euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

244 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip277 chr1 35183331 35183331 - unknown germline . no 464 .
srip1048 chr1 57711299 57711299 - unknown germline . no 464 DAB1
srip1426 chr1 67544680 67544680 + unknown germline . yes 464 .
srip1761 chr1 75192881 75192881 - unknown germline . no 464 CRYZ
srip2759 chr1 101978967 101978967 - unknown germline . no 464 .
srip3382 chr1 111295490 111295490 - unknown germline . no 464 .
srip3522 chr1 111526302 111526302 - unknown germline . no 464 .
srip3661 chr1 116980795 116980795 . unknown germline validated no 464 .
srip3811 chr1 119553342 119553342 + unknown germline . no 464 .
srip4410 chr1 158238966 158238966 - unknown germline . no 464 .
srip5349 chr1 179575350 179575350 - unknown germline . no 464 TDRD5
srip6173 chr1 194934510 194934510 . unknown germline validated no 464 .
srip6662 chr1 220378213 220378213 - unknown germline . no 464 RAB3GAP2
srip7140 chr1 231079125 231079125 + unknown germline . no 464 TTC13
srip7304 chr1 242311549 242311549 + unknown germline . no 464 PLD5
srip8020 chr10 19216829 19216829 . unknown germline validated no 464 .
srip8316 chr10 25707676 25707676 - unknown germline . no 464 GPR158
srip9204 chr10 66831656 66831656 - unknown germline . no 464 .
srip9489 chr10 68178270 68178270 . unknown germline validated no 464 CTNNA3
srip10235 chr10 87505368 87505368 - unknown germline . no 464 GRID1
srip10415 chr10 90706777 90706777 - unknown germline . no 464 ACTA2
srip11021 chr10 110453451 110453451 + unknown germline . no 464 .
srip11704 chr10 124455206 124455206 + unknown germline . no 464 .
srip12143 chr11 1112673 1112673 - unknown germline . no 464 .
srip13320 chr11 31059553 31059553 - unknown germline . no 464 LOC100508736
srip13550 chr11 33670111 33670111 + unknown germline . no 464 C11orf41
srip13989 chr11 40841314 40841314 . unknown germline validated no 464 .
srip14575 chr11 48360520 48360520 . unknown germline validated no 464 .
srip14692 chr11 48360720 48360720 - unknown germline . no 464 .
srip15721 chr11 60364495 60364495 - unknown germline . no 464 .
srip16061 chr11 72760551 72760551 + unknown germline . no 464 FCHSD2
srip16327 chr11 79917402 79917402 + unknown germline . yes 464 .
srip16506 chr11 83652337 83652337 - unknown germline . no 464 DLG2
srip16993 chr11 94684350 94684350 + unknown germline . no 464 .
srip17933 chr11 110377868 110377868 - unknown germline . no 464 .
srip18842 chr11 134305626 134305626 - unknown germline . no 464 .
srip20045 chr12 12933660 12933660 - unknown germline . no 464 APOLD1
srip20940 chr12 33325774 33325774 - unknown germline . no 464 .
srip21269 chr12 34276519 34276519 - unknown germline . no 464 .
srip21465 chr12 34346159 34346159 + unknown germline . no 464 .
srip21660 chr12 34661714 34661714 + unknown germline . no 464 .
srip22396 chr12 43390122 43390122 - unknown germline . no 464 .
srip22698 chr12 47873142 47873142 + unknown germline . no 464 .
srip23086 chr12 63837601 63837601 - unknown germline . no 464 .
srip23279 chr12 66978550 66978550 + unknown germline . no 464 GRIP1
srip23624 chr12 74781462 74781462 - unknown germline . no 464 .
srip24201 chr12 84955046 84955046 . unknown germline validated no 464 .
srip25755 chr12 118057334 118057334 - unknown germline . no 464 KSR2
srip26221 chr12 126802915 126802915 - unknown germline . no 464 .
srip26712 chr13 21514864 21514864 . unknown germline validated no 464 .
srip27228 chr13 27488098 27488098 + unknown germline . no 464 .
srip28126 chr13 48266680 48266680 + unknown germline . no 464 .
srip28562 chr13 61221130 61221130 - unknown germline . no 464 .
srip28846 chr13 61462321 61462321 - unknown germline . no 464 .
srip29890 chr13 65766444 65766444 - unknown germline . no 464 .
srip30107 chr13 67084854 67084854 - unknown germline . no 464 PCDH9
srip30650 chr13 79259466 79259466 . unknown germline validated no 464 .
srip30834 chr13 79259770 79259770 - unknown germline . no 464 .
srip31335 chr13 85871588 85871588 - unknown germline . no 464 .
srip32342 chr13 91626208 91626208 + unknown germline . no 464 .
srip32641 chr13 96116756 96116756 - unknown germline . no 464 CLDN10
srip32961 chr13 97421625 97421625 + unknown germline . no 464 HS6ST3
srip33181 chr13 104296038 104296038 . unknown germline validated no 464 .
srip33953 chr13 106623455 106623455 - unknown germline . no 464 .
srip34753 chr14 28116812 28116812 + unknown germline . no 464 LOC728755
srip35551 chr14 34140114 34140114 - unknown germline . no 464 NPAS3
srip35711 chr14 36674732 36674732 + unknown germline . no 464 .
srip36679 chr14 43197213 43197213 + unknown germline . no 464 .
srip37510 chr14 60617378 60617378 - unknown germline . no 464 DHRS7
srip39950 chr15 47507123 47507123 . unknown germline validated no 464 SEMA6D
srip40059 chr15 47507319 47507319 - unknown germline . no 464 SEMA6D
srip40488 chr15 49652329 49652329 + unknown germline . no 464 C15orf33
srip41024 chr15 55129703 55129703 . unknown germline validated no 464 .
srip41440 chr15 59794476 59794476 - unknown germline . no 464 FAM81A
srip41562 chr15 61328948 61328948 - unknown germline . no 464 RORA
srip41962 chr15 71388519 71388519 - unknown germline . no 464 .
srip42164 chr15 72085476 72085476 + unknown germline . no 464 .
srip42391 chr15 83551609 83551609 - unknown germline . no 464 HOMER2
srip42574 chr15 84715865 84715865 + unknown germline . no 464 .
srip42739 chr15 98046018 98046018 + unknown germline . no 464 .
srip42879 chr15 98051276 98051276 + unknown germline . no 464 .
srip43756 chr16 6987037 6987037 + unknown germline . no 464 RBFOX1
srip43957 chr16 8542726 8542726 - unknown germline . no 464 .
srip44323 chr16 20365406 20365406 - unknown germline . no 464 .
srip46168 chr16 71027998 71027998 + unknown germline . no 464 HYDIN
srip46724 chr17 11764485 11764485 + unknown germline . no 464 DNAH9
srip47139 chr17 28398292 28398292 + unknown germline . no 464 EFCAB5
srip49075 chr18 27218953 27218953 . unknown germline validated no 464 .
srip49952 chr18 49216206 49216206 - unknown germline . no 464 .
srip50541 chr18 51762718 51762718 - unknown germline . no 464 .
srip51761 chr18 74960050 74960050 - unknown germline . no 464 .
srip52067 chr19 22500496 22500496 - unknown germline . no 464 .
srip52697 chr2 6798261 6798261 - unknown germline . no 464 .
srip53011 chr2 13631539 13631539 - unknown germline . no 464 .
srip54175 chr2 36570229 36570229 - unknown germline . no 464 .
srip54831 chr2 51655388 51655388 + unknown germline . no 464 .
srip55501 chr2 72413315 72413315 - unknown germline . no 464 EXOC6B
srip56385 chr2 83188313 83188313 + unknown germline . no 464 .
srip56829 chr2 106163144 106163144 + unknown germline . no 464 .
srip57168 chr2 108901173 108901173 - unknown germline . no 464 .
srip57473 chr2 123731773 123731773 + unknown germline . no 464 .
srip58083 chr2 141852873 141852873 - unknown germline . no 464 LRP1B
srip58852 chr2 147020911 147020911 + unknown germline . no 464 .
srip59249 chr2 149814373 149814373 . unknown germline validated no 464 KIF5C
srip59751 chr2 168735497 168735497 - unknown germline . no 464 .
srip60300 chr2 179357273 179357273 + unknown germline . no 464 PLEKHA3
srip60614 chr2 182473910 182473910 + unknown germline . no 464 CERKL
srip60984 chr2 198499515 198499515 + unknown germline . no 464 RFTN2
srip61083 chr2 199779883 199779883 + unknown germline . no 464 .
srip61185 chr2 201638057 201638057 + unknown germline . no 464 AOX2P
srip61495 chr2 209682250 209682250 - unknown germline . no 464 .
srip61897 chr2 221278206 221278206 - unknown germline . no 464 .
srip62050 chr2 221503739 221503739 - unknown germline . no 464 .
srip62261 chr2 230341537 230341537 + unknown germline . no 464 DNER
srip63408 chr20 16479480 16479480 - unknown germline . no 464 KIF16B
srip63822 chr20 21148878 21148878 - unknown germline . no 464 PLK1S1
srip64288 chr20 29638560 29638560 + unknown germline . no 464 .
srip64509 chr20 29638592 29638592 . unknown germline validated no 464 .
srip64694 chr20 41952086 41952086 - unknown germline . no 464 .
srip65051 chr20 44157049 44157049 - unknown germline . no 464 .
srip65376 chr21 10749944 10749944 + unknown germline . no 464 .
srip65763 chr21 19517286 19517286 - unknown germline . no 464 .
srip66722 chr21 29069160 29069160 + unknown germline . no 464 .
srip67026 chr21 30104035 30104035 + unknown germline . no 464 .
srip67191 chr22 19210889 19210889 + unknown germline . no 464 CLTCL1
srip68096 chr22 29007687 29007687 - unknown germline . yes 464 TTC28
srip68416 chr22 41019372 41019372 - unknown germline . no 464 MKL1
srip68541 chr22 42244162 42244162 - unknown germline . no 464 SREBF2
srip68661 chr22 44324578 44324578 - unknown germline . no 464 PNPLA3
srip70261 chr3 19896236 19896236 - unknown germline . no 464 .
srip71244 chr3 27239558 27239558 - unknown germline . no 464 .
srip72288 chr3 55010457 55010457 + unknown germline . no 464 CACNA2D3
srip73001 chr3 59852877 59852877 + unknown germline . no 464 FHIT
srip74202 chr3 79660944 79660944 + unknown germline . no 464 ROBO1
srip74367 chr3 80590146 80590146 - unknown germline . no 464 .
srip74728 chr3 82144632 82144632 . unknown germline validated no 464 .
srip74958 chr3 83613993 83613993 . unknown germline validated no 464 .
srip75211 chr3 84593258 84593258 - unknown germline . no 464 .
srip75638 chr3 85663290 85663290 . unknown germline validated no 464 CADM2
srip76304 chr3 101936459 101936459 + unknown germline . no 464 .
srip77029 chr3 123590700 123590700 + unknown germline . no 464 MYLK
srip78018 chr3 139634686 139634686 - unknown germline . no 464 .
srip78359 chr3 151148342 151148342 . unknown germline validated no 464 MED12L
srip78488 chr3 151148531 151148531 - unknown germline . no 464 MED12L
srip79092 chr3 157620508 157620508 - unknown germline . no 464 .
srip79587 chr3 166764464 166764464 - unknown germline . no 464 .
srip80604 chr3 180877922 180877922 + unknown germline . no 464 .
srip81298 chr3 186372113 186372113 + unknown germline . no 464 .
srip82272 chr4 5667970 5667970 - unknown germline . no 464 EVC2
srip82900 chr4 18162627 18162627 - unknown germline . no 464 .
srip84211 chr4 42984135 42984135 + unknown germline . no 464 GRXCR1
srip84437 chr4 45890702 45890702 - unknown germline . no 464 .
srip85136 chr4 53628555 53628555 . unknown germline validated no 464 .
srip85715 chr4 58917503 58917503 - unknown germline . no 464 .
srip85970 chr4 60979517 60979517 - unknown germline . no 464 .
srip86529 chr4 68282406 68282406 - unknown germline . no 464 .
srip86766 chr4 69612552 69612552 - unknown germline . no 464 .
srip86907 chr4 71093285 71093285 + unknown germline . no 464 C4orf7
srip87595 chr4 81242092 81242092 - unknown germline . no 464 .
srip88561 chr4 103043669 103043669 - unknown germline . no 464 .
srip89164 chr4 104930177 104930177 + unknown germline . no 464 .
srip90007 chr4 112629127 112629127 . unknown germline validated no 464 .
srip90377 chr4 116659841 116659841 . unknown germline validated no 464 .
srip90512 chr4 117153199 117153199 - unknown germline . no 464 .
srip91440 chr4 131551685 131551685 + unknown germline . no 464 .
srip91775 chr4 132357338 132357338 + unknown germline . no 464 .
srip93355 chr4 152732795 152732795 - unknown germline . no 464 .
srip93585 chr4 153061908 153061908 - unknown germline . no 464 .
srip94288 chr4 167476673 167476673 - unknown germline . no 464 .
srip94602 chr4 172560778 172560778 . unknown germline validated no 464 .
srip94844 chr4 177308485 177308485 - unknown germline . no 464 .
srip96205 chr5 11391249 11391249 + unknown germline . no 464 CTNND2
srip97509 chr5 33633321 33633321 - unknown germline . no 464 ADAMTS12
srip98627 chr5 46402608 46402608 - unknown germline . no 464 .
srip99434 chr5 68263449 68263449 - unknown germline . no 464 .
srip99654 chr5 71055155 71055155 - unknown germline . no 464 .
srip100326 chr5 89450757 89450757 + unknown germline . no 464 .
srip101178 chr5 96952628 96952628 - unknown germline . no 464 .
srip101341 chr5 99234391 99234391 - unknown germline . no 464 .
srip102127 chr5 109480243 109480243 - unknown germline . no 464 .
srip103135 chr5 125012524 125012524 - unknown germline . no 464 .
srip104738 chr5 152982343 152982343 - unknown germline . no 464 GRIA1
srip106257 chr5 177401287 177401287 + unknown germline . no 464 .
srip106503 chr5 180329628 180329628 + unknown germline . no 464 BTNL8
srip106697 chr6 6778632 6778632 - unknown germline . no 464 .
srip106983 chr6 13191006 13191006 + unknown germline . no 464 PHACTR1
srip107256 chr6 13503024 13503024 + unknown germline . no 464 .
srip108041 chr6 32589537 32589537 + unknown germline . no 464 .
srip108484 chr6 46310275 46310275 + unknown germline . no 464 .
srip109293 chr6 62482852 62482852 + unknown germline . no 464 KHDRBS2
srip109716 chr6 65105560 65105560 - unknown germline . no 464 EYS
srip110024 chr6 69198715 69198715 - unknown germline . no 464 .
srip110811 chr6 77980628 77980628 - unknown germline . no 464 .
srip111587 chr6 89122014 89122014 - unknown germline . no 464 .
srip111739 chr6 90839145 90839145 - unknown germline . no 464 BACH2
srip111926 chr6 91669497 91669497 - unknown germline . no 464 .
srip112543 chr6 102283722 102283722 - unknown germline . no 464 GRIK2
srip114308 chr6 148163559 148163559 + unknown germline . no 464 .
srip114557 chr6 148195781 148195781 + unknown germline . no 464 .
srip115345 chr6 162181244 162181244 + unknown germline . no 464 PARK2
srip116418 chr7 20170522 20170522 . unknown germline validated no 464 .
srip117502 chr7 52789753 52789753 . unknown germline validated no 464 .
srip117803 chr7 57728143 57728143 - unknown germline . no 464 LOC100287663
srip118115 chr7 62492918 62492918 + unknown germline . no 464 .
srip118416 chr7 66591159 66591159 - unknown germline . no 464 TYW1
srip118753 chr7 70188666 70188666 - unknown germline . no 464 AUTS2
srip119096 chr7 76919295 76919295 + unknown germline . no 464 CCDC146
srip119566 chr7 84901705 84901705 - unknown germline . no 464 .
srip120045 chr7 85044725 85044725 + unknown germline . no 464 .
srip120256 chr7 85044855 85044855 . unknown germline validated no 464 .
srip121337 chr7 107829239 107829239 + unknown germline . no 464 NRCAM
srip122393 chr7 112789596 112789596 - unknown germline . no 464 .
srip122853 chr7 127603391 127603391 + unknown germline . no 464 SND1
srip123353 chr7 142818925 142818925 . unknown germline validated no 464 .
srip123939 chr8 4345013 4345013 - unknown germline . no 464 CSMD1
srip125357 chr8 24926529 24926529 - unknown germline . no 464 .
srip125761 chr8 40433163 40433163 - unknown germline . no 464 ZMAT4
srip126248 chr8 56620569 56620569 - unknown germline . no 464 .
srip127141 chr8 72399210 72399210 - unknown germline . no 464 .
srip127511 chr8 75723709 75723709 + unknown germline . no 464 .
srip127797 chr8 83640785 83640785 + unknown germline . no 464 .
srip128415 chr8 90307026 90307026 . unknown germline validated no 464 .
srip129020 chr8 115773129 115773129 . unknown germline validated no 464 .
srip129287 chr8 115881756 115881756 + unknown germline . no 464 .
srip129755 chr8 123111073 123111073 + unknown germline . no 464 .
srip130245 chr8 132865833 132865833 + unknown germline . no 464 .
srip130874 chr9 6290459 6290459 + unknown germline . no 464 .
srip131803 chr9 20063550 20063550 - unknown germline . no 464 .
srip132106 chr9 29260632 29260632 . unknown germline validated no 464 .
srip132410 chr9 30674122 30674122 . unknown germline validated no 464 .
srip132479 chr9 30674437 30674437 - unknown germline . no 464 .
srip132704 chr9 31748212 31748212 + unknown germline . no 464 .
srip133097 chr9 32463872 32463872 - unknown germline . no 464 DDX58
srip133779 chr9 68420638 68420638 . unknown germline validated no 464 .
srip133860 chr9 68494241 68494241 - unknown germline . no 464 .
srip133910 chr9 72318293 72318293 . unknown germline validated no 464 .
srip135347 chr9 108539394 108539394 - unknown germline . no 464 .
srip135798 chr9 118083818 118083818 - unknown germline . no 464 DEC1
srip138202 chrX 63516573 63516573 + unknown germline . no 464 MTMR8
srip138920 chrX 75949527 75949527 - unknown germline . no 464 .
srip139453 chrX 85781940 85781940 . unknown germline validated no 464 DACH2
srip139613 chrX 98264216 98264216 . unknown germline validated no 464 .
srip141726 chrX 138246341 138246341 + unknown germline . no 464 FGF13
srip141823 chrX 140514870 140514870 . unknown germline validated no 464 .