . no 200 .
srip33502 chr13 104296223 104296223 - L1-Ta germline . no 200 .
srip33659 chr13 104395943 104395943 - L1-Ta germline . no 200 .
srip33801 chr13 105280146 105280146 - L1-Ta germline . no 200 .
srip34292 chr14 19000969 19000969 + L1-Ta germline . no 200 .
srip35254 chr14 28301261 28301261 + L1-Ta germline . no 200 .
srip35462 chr14 31150809 31150809 - L1-Ta germline . no 200 SCFD1
srip36036 chr14 36674760 36674760 + L1-Ta germline . no 200 .
srip36080 chr14 37769602 37769602 - L1-Ta germline . no 200 MIPOL1
srip37156 chr14 52667758 52667758 - L1-Ta germline . no 200 .
srip37356 chr14 59220402 59220402 + L1-Ta germline . no 200 .
srip38614 chr14 86381796 86381796 - L1-Ta germline . no 200 .
srip39332 chr15 28175791 28175791 - L1-Ta germline . no 200 OCA2
srip41252 chr15 56251153 56251153 + L1-Ta germline . no 200 NEDD4
srip42613 chr15 85140909 85140909 + L1-Ta germline . no 200 .
srip42975 chr15 98199968 98199968 + L1-Ta germline . no 200 .
srip43405 chr15 100931161 100931161 - L1-Ta germline . no 200 .
srip43646 chr16 6793831 6793831 + L1-Ta germline . no 200 RBFOX1
srip44780 chr16 32523893 32523893 - L1-Ta germline . no 200 .
srip45064 chr16 32525611 32525611 - L1-Ta germline . no 200 .
srip45488 chr16 33992430 33992430 + L1-Ta germline . no 200 .
srip45879 chr16 61079188 61079188 + L1-Ta germline . no 200 .
srip48443 chr17 68357409 68357409 + L1-Ta germline . no 200 .
srip49231 chr18 27219200 27219200 - L1-Ta germline . no 200 .
srip50008 chr18 49216219 49216219 - L1-Ta germline . no 200 .
srip50349 chr18 51425726 51425726 - L1-Ta germline . no 200 .
srip50407 chr18 51488332 51488332 - L1-Ta germline . no 200 .
srip51006 chr18 59579975 59579975 + L1-Ta germline . no 200 .
srip51673 chr18 74515287 74515287 - L1-Ta germline . no 200 LOC100131655
srip52191 chr19 27734292 27734292 - L1-Ta germline . no 200 .
srip52771 chr2 6798288 6798288 - L1-Ta germline . no 200 .
srip52812 chr2 7050603 7050603 + L1-Ta germline . no 200 .
srip53438 chr2 23191000 23191000 - L1-Ta germline . no 200 .
srip53953 chr2 35879359 35879359 + L1-Ta germline . no 200 .
srip54223 chr2 36570243 36570243 - L1-Ta germline . no 200 .
srip54409 chr2 41913652 41913652 - L1-Ta germline . no 200 .
srip54604 chr2 42051403 42051403 + L1-Ta germline . no 200 .
srip54769 chr2 50190131 50190131 + L1-Ta germline . no 200 NRXN1
srip55030 chr2 63593495 63593495 + L1-Ta germline . no 200 WDPCP
srip55755 chr2 78992043 78992043 - L1-Ta germline . no 200 .
srip56247 chr2 82098043 82098043 + L1-Ta germline . no 200 .
srip56504 chr2 83188325 83188325 + L1-Ta germline . no 200 .
srip56762 chr2 102912450 102912450 + L1-Ta germline . no 200 .
srip56902 chr2 106163164 106163164 + L1-Ta germline . no 200 .
srip57746 chr2 129573984 129573984 + L1-Ta germline . no 200 .
srip57822 chr2 132868182 132868182 - L1-Ta germline . no 200 .
srip58218 chr2 141852908 141852908 - L1-Ta germline . no 200 LRP1B
srip58579 chr2 144010793 144010793 + L1-Ta germline . no 200 ARHGAP15
srip60140 chr2 178676245 178676245 - L1-Ta germline . no 200 PDE11A
srip60804 chr2 191478714 191478714 - L1-Ta germline . no 200 .
srip61137 chr2 199779914 199779914 + L1-Ta germline . no 200 .
srip61683 chr2 213114174 213114174 + L1-Ta germline . no 200 ERBB4
srip62356 chr2 230341559 230341559 + L1-Ta germline . no 200 DNER
srip64012 chr20 25844027 25844027 + L1-Ta germline . no 200 .
srip64802 chr20 41952105 41952105 - L1-Ta germline . no 200 .
srip66038 chr21 19517313 19517313 - L1-Ta germline . no 200 .
srip66264 chr21 23626191 23626191 - L1-Ta germline . no 200 .
srip66874 chr21 29069171 29069171 + L1-Ta germline . no 200 .
srip67836 chr22 22715588 22715588 + L1-Ta germline . no 200 IGL@
srip67906 chr22 28455902 28455902 - L1-Ta germline . no 200 TTC28
srip69642 chr3 656435 656435 - L1-Ta germline . no 200 .
srip70078 chr3 17409573 17409573 - L1-Ta germline . no 200 TBC1D5
srip70350 chr3 20090517 20090517 - L1-pre-Ta germline . no 200 KAT2B
srip70807 chr3 24987874 24987874 - L1-Ta germline . no 200 .
srip71928 chr3 38626082 38626082 + L1-Ta germline . no 200 SCN5A
srip73417 chr3 59852903 59852903 + L1-Ta germline . no 200 FHIT
srip74850 chr3 82144854 82144854 - L1-Ta germline . no 200 .
srip75613 chr3 85576568 85576568 + L1-Ta germline . no 200 CADM2
srip76446 chr3 105316337 105316337 + L1-Ta germline . no 200 .
srip76623 chr3 109751770 109751770 + L1-Ta germline . no 200 .
srip76749 chr3 115834578 115834578 + L1-Ta germline . no 200 LSAMP
srip76820 chr3 119046413 119046413 + L1-Ta germline . no 200 ARHGAP31
srip77285 chr3 123590726 123590726 + L1-Ta germline . no 200 MYLK
srip78149 chr3 143121759 143121759 - L1-Ta germline . no 200 SLC9A9
srip78323 chr3 147328349 147328349 - L1-Ta germline . no 200 .
srip78608 chr3 151148544 151148544 - L1-Ta germline . no 200 MED12L
srip78852 chr3 151688088 151688088 - L1-Ta germline . no 200 .
srip79329 chr3 162717306 162717306 + L1-Ta germline . no 200 .
srip79945 chr3 172749118 172749118 - L1-Ta germline . no 200 SPATA16
srip80224 chr3 175677970 175677970 - L1-Ta germline . no 200 .
srip80404 chr3 176091333 176091333 + L1-Ta germline . no 200 .
srip81526 chr3 186372141 186372141 + L1-Ta germline . no 200 .
srip81654 chr3 187835309 187835309 - L1-Ta germline . no 200 .
srip82594 chr4 14849038 14849038 + L1-Ta germline . no 200 .
srip83120 chr4 18162689 18162689 - L1-Ta germline . no 200 .
srip83258 chr4 18194357 18194357 - L1-Ta germline . no 200 .
srip83353 chr4 20246382 20246382 + L1-Ta germline . no 200 .
srip83840 chr4 29321851 29321851 + L1-Ta germline . no 200 .
srip84054 chr4 37952113 37952113 - L1-Ta germline . no 200 TBC1D1
srip84892 chr4 47007790 47007790 - L1-Ta germline . no 200 .
srip86205 chr4 66413932 66413932 + L1-Ta germline . no 200 EPHA5
srip88138 chr4 97784785 97784785 - L1-Ta germline . no 200 .
srip89999 chr4 112628973 112628973 + L1-Ta germline . no 200 .
srip91589 chr4 132181648 132181648 - L1-Ta germline . no 200 .
srip92781 chr4 138177325 138177325 + L1-Ta germline . no 200 .
srip93119 chr4 147225296 147225296 + L1-Ta germline . no 200 SLC10A7
srip93865 chr4 158907272 158907272 - L1-Ta germline . no 200 .
srip95478 chr5 1645773 1645773 + L1-Ta germline . no 200 .
srip96055 chr5 8749515 8749515 + L1-Ta germline . no 200 .
srip96366 chr5 11391276 11391276 + L1-Ta germline . no 200 CTNND2
srip96381 chr5 12133255 12133255 + L1-Ta germline . no 200 .
srip96440 chr5 13231891 13231891 - L1-Ta germline . no 200 .
srip96914 chr5 21207732 21207732 + L1-Ta germline . no 200 .
srip96948 chr5 23023389 23023389 - L1-Ta germline . no 200 .
srip97045 chr5 24711285 24711285 + L1-Ta germline . no 200 .
srip97965 chr5 33633348 33633348 - L1-Ta germline . no 200 ADAMTS12
srip98609 chr5 46396964 46396964 + L1-Ta germline . no 200 .
srip99494 chr5 68263461 68263461 - L1-Ta germline . no 200 .
srip99767 chr5 83619783 83619783 - L1-Ta germline . no 200 EDIL3
srip100087 chr5 84239673 84239673 - L1-Ta germline . no 200 .
srip100778 chr5 89450781 89450781 + L1-Ta germline . no 200 .
srip101695 chr5 105935373 105935373 + L1-Ta germline . no 200 .
srip102262 chr5 109480258 109480258 - L1-Ta germline . no 200 .
srip103379 chr5 125040045 125040045 + L1-Ta germline . no 200 .
srip105238 chr5 155619865 155619865 + L1-Ta germline . no 200 .
srip105580 chr5 159351199 159351199 - L1-Ta germline . no 200 ADRA1B
srip105725 chr5 160435665 160435665 - L1-Ta germline . no 200 .
srip107093 chr6 13191033 13191033 + L1-Ta germline . no 200 PHACTR1
srip107553 chr6 13503049 13503049 + L1-Ta germline . no 200 .
srip107728 chr6 19258212 19258212 + L1-Ta germline . no 200 .
srip108091 chr6 32613444 32613444 + L1-Ta germline . no 200 .
srip108279 chr6 45852697 45852697 - L1-Ta germline . no 200 .
srip108671 chr6 46310291 46310291 + L1-Ta germline . no 200 .
srip109188 chr6 61942547 61942547 - L1-Ta germline . no 200 .
srip109552 chr6 63368207 63368207 + L1-Ta germline . no 200 .
srip109963 chr6 68112755 68112755 - L1-Ta germline . no 200 .
srip111081 chr6 77980650 77980650 - L1-Ta germline . no 200 .
srip111216 chr6 78649689 78649689 - L1-Ta germline . no 200 .
srip111275 chr6 78749392 78749392 + L1-Ta germline . no 200 .
srip112185 chr6 91669521 91669521 - L1-Ta germline . no 200 .
srip112292 chr6 91767655 91767655 + L1-Ta germline . no 200 .
srip113020 chr6 114091140 114091140 + L1-Ta germline . no 200 LOC100652953
srip113052 chr6 115350723 115350723 + L1-Ta germline . no 200 .
srip113774 chr6 142450101 142450101 - L1-Ta germline . no 200 .
srip114445 chr6 148163587 148163587 + L1-Ta germline . no 200 .
srip114733 chr6 148195789 148195789 + L1-Ta germline . no 200 .
srip114887 chr6 154215663 154215663 + L1-Ta germline . no 200 .
srip115080 chr6 157968737 157968737 - L1-Ta germline . no 200 ZDHHC14
srip116127 chr7 8663314 8663314 - L1-Ta germline . no 200 NXPH1
srip116178 chr7 8886715 8886715 + L1-Ta germline . no 200 .
srip117180 chr7 46350348 46350348 - L1-Ta germline . no 200 .
srip117489 chr7 52789472 52789472 + L1-Ta germline . no 200 .
srip117970 chr7 61778308 61778308 - L1-Ta germline . no 200 .
srip118197 chr7 62492930 62492930 + L1-Ta germline . no 200 .
srip118873 chr7 70188676 70188676 - L1-Ta germline . no 200 AUTS2
srip119863 chr7 84901724 84901724 - L1-Ta germline . no 200 .
srip120233 chr7 85044737 85044737 + L1-Ta germline . no 200 .
srip120758 chr7 93146611 93146611 - L1-Ta germline . no 200 CALCR
srip121182 chr7 107410719 107410719 - L1-Ta germline . no 200 SLC26A3
srip121793 chr7 107829263 107829263 + L1-Ta germline . no 200 NRCAM
srip121990 chr7 108325661 108325661 + L1-Ta germline . no 200 .
srip124044 chr8 4452894 4452894 - L1-Ta germline . no 200 CSMD1
srip124562 chr8 5829283 5829283 - L1-Ta germline . no 200 .
srip125050 chr8 21496230 21496230 + L1-Ta germline . no 200 .
srip126924 chr8 67381885 67381885 - L1-Ta germline . no 200 .
srip127009 chr8 72013166 72013166 + L1-Ta germline . no 200 .
srip127333 chr8 72399221 72399221 - L1-Ta germline . no 200 .
srip128087 chr8 84573988 84573988 + L1-Ta germline . no 200 .
srip128244 chr8 87315040 87315040 + L1-Ta germline . no 200 .
srip128442 chr8 92186265 92186265 - L1-Ta germline . no 200 LRRC69
srip128777 chr8 107557032 107557032 - L1-Ta germline . no 200 OXR1
srip129488 chr8 115881781 115881781 + L1-Ta germline . no 200 .
srip130107 chr8 131041219 131041219 + L1-Ta germline . no 200 .
srip130287 chr8 134889233 134889233 - L1-Ta germline . no 200 .
srip130354 chr8 134972242 134972242 + L1-pre-Ta germline . no 200 .
srip130731 chr9 5491418 5491418 + L1-Ta germline . no 200 .
srip131143 chr9 6290494 6290494 + L1-Ta germline . no 200 .
srip131384 chr9 7741406 7741406 + L1-Ta germline . no 200 .
srip133450 chr9 32463894 32463894 - L1-Ta germline . no 200 DDX58
srip133683 chr9 35883708 35883708 + L1-Ta germline . no 200 .
srip133956 chr9 72777411 72777411 - L1-Ta germline . no 200 LOC100507244;MAMDC2
srip134689 chr9 100675534 100675534 - L1-Ta germline . no 200 C9orf156
srip135991 chr9 118083880 118083880 - L1-Ta germline . no 200 DEC1
srip136163 chr9 136105857 136105857 - L1-Ta germline . no 200 .
srip136529 chrX 14152012 14152012 - L1-Ta germline . no 200 .
srip136879 chrX 34810641 34810641 - L1-Ta germline . no 200 .
srip138339 chrX 66982754 66982754 - L1-Ta germline . no 200 .
srip140076 chrX 102363174 102363174 + L1-Ta germline . no 200 .
srip140302 chrX 111229559 111229559 - L1-Ta germline . no 200 TRPC5
srip140742 chrX 119892831 119892831 - L1-Ta germline . no 200 .
srip141100 chrX 123230117 123230117 - L1-Ta germline . no 200 STAG2
srip141400 chrX 129525281 129525281 - L1-Ta germline . no 200 .
srip141484 chrX 133854084 133854084 + L1-Ta germline . no 200 .
srip142174 chrX 154790189 154790189 + L1-Ta germline . no 200 TMLHE
srip142221 chrY 9951878 9951878 - L1-pre-Ta germline . no 200 .