euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

211 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip86 chr1 17229479 17229479 - L1-Ta germline . no 179 .
srip506 chr1 42483961 42483961 + L1-Ta germline . no 179 HIVEP3
srip840 chr1 56405398 56405398 - L1-Ta germline . no 179 LOC100507652
srip1594 chr1 71248609 71248609 + L1-Ta germline . no 179 .
srip1988 chr1 81855783 81855783 + L1-Ta germline . no 179 .
srip3887 chr1 119553352 119553352 + L1-Ta germline . no 179 .
srip3925 chr1 121354774 121354774 + L1-Ta germline . no 179 .
srip4027 chr1 149216797 149216797 + L1-Ta germline . no 179 .
srip4174 chr1 152443898 152443898 - L1-Ta germline validated no 179 .
srip4737 chr1 165553136 165553136 - L1-Ta germline . no 179 .
srip5026 chr1 169524859 169524859 + L1-Ta germline . no 179 F5
srip5404 chr1 179575362 179575362 - L1-Ta germline . no 179 TDRD5
srip5543 chr1 183969672 183969672 - L1-Ta germline . no 179 GLT25D2
srip5798 chr1 190973018 190973018 - L1-Ta germline . no 179 .
srip6352 chr1 207579511 207579511 + L1-Ta germline . no 179 .
srip7398 chr1 242311577 242311577 + L1-Ta germline validated no 179 PLD5
srip7449 chr1 248454039 248454039 - L1-pre-Ta germline . no 179 .
srip8409 chr10 25707687 25707687 - L1-Ta germline . no 179 GPR158
srip8640 chr10 27775762 27775762 + L1-Ta germline . no 179 .
srip9671 chr10 74767506 74767506 - L1-Ta germline . no 179 P4HA1
srip10581 chr10 91717634 91717634 - L1-Ta germline . no 179 .
srip11196 chr10 110453470 110453470 + L1-Ta germline . no 179 .
srip11383 chr10 117320227 117320227 - L1-Ta germline . no 179 ATRNL1
srip11850 chr10 124455231 124455231 + L1-Ta germline . no 179 .
srip12319 chr11 10042438 10042438 - L1-Ta germline . no 179 SBF2
srip13241 chr11 29874260 29874260 - L1-Ta germline . no 179 .
srip13778 chr11 33670123 33670123 + L1-Ta germline . no 179 C11orf41
srip14347 chr11 41831811 41831811 - L1-Ta germline . no 179 .
srip14745 chr11 48360753 48360753 - L1-Ta germline . no 179 .
srip17755 chr11 104556130 104556130 - L1-Ta germline . no 179 .
srip18035 chr11 110377879 110377879 - L1-Ta germline . no 179 .
srip18515 chr11 123241794 123241794 + L1-Ta germline . no 179 .
srip18598 chr11 128367821 128367821 - L1-Ta germline . no 179 ETS1
srip19303 chr11 134305648 134305648 - L1-Ta germline . no 179 .
srip20705 chr12 28226413 28226413 - L1-Ta germline . no 179 .
srip22245 chr12 43256986 43256986 - L1-Ta germline . no 179 .
srip25118 chr12 95808527 95808527 - L1-Ta germline . no 179 .
srip25991 chr12 118186926 118186926 + L1-Ta germline . no 179 KSR2
srip27475 chr13 27488126 27488126 + L1-Ta germline . no 179 .
srip27856 chr13 38742108 38742108 + L1-Ta germline . no 179 .
srip28239 chr13 49521713 49521713 + L1-Ta germline . no 179 .
srip28328 chr13 55238031 55238031 + L1-Ta germline . no 179 .
srip28335 chr13 57221666 57221666 - L1-Ta germline . no 179 .
srip29036 chr13 61462336 61462336 - L1-Ta germline . no 179 .
srip29609 chr13 61734485 61734485 + L1-Ta germline . no 179 .
srip29752 chr13 64569855 64569855 - L1-Ta germline . no 179 .
srip30385 chr13 72968682 72968682 + L1-Ta germline . no 179 .
srip31006 chr13 79259793 79259793 - L1-Ta germline . no 179 .
srip31414 chr13 85871602 85871602 - L1-Ta germline . no 179 .
srip32004 chr13 86340153 86340153 - L1-Ta germline . no 179 .
srip33481 chr13 104296223 104296223 - L1-Ta germline . no 179 .
srip33638 chr13 104395943 104395943 - L1-Ta germline . no 179 .
srip33780 chr13 105280146 105280146 - L1-Ta germline . no 179 .
srip34273 chr14 19000969 19000969 + L1-Ta germline . no 179 .
srip34589 chr14 26787480 26787480 - L1-Ta germline . no 179 .
srip36070 chr14 37769602 37769602 - L1-Ta germline . no 179 MIPOL1
srip37047 chr14 49621405 49621405 + L1-Ta germline . no 179 .
srip37138 chr14 52667758 52667758 - L1-Ta germline . no 179 .
srip37602 chr14 60669254 60669254 - L1-Ta germline . no 179 .
srip37646 chr14 63348479 63348479 + L1-Ta germline . no 179 KCNH5
srip37847 chr14 67419863 67419863 - L1-Ta germline . no 179 GPHN
srip38148 chr14 71197799 71197799 + L1-Ta germline . no 179 MAP3K9
srip38601 chr14 86381796 86381796 - L1-Ta germline . no 179 .
srip38950 chr14 107038564 107038564 + L1-Ta germline . no 179 IGH@
srip39326 chr15 28175791 28175791 - L1-Ta germline . no 179 OCA2
srip39502 chr15 34031839 34031839 - L1-Ta germline . no 179 RYR3
srip40204 chr15 47507329 47507329 - L1-Ta germline . no 179 SEMA6D
srip41693 chr15 62064901 62064901 + L1-Ta germline . no 179 .
srip41716 chr15 62169638 62169638 - L1-Ta germline . no 179 VPS13C
srip43387 chr15 100931161 100931161 - L1-Ta germline . no 179 .
srip44763 chr16 32523893 32523893 - L1-Ta germline . no 179 .
srip45043 chr16 32525611 32525611 - L1-Ta germline . no 179 .
srip45469 chr16 33992430 33992430 + L1-Ta germline . no 179 .
srip45858 chr16 61079188 61079188 + L1-Ta germline . no 179 .
srip47750 chr17 33135413 33135413 - L1-Ta germline . no 179 .
srip47886 chr17 34272148 34272148 + L1-Ta germline . no 179 .
srip47898 chr17 34272169 34272169 + L1-Ta germline . no 179 .
srip48889 chr18 12491262 12491262 + L1-Ta germline . no 179 SPIRE1
srip49071 chr18 25935379 25935379 - L1-Ta germline . no 179 .
srip49997 chr18 49216219 49216219 - L1-Ta germline . no 179 .
srip50707 chr18 51762730 51762730 - L1-Ta germline . no 179 .
srip51001 chr18 59579975 59579975 + L1-Ta germline . no 179 .
srip51178 chr18 62947200 62947200 - L1-Ta germline . no 179 .
srip51669 chr18 74515287 74515287 - L1-Ta germline . no 179 LOC100131655
srip51813 chr18 74960068 74960068 - L1-Ta germline . no 179 .
srip52441 chr19 45444699 45444699 + L1-Ta germline . no 179 .
srip53423 chr2 23191000 23191000 - L1-Ta germline . no 179 .
srip53942 chr2 35879359 35879359 + L1-Ta germline . no 179 .
srip54100 chr2 36381238 36381238 + L1-Ta germline . no 179 .
srip56234 chr2 82098043 82098043 + L1-Ta germline . no 179 .
srip56610 chr2 92291306 92291306 - L1-Ta germline . no 179 .
srip57802 chr2 132868182 132868182 - L1-Ta germline . no 179 .
srip60547 chr2 181155237 181155237 - L1-Ta germline . no 179 .
srip60798 chr2 191478714 191478714 - L1-Ta germline . no 179 .
srip60856 chr2 192009356 192009356 + L1-Ta germline . no 179 STAT4
srip62166 chr2 221503768 221503768 - L1-Ta germline . no 179 .
srip63189 chr20 9477925 9477925 - L1-Ta germline . no 179 .
srip63440 chr20 16479495 16479495 - L1-Ta germline . no 179 KIF16B
srip65179 chr20 52063224 52063224 + L1-Ta germline . no 179 TSHZ2
srip66855 chr21 29069171 29069171 + L1-Ta germline . no 179 .
srip67437 chr22 22486369 22486369 - L1-Ta germline . no 179 IGL@
srip67826 chr22 22715588 22715588 + L1-Ta germline . no 179 IGL@
srip69627 chr3 656435 656435 - L1-Ta germline . no 179 .
srip70057 chr3 17409573 17409573 - L1-Ta germline . no 179 TBC1D5
srip70798 chr3 24987874 24987874 - L1-Ta germline . no 179 .
srip71686 chr3 38253607 38253607 - L1-Ta germline . no 179 OXSR1
srip71915 chr3 38626082 38626082 + L1-Ta germline . no 179 SCN5A
srip72738 chr3 55788580 55788580 + L1-Ta germline . no 179 ERC2
srip73400 chr3 59852903 59852903 + L1-Ta germline . no 179 FHIT
srip73773 chr3 75101216 75101216 + L1-Ta germline . no 179 .
srip74422 chr3 80590163 80590163 - L1-Ta germline . no 179 .
srip74704 chr3 81990993 81990993 - L1-Ta germline . no 179 .
srip75602 chr3 85576568 85576568 + L1-Ta germline . no 179 CADM2
srip76432 chr3 105316337 105316337 + L1-Ta germline . no 179 .
srip76692 chr3 111275065 111275065 + L1-Ta germline . no 179 CD96
srip76805 chr3 119046413 119046413 + L1-Ta germline . no 179 ARHGAP31
srip78141 chr3 143121759 143121759 - L1-Ta germline . no 179 SLC9A9
srip78296 chr3 144879645 144879645 - L1-Ta germline . no 179 .
srip78587 chr3 151148544 151148544 - L1-Ta germline . no 179 MED12L
srip79317 chr3 162717306 162717306 + L1-Ta germline . no 179 .
srip79879 chr3 169269964 169269964 + L1-Ta germline . no 179 MECOM
srip80383 chr3 176091333 176091333 + L1-Ta germline . no 179 .
srip80445 chr3 180091672 180091672 + L1-Ta germline . no 179 .
srip81508 chr3 186372141 186372141 + L1-Ta germline . no 179 .
srip81633 chr3 187835309 187835309 - L1-Ta germline . no 179 .
srip83332 chr4 20246382 20246382 + L1-Ta germline . no 179 .
srip84873 chr4 47007790 47007790 - L1-Ta germline . no 179 .
srip85821 chr4 58917529 58917529 - L1-Ta germline . no 179 .
srip86978 chr4 71093301 71093301 + L1-Ta germline . no 179 C4orf7
srip87829 chr4 85317475 85317475 - L1-Ta germline . no 179 .
srip89984 chr4 112628973 112628973 + L1-Ta germline . no 179 .
srip90286 chr4 115132695 115132695 + L1-Ta germline . no 179 .
srip91084 chr4 125230273 125230273 + L1-Ta germline . no 179 .
srip91300 chr4 130601435 130601435 - L1-Ta germline . no 179 .
srip92213 chr4 134596423 134596423 + L1-Ta germline . no 179 .
srip92762 chr4 138177325 138177325 + L1-Ta germline . no 179 .
srip92890 chr4 140647779 140647779 - L1-Ta germline . no 179 MGST2;MAML3
srip94033 chr4 165231730 165231730 - L1-Ta germline . no 179 MARCH1
srip96044 chr5 8749515 8749515 + L1-Ta germline . no 179 .
srip96785 chr5 16883042 16883042 - L1-Ta germline . no 179 MYO10
srip96903 chr5 21207732 21207732 + L1-Ta germline . no 179 .
srip97216 chr5 26093140 26093140 + L1-Ta germline . no 179 .
srip97944 chr5 33633348 33633348 - L1-Ta germline . no 179 ADAMTS12
srip98353 chr5 41602028 41602028 + L1-Ta germline . no 179 .
srip98592 chr5 46396964 46396964 + L1-Ta germline . no 179 .
srip99107 chr5 57279517 57279517 + L1-Ta germline . no 179 .
srip100757 chr5 89450781 89450781 + L1-Ta germline . no 179 .
srip101056 chr5 96866407 96866407 + L1-Ta germline . no 179 .
srip102243 chr5 109480258 109480258 - L1-Ta germline . no 179 .
srip103758 chr5 137014775 137014775 - L1-Ta germline . no 179 KLHL3
srip104222 chr5 144331013 144331013 - L1-Ta germline . no 179 .
srip104831 chr5 154873933 154873933 - L1-Ta germline . no 179 .
srip105221 chr5 155619865 155619865 + L1-Ta germline . no 179 .
srip105567 chr5 159351199 159351199 - L1-Ta germline . no 179 ADRA1B
srip107538 chr6 13503049 13503049 + L1-Ta germline . no 179 .
srip107921 chr6 32358915 32358915 + L1-Ta germline . no 179 .
srip107942 chr6 32457289 32457289 + L1-Ta germline . no 179 .
srip108009 chr6 32509106 32509106 - L1-Ta germline . no 179 .
srip108099 chr6 32638838 32638838 - L1-Ta germline . no 179 .
srip108263 chr6 45852697 45852697 - L1-Ta germline . no 179 .
srip108660 chr6 46310291 46310291 + L1-Ta germline . no 179 .
srip109942 chr6 68112755 68112755 - L1-Ta germline . no 179 .
srip111066 chr6 77980650 77980650 - L1-Ta germline . no 179 .
srip111297 chr6 81293578 81293578 - L1-Ta germline . no 179 .
srip112170 chr6 91669521 91669521 - L1-Ta germline . no 179 .
srip112794 chr6 102846086 102846086 - L1-Ta germline . no 179 .
srip113337 chr6 123853938 123853938 - L1-Ta germline . no 179 TRDN
srip113758 chr6 142450101 142450101 - L1-Ta germline . no 179 .
srip114722 chr6 148195789 148195789 + L1-Ta germline . no 179 .
srip114866 chr6 154215663 154215663 + L1-Ta germline . no 179 .
srip115063 chr6 157968737 157968737 - L1-Ta germline . no 179 ZDHHC14
srip115548 chr6 162181257 162181257 + L1-Ta germline . no 179 PARK2
srip116171 chr7 8886715 8886715 + L1-Ta germline . no 179 .
srip116370 chr7 17094714 17094714 + L1-Ta germline . no 179 .
srip117472 chr7 52789472 52789472 + L1-Ta germline . no 179 .
srip117953 chr7 61778308 61778308 - L1-Ta germline . no 179 .
srip118176 chr7 62492930 62492930 + L1-Ta germline . no 179 .
srip118868 chr7 70188676 70188676 - L1-Ta germline . no 179 AUTS2
srip119844 chr7 84901724 84901724 - L1-Ta germline . no 179 .
srip120216 chr7 85044737 85044737 + L1-Ta germline . no 179 .
srip121174 chr7 107410719 107410719 - L1-Ta germline . no 179 SLC26A3
srip121776 chr7 107829263 107829263 + L1-Ta germline . no 179 NRCAM
srip122241 chr7 110484749 110484749 + L1-Ta germline . no 179 IMMP2L
srip122636 chr7 122124545 122124545 + L1-Ta germline . no 179 CADPS2
srip124031 chr8 4452894 4452894 - L1-Ta germline . no 179 CSMD1
srip124543 chr8 5829283 5829283 - L1-Ta germline . no 179 .
srip125409 chr8 24926545 24926545 - L1-Ta germline . no 179 .
srip126605 chr8 66276841 66276841 + L1-Ta germline . no 179 .
srip126905 chr8 67381885 67381885 - L1-Ta germline . no 179 .
srip128227 chr8 87315040 87315040 + L1-Ta germline . no 179 .
srip128714 chr8 100661127 100661127 - L1-Ta germline . no 179 VPS13B
srip128758 chr8 107557032 107557032 - L1-Ta germline . no 179 OXR1
srip130096 chr8 131041219 131041219 + L1-Ta germline . no 179 .
srip131124 chr9 6290494 6290494 + L1-Ta germline . no 179 .
srip131538 chr9 9236600 9236600 + L1-Ta germline . no 179 PTPRD
srip132616 chr9 30674468 30674468 - L1-Ta germline . no 179 .
srip133429 chr9 32463894 32463894 - L1-Ta germline . no 179 DDX58
srip133662 chr9 35883708 35883708 + L1-Ta germline . no 179 .
srip133950 chr9 72777411 72777411 - L1-Ta germline . no 179 LOC100507244;MAMDC2
srip136046 chr9 121763133 121763133 - L1-Ta germline . no 179 .
srip136153 chr9 136105857 136105857 - L1-Ta germline . no 179 .
srip136769 chrX 24384651 24384651 - L1-Ta germline . no 179 .
srip136940 chrX 43630877 43630877 - L1-Ta germline . no 179 MAOB
srip137336 chrX 55264652 55264652 - L1-Ta germline . no 179 .
srip137582 chrX 55585160 55585160 - L1-Ta germline . no 179 .
srip138329 chrX 66982754 66982754 - L1-Ta germline . no 179 .
srip139130 chrX 79237289 79237289 + L1-Ta germline . no 179 .
srip140735 chrX 119892831 119892831 - L1-Ta germline . no 179 .
srip141468 chrX 130495439 130495439 - L1-Ta germline . no 179 .
srip141956 chrX 140515258 140515258 - L1-Ta germline . no 179 .
srip142211 chrY 9951878 9951878 - L1-pre-Ta germline . no 179 .