euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

147 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1292 chr1 67544680 67544680 + unknown germline . yes 318 .
srip1706 chr1 75192881 75192881 - unknown germline . no 318 CRYZ
srip3445 chr1 111526302 111526302 - unknown germline . no 318 .
srip5892 chr1 192262240 192262240 - unknown germline . no 318 .
srip6553 chr1 220378213 220378213 - unknown germline . no 318 RAB3GAP2
srip7271 chr1 242311549 242311549 + unknown germline . no 318 PLD5
srip9141 chr10 66831656 66831656 - unknown germline . no 318 .
srip9849 chr10 83111793 83111793 - unknown germline . no 318 .
srip10105 chr10 87505368 87505368 - unknown germline . no 318 GRID1
srip11652 chr10 124455206 124455206 + unknown germline . no 318 .
srip12051 chr11 1112673 1112673 - unknown germline . no 318 .
srip14021 chr11 41831785 41831785 - unknown germline . no 318 .
srip15189 chr11 58171824 58171824 + unknown germline . no 318 .
srip15589 chr11 60364495 60364495 - unknown germline . no 318 .
srip16217 chr11 79917402 79917402 + unknown germline . yes 318 .
srip17521 chr11 104556111 104556111 - unknown germline . no 318 .
srip18707 chr11 134305626 134305626 - unknown germline . no 318 .
srip19688 chr12 11191350 11191350 - unknown germline . no 318 PRH1-PRR4
srip19964 chr12 12933660 12933660 - unknown germline . no 318 APOLD1
srip20541 chr12 28226400 28226400 - unknown germline . no 318 .
srip21203 chr12 34276519 34276519 - unknown germline . no 318 .
srip21359 chr12 34346159 34346159 + unknown germline . no 318 .
srip22010 chr12 43256961 43256961 - unknown germline . no 318 .
srip22580 chr12 47873142 47873142 + unknown germline . no 318 .
srip23565 chr12 74781462 74781462 - unknown germline . no 318 .
srip25685 chr12 118057334 118057334 - unknown germline . no 318 KSR2
srip25838 chr12 118186914 118186914 + unknown germline . no 318 KSR2
srip27681 chr13 37724174 37724174 + unknown germline . no 318 .
srip28052 chr13 47031518 47031518 + unknown germline . no 318 .
srip29988 chr13 67084854 67084854 - unknown germline . no 318 PCDH9
srip30238 chr13 72968659 72968659 + unknown germline . no 318 .
srip30699 chr13 79259770 79259770 - unknown germline . no 318 .
srip32531 chr13 96116756 96116756 - unknown germline . no 318 CLDN10
srip32769 chr13 97350602 97350602 - unknown germline . no 318 HS6ST3
srip32892 chr13 97421625 97421625 + unknown germline . no 318 HS6ST3
srip33231 chr13 104296211 104296211 - unknown germline . no 318 .
srip33848 chr13 106623455 106623455 - unknown germline . no 318 .
srip34083 chr13 107857461 107857461 - unknown germline . no 318 FAM155A
srip34635 chr14 28116812 28116812 + unknown germline . no 318 LOC728755
srip34878 chr14 28301203 28301203 + unknown germline . no 318 .
srip35626 chr14 36674732 36674732 + unknown germline . no 318 .
srip36505 chr14 42274786 42274786 - unknown germline . no 318 LRFN5
srip36611 chr14 43197213 43197213 + unknown germline . no 318 .
srip37232 chr14 59220376 59220376 + unknown germline . no 318 .
srip38474 chr14 86381784 86381784 - unknown germline . no 318 .
srip39681 chr15 37707869 37707869 - unknown germline . no 318 .
srip40381 chr15 49652329 49652329 + unknown germline . no 318 C15orf33
srip41363 chr15 59794476 59794476 - unknown germline . no 318 FAM81A
srip42081 chr15 72085476 72085476 + unknown germline . no 318 .
srip42809 chr15 98051276 98051276 + unknown germline . no 318 .
srip43896 chr16 8542726 8542726 - unknown germline . no 318 .
srip44223 chr16 20365406 20365406 - unknown germline . no 318 .
srip44841 chr16 32525600 32525600 - unknown germline . no 318 .
srip45343 chr16 33992419 33992419 + unknown germline . no 318 .
srip46040 chr16 71027998 71027998 + unknown germline . no 318 HYDIN
srip46621 chr17 11764485 11764485 + unknown germline . no 318 DNAH9
srip46867 chr17 22150203 22150203 - unknown germline . no 318 .
srip48012 chr17 61404763 61404763 + unknown germline . no 318 TANC2
srip49259 chr18 28732884 28732884 - unknown germline . no 318 DSC1
srip51700 chr18 74960050 74960050 - unknown germline . no 318 .
srip52939 chr2 13631539 13631539 - unknown germline . no 318 .
srip53994 chr2 36381231 36381231 + unknown germline . no 318 .
srip54434 chr2 42051389 42051389 + unknown germline . no 318 .
srip54787 chr2 51655388 51655388 + unknown germline . no 318 .
srip55375 chr2 72413315 72413315 - unknown germline . no 318 EXOC6B
srip55996 chr2 82098017 82098017 + unknown germline . no 318 .
srip60207 chr2 179357273 179357273 + unknown germline . no 318 PLEKHA3
srip60570 chr2 182473910 182473910 + unknown germline . no 318 CERKL
srip62009 chr2 221503739 221503739 - unknown germline . no 318 .
srip62229 chr2 230341537 230341537 + unknown germline . no 318 DNER
srip62500 chr2 235519783 235519783 + unknown germline . no 318 .
srip63028 chr20 7292173 7292173 + unknown germline . no 318 .
srip63361 chr20 16479480 16479480 - unknown germline . no 318 KIF16B
srip63564 chr20 17860913 17860913 + unknown germline . no 318 .
srip63730 chr20 21148878 21148878 - unknown germline . no 318 PLK1S1
srip64196 chr20 29638560 29638560 + unknown germline . no 318 .
srip66652 chr21 29069160 29069160 + unknown germline . no 318 .
srip67178 chr22 19210889 19210889 + unknown germline . no 318 CLTCL1
srip67961 chr22 29007687 29007687 - unknown germline . yes 318 TTC28
srip68617 chr22 44324578 44324578 - unknown germline . no 318 PNPLA3
srip71218 chr3 27239558 27239558 - unknown germline . no 318 .
srip71464 chr3 36146939 36146939 - unknown germline . no 318 .
srip72393 chr3 55788556 55788556 + unknown germline . no 318 ERC2
srip72883 chr3 59852877 59852877 + unknown germline . no 318 FHIT
srip74308 chr3 80590146 80590146 - unknown germline . no 318 .
srip76953 chr3 123590700 123590700 + unknown germline . no 318 MYLK
srip78399 chr3 151148531 151148531 - unknown germline . no 318 MED12L
srip80491 chr3 180877922 180877922 + unknown germline . no 318 .
srip80977 chr3 184677979 184677979 - unknown germline . no 318 VPS8
srip81206 chr3 186372113 186372113 + unknown germline . no 318 .
srip82794 chr4 18162627 18162627 - unknown germline . no 318 .
srip84106 chr4 42984135 42984135 + unknown germline . no 318 GRXCR1
srip84353 chr4 45890702 45890702 - unknown germline . no 318 .
srip85179 chr4 56713958 56713958 - unknown germline . no 318 .
srip85303 chr4 57497040 57497040 - unknown germline . no 318 .
srip85662 chr4 58917503 58917503 - unknown germline . no 318 .
srip86013 chr4 61697133 61697133 - unknown germline . no 318 .
srip86238 chr4 66809039 66809039 - unknown germline . no 318 .
srip86685 chr4 69612552 69612552 - unknown germline . no 318 .
srip87511 chr4 81242092 81242092 - unknown germline . no 318 .
srip88429 chr4 103043669 103043669 - unknown germline . no 318 .
srip89074 chr4 104930177 104930177 + unknown germline . no 318 .
srip89501 chr4 110248303 110248303 - unknown germline . no 318 .
srip90451 chr4 117153199 117153199 - unknown germline . no 318 .
srip90752 chr4 120717502 120717502 - unknown germline . no 318 .
srip90933 chr4 125208813 125208813 + unknown germline . no 318 .
srip91341 chr4 131551685 131551685 + unknown germline . no 318 .
srip91541 chr4 132181636 132181636 - unknown germline . no 318 .
srip91661 chr4 132357338 132357338 + unknown germline . no 318 .
srip92380 chr4 138177310 138177310 + unknown germline . no 318 .
srip92837 chr4 138413516 138413516 - unknown germline . no 318 .
srip93450 chr4 153061908 153061908 - unknown germline . no 318 .
srip94710 chr4 177308485 177308485 - unknown germline . no 318 .
srip95528 chr5 4621424 4621424 - unknown germline . no 318 .
srip100196 chr5 89450757 89450757 + unknown germline . no 318 .
srip101114 chr5 96952628 96952628 - unknown germline . no 318 .
srip101272 chr5 99234391 99234391 - unknown germline . no 318 .
srip102013 chr5 109480243 109480243 - unknown germline . no 318 .
srip104979 chr5 155619852 155619852 + unknown germline . no 318 .
srip106146 chr5 177401287 177401287 + unknown germline . no 318 .
srip106795 chr6 12237456 12237456 - unknown germline . no 318 .
srip107147 chr6 13503024 13503024 + unknown germline . no 318 .
srip109617 chr6 65105560 65105560 - unknown germline . no 318 EYS
srip110191 chr6 73089780 73089780 + unknown germline . no 318 RIMS1
srip110729 chr6 77980628 77980628 - unknown germline . no 318 .
srip113987 chr6 145500885 145500885 - unknown germline . no 318 .
srip114481 chr6 148195781 148195781 + unknown germline . no 318 .
srip115249 chr6 162181244 162181244 + unknown germline . no 318 PARK2
srip115858 chr6 163113050 163113050 - unknown germline . no 318 PARK2
srip118041 chr7 62492918 62492918 + unknown germline . no 318 .
srip119000 chr7 76919295 76919295 + unknown germline . no 318 CCDC146
srip119475 chr7 84901705 84901705 - unknown germline . no 318 .
srip120587 chr7 92680706 92680706 - unknown germline . no 318 .
srip124604 chr8 8334290 8334290 - unknown germline . yes 318 .
srip124908 chr8 18455788 18455788 + unknown germline . yes 318 PSD3
srip126149 chr8 56620569 56620569 - unknown germline . no 318 .
srip126647 chr8 67381850 67381850 - unknown germline . no 318 .
srip127062 chr8 72399210 72399210 - unknown germline . no 318 .
srip127690 chr8 83640785 83640785 + unknown germline . no 318 .
srip128102 chr8 85428593 85428593 + unknown germline . no 318 RALYL
srip130218 chr8 132865833 132865833 + unknown germline . no 318 .
srip131957 chr9 29114733 29114733 - unknown germline . no 318 .
srip137671 chrX 58482468 58482468 - unknown germline . no 318 .
srip137851 chrX 62816726 62816726 + unknown germline . no 318 .
srip138035 chrX 63470223 63470223 - unknown germline . no 318 .
srip138813 chrX 75949527 75949527 - unknown germline . no 318 .
srip141666 chrX 138246341 138246341 + unknown germline . no 318 FGF13