euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

227 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip94 chr1 17229479 17229479 - L1-Ta germline . no 199 .
srip514 chr1 42483961 42483961 + L1-Ta germline . no 199 HIVEP3
srip2008 chr1 81855783 81855783 + L1-Ta germline . no 199 .
srip2099 chr1 84833989 84833989 + L1-Ta germline . no 199 UOX
srip3889 chr1 119553352 119553352 + L1-Ta germline . no 199 .
srip4042 chr1 149216797 149216797 + L1-Ta germline . no 199 .
srip5802 chr1 191601021 191601021 + L1-Ta germline . no 199 .
srip6372 chr1 207579511 207579511 + L1-Ta germline . no 199 .
srip7253 chr1 241262724 241262724 - L1-pre-Ta germline . no 199 RGS7
srip7406 chr1 242311577 242311577 + L1-Ta germline validated no 199 PLD5
srip7459 chr1 248454039 248454039 - L1-pre-Ta germline . no 199 .
srip8425 chr10 25707687 25707687 - L1-Ta germline . no 199 GPR158
srip8648 chr10 27775762 27775762 + L1-Ta germline . no 199 .
srip9690 chr10 74767506 74767506 - L1-Ta germline . no 199 P4HA1
srip11211 chr10 110453470 110453470 + L1-Ta germline . no 199 .
srip13794 chr11 33670123 33670123 + L1-Ta germline . no 199 C11orf41
srip14365 chr11 41831811 41831811 - L1-Ta germline . no 199 .
srip14563 chr11 43356955 43356955 + L1-Ta germline . no 199 API5
srip14765 chr11 48360753 48360753 - L1-Ta germline . no 199 .
srip15106 chr11 55011014 55011014 + L1-Ta germline . no 199 .
srip15357 chr11 58171838 58171838 + L1-Ta germline . no 199 .
srip16474 chr11 83313935 83313935 - L1-Ta germline . no 199 DLG2
srip16518 chr11 83652350 83652350 - L1-Ta germline . no 199 DLG2
srip17210 chr11 94684368 94684368 + L1-Ta germline . no 199 .
srip18278 chr11 114895524 114895524 + L1-Ta germline . no 199 .
srip19323 chr11 134305648 134305648 - L1-Ta germline . no 199 .
srip19662 chr12 8105629 8105629 + L1-Ta germline . no 199 .
srip20974 chr12 33325793 33325793 - L1-Ta germline . no 199 .
srip21743 chr12 38035076 38035076 + L1-Ta germline . no 199 .
srip22262 chr12 43256986 43256986 - L1-Ta germline . no 199 .
srip22822 chr12 48929052 48929052 + L1-Ta germline . no 199 .
srip24025 chr12 79338037 79338037 - L1-Ta germline . no 199 SYT1
srip24430 chr12 84955216 84955216 - L1-Ta germline . no 199 .
srip24642 chr12 84965148 84965148 + L1-Ta germline . no 199 .
srip25138 chr12 95808527 95808527 - L1-Ta germline . no 199 .
srip25181 chr12 97365530 97365530 - L1-Ta germline . no 199 .
srip25642 chr12 117814447 117814447 - L1-Ta germline . no 199 .
srip27014 chr13 22489805 22489805 + L1-Ta germline . no 199 .
srip27485 chr13 27488126 27488126 + L1-Ta germline . no 199 .
srip28016 chr13 42771403 42771403 + L1-Ta germline . no 199 DGKH
srip29054 chr13 61462336 61462336 - L1-Ta germline . no 199 .
srip29861 chr13 65549225 65549225 - L1-Ta germline . no 199 .
srip30432 chr13 74613207 74613207 - L1-Ta germline . no 199 KLF12
srip31026 chr13 79259793 79259793 - L1-Ta germline . no 199 .
srip31432 chr13 85871602 85871602 - L1-Ta germline . no 199 .
srip32016 chr13 86340153 86340153 - L1-Ta germline . no 199 .
srip32307 chr13 91149409 91149409 - L1-Ta germline . no 199 .
srip33501 chr13 104296223 104296223 - L1-Ta germline . no 199 .
srip33658 chr13 104395943 104395943 - L1-Ta germline . no 199 .
srip33800 chr13 105280146 105280146 - L1-Ta germline . no 199 .
srip34291 chr14 19000969 19000969 + L1-Ta germline . no 199 .
srip35253 chr14 28301261 28301261 + L1-Ta germline . no 199 .
srip35461 chr14 31150809 31150809 - L1-Ta germline . no 199 SCFD1
srip36035 chr14 36674760 36674760 + L1-Ta germline . no 199 .
srip36079 chr14 37769602 37769602 - L1-Ta germline . no 199 MIPOL1
srip37155 chr14 52667758 52667758 - L1-Ta germline . no 199 .
srip37355 chr14 59220402 59220402 + L1-Ta germline . no 199 .
srip38613 chr14 86381796 86381796 - L1-Ta germline . no 199 .
srip39331 chr15 28175791 28175791 - L1-Ta germline . no 199 OCA2
srip41251 chr15 56251153 56251153 + L1-Ta germline . no 199 NEDD4
srip41722 chr15 62169638 62169638 - L1-Ta germline . no 199 VPS13C
srip42612 chr15 85140909 85140909 + L1-Ta germline . no 199 .
srip42974 chr15 98199968 98199968 + L1-Ta germline . no 199 .
srip43404 chr15 100931161 100931161 - L1-Ta germline . no 199 .
srip43645 chr16 6793831 6793831 + L1-Ta germline . no 199 RBFOX1
srip45063 chr16 32525611 32525611 - L1-Ta germline . no 199 .
srip45487 chr16 33992430 33992430 + L1-Ta germline . no 199 .
srip45878 chr16 61079188 61079188 + L1-Ta germline . no 199 .
srip48442 chr17 68357409 68357409 + L1-Ta germline . no 199 .
srip49069 chr18 25797181 25797181 + L1-Ta germline . no 199 .
srip49230 chr18 27219200 27219200 - L1-Ta germline . no 199 .
srip50007 chr18 49216219 49216219 - L1-Ta germline . no 199 .
srip50348 chr18 51425726 51425726 - L1-Ta germline . no 199 .
srip50406 chr18 51488332 51488332 - L1-Ta germline . no 199 .
srip51005 chr18 59579975 59579975 + L1-Ta germline . no 199 .
srip51180 chr18 62947200 62947200 - L1-Ta germline . no 199 .
srip51672 chr18 74515287 74515287 - L1-Ta germline . no 199 LOC100131655
srip52190 chr19 27734292 27734292 - L1-Ta germline . no 199 .
srip52811 chr2 7050603 7050603 + L1-Ta germline . no 199 .
srip53437 chr2 23191000 23191000 - L1-Ta germline . no 199 .
srip53730 chr2 33092028 33092028 - L1-Ta germline . no 199 LINC00486
srip53735 chr2 33092073 33092073 - L1-Ta germline . no 199 LINC00486
srip53952 chr2 35879359 35879359 + L1-Ta germline . no 199 .
srip54222 chr2 36570243 36570243 - L1-Ta germline . no 199 .
srip54408 chr2 41913652 41913652 - L1-Ta germline . no 199 .
srip54603 chr2 42051403 42051403 + L1-Ta germline . no 199 .
srip54653 chr2 42051416 42051416 + L1-Ta germline . no 199 .
srip55029 chr2 63593495 63593495 + L1-Ta germline . no 199 WDPCP
srip55754 chr2 78992043 78992043 - L1-Ta germline . no 199 .
srip56246 chr2 82098043 82098043 + L1-Ta germline . no 199 .
srip56503 chr2 83188325 83188325 + L1-Ta germline . no 199 .
srip56761 chr2 102912450 102912450 + L1-Ta germline . no 199 .
srip56901 chr2 106163164 106163164 + L1-Ta germline . no 199 .
srip57745 chr2 129573984 129573984 + L1-Ta germline . no 199 .
srip57821 chr2 132868182 132868182 - L1-Ta germline . no 199 .
srip58217 chr2 141852908 141852908 - L1-Ta germline . no 199 LRP1B
srip58578 chr2 144010793 144010793 + L1-Ta germline . no 199 ARHGAP15
srip59852 chr2 170504673 170504673 + L1-Ta germline . no 199 C2orf77
srip60139 chr2 178676245 178676245 - L1-Ta germline . no 199 PDE11A
srip60380 chr2 179372783 179372783 - L1-Ta germline . no 199 .
srip60803 chr2 191478714 191478714 - L1-Ta germline . no 199 .
srip61136 chr2 199779914 199779914 + L1-Ta germline . no 199 .
srip62355 chr2 230341559 230341559 + L1-Ta germline . no 199 DNER
srip64011 chr20 25844027 25844027 + L1-Ta germline . no 199 .
srip64801 chr20 41952105 41952105 - L1-Ta germline . no 199 .
srip66037 chr21 19517313 19517313 - L1-Ta germline . no 199 .
srip66263 chr21 23626191 23626191 - L1-Ta germline . no 199 .
srip66873 chr21 29069171 29069171 + L1-Ta germline . no 199 .
srip67835 chr22 22715588 22715588 + L1-Ta germline . no 199 IGL@
srip67905 chr22 28455902 28455902 - L1-Ta germline . no 199 TTC28
srip68284 chr22 39308481 39308481 + L1-Ta germline . no 199 .
srip70077 chr3 17409573 17409573 - L1-Ta germline . no 199 TBC1D5
srip70349 chr3 20090517 20090517 - L1-pre-Ta germline . no 199 KAT2B
srip70806 chr3 24987874 24987874 - L1-Ta germline . no 199 .
srip71927 chr3 38626082 38626082 + L1-Ta germline . no 199 SCN5A
srip73416 chr3 59852903 59852903 + L1-Ta germline . no 199 FHIT
srip74849 chr3 82144854 82144854 - L1-Ta germline . no 199 .
srip75612 chr3 85576568 85576568 + L1-Ta germline . no 199 CADM2
srip76445 chr3 105316337 105316337 + L1-Ta germline . no 199 .
srip76622 chr3 109751770 109751770 + L1-Ta germline . no 199 .
srip76700 chr3 111275065 111275065 + L1-Ta germline . no 199 CD96
srip76748 chr3 115834578 115834578 + L1-Ta germline . no 199 LSAMP
srip77284 chr3 123590726 123590726 + L1-Ta germline . no 199 MYLK
srip78148 chr3 143121759 143121759 - L1-Ta germline . no 199 SLC9A9
srip78322 chr3 147328349 147328349 - L1-Ta germline . no 199 .
srip78607 chr3 151148544 151148544 - L1-Ta germline . no 199 MED12L
srip78851 chr3 151688088 151688088 - L1-Ta germline . no 199 .
srip79328 chr3 162717306 162717306 + L1-Ta germline . no 199 .
srip79944 chr3 172749118 172749118 - L1-Ta germline . no 199 SPATA16
srip80223 chr3 175677970 175677970 - L1-Ta germline . no 199 .
srip80403 chr3 176091333 176091333 + L1-Ta germline . no 199 .
srip81525 chr3 186372141 186372141 + L1-Ta germline . no 199 .
srip81653 chr3 187835309 187835309 - L1-Ta germline . no 199 .
srip82593 chr4 14849038 14849038 + L1-Ta germline . no 199 .
srip83257 chr4 18194357 18194357 - L1-Ta germline . no 199 .
srip83352 chr4 20246382 20246382 + L1-Ta germline . no 199 .
srip83839 chr4 29321851 29321851 + L1-Ta germline . no 199 .
srip84053 chr4 37952113 37952113 - L1-Ta germline . no 199 TBC1D1
srip84891 chr4 47007790 47007790 - L1-Ta germline . no 199 .
srip86204 chr4 66413932 66413932 + L1-Ta germline . no 199 EPHA5
srip88137 chr4 97784785 97784785 - L1-Ta germline . no 199 .
srip89998 chr4 112628973 112628973 + L1-Ta germline . no 199 .
srip92780 chr4 138177325 138177325 + L1-Ta germline . no 199 .
srip92920 chr4 146927741 146927741 - L1-Ta germline . no 199 .
srip93118 chr4 147225296 147225296 + L1-Ta germline . no 199 SLC10A7
srip93864 chr4 158907272 158907272 - L1-Ta germline . no 199 .
srip95477 chr5 1645773 1645773 + L1-Ta germline . no 199 .
srip96054 chr5 8749515 8749515 + L1-Ta germline . no 199 .
srip96365 chr5 11391276 11391276 + L1-Ta germline . no 199 CTNND2
srip96439 chr5 13231891 13231891 - L1-Ta germline . no 199 .
srip96913 chr5 21207732 21207732 + L1-Ta germline . no 199 .
srip96947 chr5 23023389 23023389 - L1-Ta germline . no 199 .
srip97964 chr5 33633348 33633348 - L1-Ta germline . no 199 ADAMTS12
srip99493 chr5 68263461 68263461 - L1-Ta germline . no 199 .
srip99766 chr5 83619783 83619783 - L1-Ta germline . no 199 EDIL3
srip100086 chr5 84239673 84239673 - L1-Ta germline . no 199 .
srip100777 chr5 89450781 89450781 + L1-Ta germline . no 199 .
srip101694 chr5 105935373 105935373 + L1-Ta germline . no 199 .
srip102261 chr5 109480258 109480258 - L1-Ta germline . no 199 .
srip103378 chr5 125040045 125040045 + L1-Ta germline . no 199 .
srip105237 chr5 155619865 155619865 + L1-Ta germline . no 199 .
srip105579 chr5 159351199 159351199 - L1-Ta germline . no 199 ADRA1B
srip107092 chr6 13191033 13191033 + L1-Ta germline . no 199 PHACTR1
srip107552 chr6 13503049 13503049 + L1-Ta germline . no 199 .
srip107613 chr6 16950834 16950834 - L1-Ta germline . no 199 .
srip107626 chr6 16950957 16950957 - L1-Ta germline . no 199 .
srip107727 chr6 19258212 19258212 + L1-Ta germline . no 199 .
srip108278 chr6 45852697 45852697 - L1-Ta germline . no 199 .
srip108670 chr6 46310291 46310291 + L1-Ta germline . no 199 .
srip109551 chr6 63368207 63368207 + L1-Ta germline . no 199 .
srip109962 chr6 68112755 68112755 - L1-Ta germline . no 199 .
srip111080 chr6 77980650 77980650 - L1-Ta germline . no 199 .
srip111215 chr6 78649689 78649689 - L1-Ta germline . no 199 .
srip111274 chr6 78749392 78749392 + L1-Ta germline . no 199 .
srip112184 chr6 91669521 91669521 - L1-Ta germline . no 199 .
srip112291 chr6 91767655 91767655 + L1-Ta germline . no 199 .
srip113019 chr6 114091140 114091140 + L1-Ta germline . no 199 LOC100652953
srip113051 chr6 115350723 115350723 + L1-Ta germline . no 199 .
srip113773 chr6 142450101 142450101 - L1-Ta germline . no 199 .
srip114444 chr6 148163587 148163587 + L1-Ta germline . no 199 .
srip114732 chr6 148195789 148195789 + L1-Ta germline . no 199 .
srip114886 chr6 154215663 154215663 + L1-Ta germline . no 199 .
srip115079 chr6 157968737 157968737 - L1-Ta germline . no 199 ZDHHC14
srip116177 chr7 8886715 8886715 + L1-Ta germline . no 199 .
srip117179 chr7 46350348 46350348 - L1-Ta germline . no 199 .
srip117488 chr7 52789472 52789472 + L1-Ta germline . no 199 .
srip117969 chr7 61778308 61778308 - L1-Ta germline . no 199 .
srip118196 chr7 62492930 62492930 + L1-Ta germline . no 199 .
srip118872 chr7 70188676 70188676 - L1-Ta germline . no 199 AUTS2
srip119862 chr7 84901724 84901724 - L1-Ta germline . no 199 .
srip120232 chr7 85044737 85044737 + L1-Ta germline . no 199 .
srip120757 chr7 93146611 93146611 - L1-Ta germline . no 199 CALCR
srip121181 chr7 107410719 107410719 - L1-Ta germline . no 199 SLC26A3
srip121792 chr7 107829263 107829263 + L1-Ta germline . no 199 NRCAM
srip121989 chr7 108325661 108325661 + L1-Ta germline . no 199 .
srip124043 chr8 4452894 4452894 - L1-Ta germline . no 199 CSMD1
srip124561 chr8 5829283 5829283 - L1-Ta germline . no 199 .
srip126923 chr8 67381885 67381885 - L1-Ta germline . no 199 .
srip127008 chr8 72013166 72013166 + L1-Ta germline . no 199 .
srip127332 chr8 72399221 72399221 - L1-Ta germline . no 199 .
srip128086 chr8 84573988 84573988 + L1-Ta germline . no 199 .
srip128243 chr8 87315040 87315040 + L1-Ta germline . no 199 .
srip128776 chr8 107557032 107557032 - L1-Ta germline . no 199 OXR1
srip129487 chr8 115881781 115881781 + L1-Ta germline . no 199 .
srip130106 chr8 131041219 131041219 + L1-Ta germline . no 199 .
srip130286 chr8 134889233 134889233 - L1-Ta germline . no 199 .
srip130353 chr8 134972242 134972242 + L1-pre-Ta germline . no 199 .
srip130730 chr9 5491418 5491418 + L1-Ta germline . no 199 .
srip131142 chr9 6290494 6290494 + L1-Ta germline . no 199 .
srip131383 chr9 7741406 7741406 + L1-Ta germline . no 199 .
srip133449 chr9 32463894 32463894 - L1-Ta germline . no 199 DDX58
srip133682 chr9 35883708 35883708 + L1-Ta germline . no 199 .
srip133955 chr9 72777411 72777411 - L1-Ta germline . no 199 LOC100507244;MAMDC2
srip134688 chr9 100675534 100675534 - L1-Ta germline . no 199 C9orf156
srip135990 chr9 118083880 118083880 - L1-Ta germline . no 199 DEC1
srip136177 chr9 138411456 138411456 + L1-Ta germline . no 199 .
srip136528 chrX 14152012 14152012 - L1-Ta germline . no 199 .
srip138338 chrX 66982754 66982754 - L1-Ta germline . no 199 .
srip140075 chrX 102363174 102363174 + L1-Ta germline . no 199 .
srip140301 chrX 111229559 111229559 - L1-Ta germline . no 199 TRPC5
srip140531 chrX 116025284 116025284 + L1-Ta germline . no 199 .
srip140741 chrX 119892831 119892831 - L1-Ta germline . no 199 .
srip141084 chrX 122664872 122664872 - L1-Ta germline . no 199 .
srip141099 chrX 123230117 123230117 - L1-Ta germline . no 199 STAG2
srip141399 chrX 129525281 129525281 - L1-Ta germline . no 199 .
srip141483 chrX 133854084 133854084 + L1-Ta germline . no 199 .
srip142173 chrX 154790189 154790189 + L1-Ta germline . no 199 TMLHE