euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

221 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1039 chr1 57711299 57711299 - unknown germline . no 452 DAB1
srip1415 chr1 67544680 67544680 + unknown germline . yes 452 .
srip2755 chr1 101978967 101978967 - unknown germline . no 452 .
srip3514 chr1 111526302 111526302 - unknown germline . no 452 .
srip4403 chr1 158238966 158238966 - unknown germline . no 452 .
srip4604 chr1 164239531 164239531 + unknown germline . no 452 .
srip4954 chr1 169524846 169524846 + unknown germline . no 452 F5
srip6163 chr1 194552979 194552979 + unknown germline . no 452 .
srip6651 chr1 220378213 220378213 - unknown germline . no 452 RAB3GAP2
srip7136 chr1 231079125 231079125 + unknown germline . no 452 TTC13
srip7512 chr1 249191481 249191481 + unknown germline . no 452 .
srip9199 chr10 66831656 66831656 - unknown germline . no 452 .
srip9426 chr10 68178116 68178116 + unknown germline . no 452 CTNNA3
srip9516 chr10 68803675 68803675 + unknown germline . no 452 LRRTM3;CTNNA3
srip9910 chr10 83111793 83111793 - unknown germline . no 452 .
srip10223 chr10 87505368 87505368 - unknown germline . no 452 GRID1
srip10409 chr10 90706777 90706777 - unknown germline . no 452 ACTA2
srip10635 chr10 92730894 92730894 - unknown germline . no 452 .
srip11011 chr10 110453451 110453451 + unknown germline . no 452 .
srip11477 chr10 122662164 122662164 + unknown germline . no 452 WDR11
srip12138 chr11 1112673 1112673 - unknown germline . no 452 .
srip13538 chr11 33670111 33670111 + unknown germline . no 452 C11orf41
srip14096 chr11 41831785 41831785 - unknown germline . no 452 .
srip15710 chr11 60364495 60364495 - unknown germline . no 452 .
srip16050 chr11 72760551 72760551 + unknown germline . no 452 FCHSD2
srip16316 chr11 79917402 79917402 + unknown germline . yes 452 .
srip16660 chr11 83750344 83750344 - unknown germline . no 452 DLG2
srip17591 chr11 104556111 104556111 - unknown germline . no 452 .
srip18832 chr11 134305626 134305626 - unknown germline . no 452 .
srip19469 chr12 5225709 5225709 + unknown germline . no 452 .
srip20042 chr12 12933660 12933660 - unknown germline . no 452 APOLD1
srip20622 chr12 28226400 28226400 - unknown germline . no 452 .
srip21456 chr12 34346159 34346159 + unknown germline . no 452 .
srip21652 chr12 34661714 34661714 + unknown germline . no 452 .
srip21827 chr12 40098756 40098756 + unknown germline . no 452 C12orf40
srip22686 chr12 47873142 47873142 + unknown germline . no 452 .
srip23617 chr12 74781462 74781462 - unknown germline . no 452 .
srip23765 chr12 77861659 77861659 - unknown germline . no 452 .
srip23895 chr12 79338008 79338008 - unknown germline . no 452 SYT1
srip24280 chr12 84955187 84955187 - unknown germline . no 452 .
srip24742 chr12 85506264 85506264 + unknown germline . no 452 LRRIQ1
srip25489 chr12 117814427 117814427 - unknown germline . no 452 .
srip25888 chr12 118186914 118186914 + unknown germline . no 452 KSR2
srip26581 chr12 127579218 127579218 + unknown germline . no 452 .
srip26816 chr13 22489779 22489779 + unknown germline . no 452 .
srip27219 chr13 27488098 27488098 + unknown germline . no 452 .
srip28305 chr13 55237995 55237995 + unknown germline . no 452 .
srip28410 chr13 58556519 58556519 + unknown germline . no 452 .
srip28560 chr13 61221130 61221130 - unknown germline . no 452 .
srip29207 chr13 61681769 61681769 - unknown germline . no 452 .
srip29349 chr13 61734471 61734471 + unknown germline . no 452 .
srip29825 chr13 65549212 65549212 - unknown germline . no 452 .
srip30098 chr13 67084854 67084854 - unknown germline . no 452 PCDH9
srip30281 chr13 72968659 72968659 + unknown germline . no 452 .
srip30823 chr13 79259770 79259770 - unknown germline . no 452 .
srip31184 chr13 83284197 83284197 + unknown germline . no 452 .
srip31325 chr13 85871588 85871588 - unknown germline . no 452 .
srip31778 chr13 86340132 86340132 - unknown germline . no 452 .
srip32633 chr13 96116756 96116756 - unknown germline . no 452 CLDN10
srip32953 chr13 97421625 97421625 + unknown germline . no 452 HS6ST3
srip33117 chr13 101391109 101391109 + unknown germline . no 452 .
srip33355 chr13 104296211 104296211 - unknown germline . no 452 .
srip33943 chr13 106623455 106623455 - unknown germline . no 452 .
srip34154 chr13 107857461 107857461 - unknown germline . no 452 FAM155A
srip34436 chr14 24992895 24992895 - unknown germline . no 452 .
srip34742 chr14 28116812 28116812 + unknown germline . no 452 LOC728755
srip34980 chr14 28301203 28301203 + unknown germline . no 452 .
srip35706 chr14 36674732 36674732 + unknown germline . no 452 .
srip36173 chr14 39875072 39875072 + unknown germline . no 452 FBXO33
srip36875 chr14 46651945 46651945 - unknown germline . no 452 .
srip37195 chr14 59160875 59160875 + unknown germline . no 452 .
srip37788 chr14 67419854 67419854 - unknown germline . no 452 GPHN
srip38243 chr14 72333675 72333675 - unknown germline . no 452 .
srip39605 chr15 35654118 35654118 - unknown germline . no 452 .
srip40052 chr15 47507319 47507319 - unknown germline . no 452 SEMA6D
srip40478 chr15 49652329 49652329 + unknown germline . no 452 C15orf33
srip41003 chr15 55129525 55129525 + unknown germline . no 452 .
srip41953 chr15 71388519 71388519 - unknown germline . no 452 .
srip43541 chr16 6793810 6793810 + unknown germline . no 452 RBFOX1
srip43749 chr16 6987037 6987037 + unknown germline . no 452 RBFOX1
srip44315 chr16 20365406 20365406 - unknown germline . no 452 .
srip44495 chr16 27425913 27425913 - unknown germline . no 452 IL21R
srip44696 chr16 32523869 32523869 + unknown germline . no 452 .
srip44941 chr16 32525600 32525600 - unknown germline . no 452 .
srip45398 chr16 33992419 33992419 + unknown germline . no 452 .
srip46156 chr16 71027998 71027998 + unknown germline . no 452 HYDIN
srip46714 chr17 11764485 11764485 + unknown germline . no 452 DNAH9
srip46939 chr17 22150203 22150203 - unknown germline . no 452 .
srip47130 chr17 28398292 28398292 + unknown germline . no 452 EFCAB5
srip48281 chr17 68357385 68357385 + unknown germline . no 452 .
srip49948 chr18 49216206 49216206 - unknown germline . no 452 .
srip52259 chr19 27793326 27793326 - unknown germline . no 452 .
srip53125 chr2 22706317 22706317 + unknown germline . no 452 .
srip53804 chr2 35879328 35879328 + unknown germline . no 452 .
srip54492 chr2 42051389 42051389 + unknown germline . no 452 .
srip55262 chr2 69168887 69168887 - unknown germline . no 452 .
srip55490 chr2 72413315 72413315 - unknown germline . no 452 EXOC6B
srip57543 chr2 126008639 126008639 + unknown germline . no 452 .
srip61489 chr2 209682250 209682250 - unknown germline . no 452 .
srip61894 chr2 221278206 221278206 - unknown germline . no 452 .
srip62045 chr2 221503739 221503739 - unknown germline . no 452 .
srip62259 chr2 230341537 230341537 + unknown germline . no 452 DNER
srip63150 chr20 9477902 9477902 - unknown germline . no 452 .
srip63587 chr20 17860913 17860913 + unknown germline . no 452 .
srip63812 chr20 21148878 21148878 - unknown germline . no 452 PLK1S1
srip63913 chr20 22501620 22501620 + unknown germline . no 452 .
srip65754 chr21 19517286 19517286 - unknown germline . no 452 .
srip66406 chr21 24060316 24060316 - unknown germline . no 452 .
srip67020 chr21 30104035 30104035 + unknown germline . no 452 .
srip68085 chr22 29007687 29007687 - unknown germline . yes 452 TTC28
srip68408 chr22 41019372 41019372 - unknown germline . no 452 MKL1
srip70252 chr3 19896236 19896236 - unknown germline . no 452 .
srip71555 chr3 36146939 36146939 - unknown germline . no 452 .
srip71781 chr3 38626054 38626054 + unknown germline . no 452 SCN5A
srip72282 chr3 55010457 55010457 + unknown germline . no 452 CACNA2D3
srip72993 chr3 59852877 59852877 + unknown germline . no 452 FHIT
srip75203 chr3 84593258 84593258 - unknown germline . no 452 .
srip75769 chr3 86264918 86264918 - unknown germline . no 452 .
srip76071 chr3 98775471 98775471 - unknown germline . no 452 .
srip77024 chr3 123590700 123590700 + unknown germline . no 452 MYLK
srip77696 chr3 134411227 134411227 - unknown germline . no 452 .
srip78009 chr3 139634686 139634686 - unknown germline . no 452 .
srip78483 chr3 151148531 151148531 - unknown germline . no 452 MED12L
srip79081 chr3 157620508 157620508 - unknown germline . no 452 .
srip80001 chr3 173917195 173917195 - unknown germline . no 452 NLGN1
srip80594 chr3 180877922 180877922 + unknown germline . no 452 .
srip81289 chr3 186372113 186372113 + unknown germline . no 452 .
srip81947 chr3 193354152 193354152 - unknown germline . no 452 OPA1
srip82893 chr4 18162627 18162627 - unknown germline . no 452 .
srip83165 chr4 18194332 18194332 - unknown germline . no 452 .
srip83473 chr4 22909082 22909082 - unknown germline . no 452 .
srip84200 chr4 42984135 42984135 + unknown germline . no 452 GRXCR1
srip84428 chr4 45890702 45890702 - unknown germline . no 452 .
srip85225 chr4 56713958 56713958 - unknown germline . no 452 .
srip86275 chr4 66809039 66809039 - unknown germline . no 452 .
srip86521 chr4 68282406 68282406 - unknown germline . no 452 .
srip87279 chr4 80768521 80768521 + unknown germline . no 452 GDEP
srip87590 chr4 81242092 81242092 - unknown germline . no 452 .
srip87793 chr4 85317446 85317446 - unknown germline . no 452 .
srip87997 chr4 88461091 88461091 - unknown germline . no 452 .
srip88251 chr4 98560434 98560434 - unknown germline . no 452 C4orf37
srip88549 chr4 103043669 103043669 - unknown germline . no 452 .
srip88747 chr4 103343731 103343731 + unknown germline . no 452 .
srip89156 chr4 104930177 104930177 + unknown germline . no 452 .
srip89395 chr4 107862156 107862156 - unknown germline . no 452 DKK2
srip90597 chr4 118332385 118332385 - unknown germline . no 452 .
srip91006 chr4 125208813 125208813 + unknown germline . no 452 .
srip91765 chr4 132357338 132357338 + unknown germline . no 452 .
srip93573 chr4 153061908 153061908 - unknown germline . no 452 .
srip94833 chr4 177308485 177308485 - unknown germline . no 452 .
srip95017 chr4 181481032 181481032 - unknown germline . no 452 .
srip95613 chr5 4621424 4621424 - unknown germline . no 452 .
srip96627 chr5 15913061 15913061 + unknown germline . no 452 FBXL7
srip97499 chr5 33633321 33633321 - unknown germline . no 452 ADAMTS12
srip98011 chr5 33797529 33797529 - unknown germline . no 452 ADAMTS12
srip98474 chr5 44139101 44139101 - unknown germline . no 452 .
srip98973 chr5 52575618 52575618 + unknown germline . no 452 .
srip100315 chr5 89450757 89450757 + unknown germline . no 452 .
srip100935 chr5 96866396 96866396 + unknown germline . no 452 .
srip101173 chr5 96952628 96952628 - unknown germline . no 452 .
srip101333 chr5 99234391 99234391 - unknown germline . no 452 .
srip101856 chr5 108777423 108777423 - unknown germline . no 452 .
srip102117 chr5 109480243 109480243 - unknown germline . no 452 .
srip102444 chr5 109567514 109567514 + unknown germline . no 452 .
srip103126 chr5 125012524 125012524 - unknown germline . no 452 .
srip103254 chr5 125040034 125040034 + unknown germline . no 452 .
srip103701 chr5 137014764 137014764 - unknown germline . no 452 KLHL3
srip104093 chr5 144330983 144330983 - unknown germline . no 452 .
srip104484 chr5 147338105 147338105 - unknown germline . yes 452 .
srip104731 chr5 152982343 152982343 - unknown germline . no 452 GRIA1
srip105062 chr5 155619852 155619852 + unknown germline . no 452 .
srip106247 chr5 177401287 177401287 + unknown germline . no 452 .
srip106493 chr5 180329628 180329628 + unknown germline . no 452 BTNL8
srip107248 chr6 13503024 13503024 + unknown germline . no 452 .
srip108918 chr6 56729287 56729287 - unknown germline . no 452 LOC100652827
srip109704 chr6 65105560 65105560 - unknown germline . no 452 EYS
srip110235 chr6 73089780 73089780 + unknown germline . no 452 RIMS1
srip110801 chr6 77980628 77980628 - unknown germline . no 452 .
srip111580 chr6 89122014 89122014 - unknown germline . no 452 .
srip112229 chr6 91767629 91767629 + unknown germline . no 452 .
srip114550 chr6 148195781 148195781 + unknown germline . no 452 .
srip115931 chr6 163113050 163113050 - unknown germline . no 452 PARK2
srip116394 chr7 20170322 20170322 + unknown germline . no 452 .
srip116582 chr7 26794895 26794895 + unknown germline . no 452 SKAP2
srip116897 chr7 41435705 41435705 - unknown germline . no 452 .
srip116977 chr7 42529852 42529852 - unknown germline . no 452 .
srip117326 chr7 52789428 52789428 + unknown germline . no 452 .
srip118413 chr7 66591159 66591159 - unknown germline . no 452 TYW1
srip119086 chr7 76919295 76919295 + unknown germline . no 452 CCDC146
srip119323 chr7 82030907 82030907 - unknown germline . no 452 CACNA2D1
srip119557 chr7 84901705 84901705 - unknown germline . no 452 .
srip120871 chr7 94766720 94766720 + unknown germline . no 452 PPP1R9A
srip121111 chr7 105967850 105967850 + unknown germline . no 452 .
srip121327 chr7 107829239 107829239 + unknown germline . no 452 NRCAM
srip121871 chr7 108325645 108325645 + unknown germline . no 452 .
srip123271 chr7 142818636 142818636 + unknown germline . no 452 .
srip125349 chr8 24926529 24926529 - unknown germline . no 452 .
srip126239 chr8 56620569 56620569 - unknown germline . no 452 .
srip127508 chr8 75723709 75723709 + unknown germline . no 452 .
srip127785 chr8 83640785 83640785 + unknown germline . no 452 .
srip129903 chr8 127744231 127744231 - unknown germline . no 452 .
srip130051 chr8 131041209 131041209 + unknown germline . no 452 .
srip130866 chr9 6290459 6290459 + unknown germline . no 452 .
srip131799 chr9 20063550 20063550 - unknown germline . no 452 .
srip132321 chr9 30495867 30495867 - unknown germline . no 452 .
srip132474 chr9 30674437 30674437 - unknown germline . no 452 .
srip132697 chr9 31748212 31748212 + unknown germline . no 452 .
srip134027 chr9 74904890 74904890 - unknown germline . no 452 .
srip135792 chr9 118083818 118083818 - unknown germline . no 452 DEC1
srip136253 chrX 4659582 4659582 - unknown germline . no 452 .
srip136304 chrX 11628363 11628363 - unknown germline . no 452 ARHGAP6
srip136444 chrX 14151990 14151990 - unknown germline . no 452 .
srip136917 chrX 34942070 34942070 - unknown germline . no 452 .
srip137436 chrX 55585135 55585135 - unknown germline . no 452 .
srip137729 chrX 58482468 58482468 - unknown germline . no 452 .
srip138194 chrX 63516573 63516573 + unknown germline . no 452 MTMR8
srip138909 chrX 75949527 75949527 - unknown germline . no 452 .
srip139672 chrX 98264276 98264276 - unknown germline . no 452 .
srip140963 chrX 120962306 120962306 - unknown germline . no 452 .
srip141184 chrX 124637120 124637120 - unknown germline . no 452 .
srip141895 chrX 140515246 140515246 - unknown germline . no 452 .