euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip140 chr1 24775512 24775512 + unknown germline validated no 586 NIPAL3
srip1960 chr1 79023145 79023145 + unknown germline validated no 586 .
srip2060 chr1 83609125 83609125 - unknown germline validated no 586 .
srip2888 chr1 102545056 102545056 - unknown germline validated no 586 .
srip3085 chr1 102569114 102569114 + unknown germline validated no 586 .
srip3642 chr1 114976882 114976882 - unknown germline validated no 586 TRIM33
srip4160 chr1 152443698 152443698 - unknown germline validated no 586 .
srip4640 chr1 165531706 165531706 - unknown germline validated no 586 LRRC52;LOC400794
srip5269 chr1 179575197 179575197 - unknown germline validated no 586 TDRD5
srip5853 chr1 192262162 192262162 - unknown germline validated no 586 .
srip7426 chr1 242496596 242496596 + unknown germline validated no 586 PLD5
srip7800 chr10 19065550 19065550 - unknown germline validated no 586 .
srip10473 chr10 91717532 91717532 - unknown germline validated no 586 .
srip11238 chr10 110453931 110453931 + unknown germline validated no 586 .
srip11987 chr10 133016641 133016641 - unknown germline validated no 586 TCERG1L
srip12003 chr10 133528481 133528481 - unknown germline validated no 586 .
srip12568 chr11 15380364 15380364 + unknown germline validated no 586 .
srip12653 chr11 19652293 19652293 - unknown germline validated no 586 NAV2
srip12959 chr11 26159927 26159927 - unknown germline validated no 586 .
srip13279 chr11 30180703 30180703 + unknown germline validated no 586 .
srip13927 chr11 37811369 37811369 + unknown germline validated no 586 .
srip15876 chr11 67599491 67599491 + unknown germline validated no 586 LOC100421859
srip15892 chr11 67777074 67777074 - unknown germline validated no 586 ALDH3B1
srip16484 chr11 83652293 83652293 - unknown germline validated no 586 DLG2
srip16823 chr11 91203062 91203062 - unknown germline validated no 586 .
srip17816 chr11 105479182 105479182 + unknown germline validated no 586 .
srip18289 chr11 114895734 114895734 + unknown germline validated no 586 .
srip18530 chr11 123241906 123241906 + unknown germline validated no 586 .
srip20430 chr12 25775766 25775766 - unknown germline validated no 586 IFLTD1
srip21119 chr12 34017161 34017161 - unknown germline validated no 586 .
srip21938 chr12 42637062 42637062 + unknown germline validated no 586 .
srip22841 chr12 48929157 48929157 + unknown germline validated no 586 .
srip24660 chr12 84965334 84965334 + unknown germline validated no 586 .
srip24934 chr12 85506395 85506395 + unknown germline validated no 586 LRRIQ1
srip25417 chr12 117814367 117814367 - unknown germline validated no 586 .
srip28026 chr13 42771428 42771428 + unknown germline validated no 586 DGKH
srip28503 chr13 61221023 61221023 - unknown germline validated no 586 .
srip35393 chr14 31150525 31150525 - unknown germline validated no 586 SCFD1
srip37072 chr14 51311482 51311482 - unknown germline validated no 586 .
srip37367 chr14 59220500 59220500 + unknown germline validated no 586 .
srip37688 chr14 67419610 67419610 - unknown germline validated no 586 GPHN
srip37959 chr14 68784350 68784350 + unknown germline validated no 586 RAD51B
srip38170 chr14 71197806 71197806 + unknown germline validated no 586 MAP3K9
srip38193 chr14 72333521 72333521 - unknown germline validated no 586 .
srip38425 chr14 86307570 86307570 + unknown germline validated no 586 .
srip38447 chr14 86381662 86381662 - unknown germline validated no 586 .
srip38839 chr14 90497183 90497183 - unknown germline validated no 586 TDP1
srip39111 chr15 25253952 25253952 - unknown germline validated no 586 SNRPN
srip39138 chr15 27875825 27875825 + unknown germline validated no 586 .
srip39589 chr15 35654003 35654003 - unknown germline validated no 586 .
srip39634 chr15 37707731 37707731 - unknown germline validated no 586 .
srip39910 chr15 45567581 45567581 - unknown germline validated no 586 SLC28A2
srip40694 chr15 51189570 51189570 + unknown germline validated no 586 .
srip40742 chr15 51843910 51843910 + unknown germline validated no 586 DMXL2
srip40965 chr15 53956368 53956368 + unknown germline validated no 586 WDR72
srip41264 chr15 56251651 56251651 + unknown germline validated no 586 NEDD4
srip41520 chr15 61328808 61328808 - unknown germline validated no 586 RORA
srip42629 chr15 85649502 85649502 + unknown germline validated no 586 PDE8A
srip43464 chr16 5338879 5338879 + unknown germline validated no 586 .
srip44045 chr16 16934247 16934247 - unknown germline validated no 586 .
srip44448 chr16 22945701 22945701 - unknown germline validated no 586 .
srip44794 chr16 32525376 32525376 - unknown germline validated no 586 .
srip45718 chr16 55292232 55292232 + unknown germline validated no 586 .
srip46476 chr16 89978226 89978226 + unknown germline validated no 586 .
srip47383 chr17 28398481 28398481 + unknown germline validated no 586 EFCAB5
srip47721 chr17 32813910 32813910 + unknown germline validated no 586 .
srip48101 chr17 64551116 64551116 - unknown germline validated no 586 PRKCA
srip48457 chr17 68357562 68357562 + unknown germline validated no 586 .
srip49863 chr18 49216083 49216083 - unknown germline validated no 586 .
srip51013 chr18 59579982 59579982 + unknown germline validated no 586 .
srip51414 chr18 69617399 69617399 + unknown germline validated no 586 .
srip52175 chr19 24602154 24602154 - unknown germline validated no 586 .
srip53167 chr2 22706685 22706685 + unknown germline validated no 586 .
srip53962 chr2 35879443 35879443 + unknown germline validated no 586 .
srip54951 chr2 53460161 53460161 + unknown germline validated no 586 .
srip56630 chr2 92306795 92306795 + unknown germline validated no 586 .
srip56652 chr2 92319432 92319432 - unknown germline validated no 586 .
srip56686 chr2 92324483 92324483 - unknown germline validated no 586 .
srip56793 chr2 106151450 106151450 - unknown germline validated no 586 .
srip56916 chr2 106163220 106163220 + unknown germline validated no 586 .
srip58398 chr2 143370703 143370703 - unknown germline validated no 586 .
srip58590 chr2 144010847 144010847 + unknown germline validated no 586 ARHGAP15
srip59720 chr2 168735299 168735299 - unknown germline validated no 586 .
srip61641 chr2 212707721 212707721 + unknown germline validated no 586 ERBB4
srip62374 chr2 230341968 230341968 + unknown germline validated no 586 DNER
srip62650 chr2 235519844 235519844 + unknown germline validated no 586 .
srip62749 chr20 6105791 6105791 - unknown germline validated no 586 .
srip63334 chr20 16479373 16479373 - unknown germline validated no 586 KIF16B
srip64145 chr20 29591676 29591676 + unknown germline validated no 586 .
srip64607 chr20 41951972 41951972 - unknown germline validated no 586 .
srip65645 chr21 19517214 19517214 - unknown germline validated no 586 .
srip67152 chr22 17246312 17246312 + unknown germline validated no 586 .
srip67252 chr22 19210951 19210951 + unknown germline validated no 586 CLTCL1
srip68590 chr22 44324380 44324380 - unknown germline validated no 586 PNPLA3
srip69827 chr3 3408404 3408404 + unknown germline validated no 586 .
srip70561 chr3 21235006 21235006 + unknown germline validated no 586 .
srip70651 chr3 22440113 22440113 + unknown germline validated no 586 .
srip71944 chr3 38626129 38626129 + unknown germline validated no 586 SCN5A
srip72055 chr3 44300491 44300491 - unknown germline validated no 586 C3orf77
srip72839 chr3 58783947 58783947 + unknown germline validated no 586 C3orf67
srip73497 chr3 65685575 65685575 + unknown germline validated no 586 MAGI1
srip73892 chr3 75670011 75670011 - unknown germline validated no 586 UNC93B3
srip73908 chr3 75691138 75691138 - unknown germline validated no 586 .
srip74060 chr3 79216420 79216420 + unknown germline validated no 586 ROBO1
srip74632 chr3 81990731 81990731 - unknown germline validated no 586 .
srip75627 chr3 85576631 85576631 + unknown germline validated no 586 CADM2
srip75967 chr3 90456520 90456520 - unknown germline validated no 586 .
srip76917 chr3 123033794 123033794 + unknown germline validated no 586 ADCY5
srip77302 chr3 123590896 123590896 + unknown germline validated no 586 MYLK
srip77511 chr3 131069981 131069981 + unknown germline validated no 586 LOC339874
srip78089 chr3 143121667 143121667 - unknown germline validated no 586 SLC9A9
srip78344 chr3 150210561 150210561 - unknown germline validated no 586 .
srip79287 chr3 161145847 161145847 + unknown germline validated no 586 RPL23AP42
srip79897 chr3 169270360 169270360 + unknown germline validated no 586 MECOM
srip81847 chr3 193354030 193354030 - unknown germline validated no 586 OPA1
srip83863 chr4 29322214 29322214 + unknown germline validated no 586 .
srip85480 chr4 58126491 58126491 - unknown germline validated no 586 .
srip85635 chr4 58917248 58917248 - unknown germline validated no 586 .
srip87049 chr4 71093393 71093393 + unknown germline validated no 586 C4orf7
srip87398 chr4 80768650 80768650 + unknown germline validated no 586 GDEP
srip89035 chr4 104214774 104214774 + unknown germline validated no 586 .
srip90363 chr4 115132827 115132827 + unknown germline validated no 586 .
srip91190 chr4 128965197 128965197 - unknown germline validated no 586 .
srip91521 chr4 132181331 132181331 - unknown germline validated no 586 .
srip93292 chr4 151582619 151582619 + unknown germline validated no 586 LRBA
srip93333 chr4 152732601 152732601 - unknown germline validated no 586 .
srip95403 chr4 190659942 190659942 + unknown germline validated no 586 .
srip96100 chr5 9055982 9055982 + unknown germline validated no 586 SEMA5A
srip96820 chr5 20458616 20458616 + unknown germline validated no 586 .
srip96998 chr5 23070279 23070279 + unknown germline validated no 586 .
srip97980 chr5 33797341 33797341 - unknown germline validated no 586 ADAMTS12
srip98401 chr5 41602121 41602121 + unknown germline validated no 586 .
srip99128 chr5 57428108 57428108 + unknown germline validated no 586 .
srip99152 chr5 59591041 59591041 + unknown germline validated no 586 PDE4D
srip99329 chr5 67721751 67721751 + unknown germline validated no 586 .
srip99621 chr5 68618005 68618005 - unknown germline validated no 586 .
srip102657 chr5 112449536 112449536 - unknown germline validated no 586 MCC
srip102905 chr5 124155264 124155264 - unknown germline validated no 586 .
srip103389 chr5 125040179 125040179 + unknown germline validated no 586 .
srip103567 chr5 132934117 132934117 + unknown germline validated no 586 FSTL4
srip104024 chr5 144233373 144233373 - unknown germline validated no 586 .
srip104041 chr5 144330739 144330739 - unknown germline validated no 586 .
srip104874 chr5 155333706 155333706 - unknown germline validated no 586 .
srip105297 chr5 157867170 157867170 - unknown germline validated no 586 .
srip105505 chr5 159351006 159351006 - unknown germline validated no 586 ADRA1B
srip106904 chr6 13135020 13135020 + unknown germline validated no 586 PHACTR1
srip107580 chr6 13503253 13503253 + unknown germline validated no 586 .
srip107647 chr6 18227737 18227737 + unknown germline validated no 586 DEK
srip108147 chr6 36498040 36498040 + unknown germline validated no 586 STK38
srip108358 chr6 45934271 45934271 + unknown germline validated no 586 CLIC5
srip108827 chr6 53285027 53285027 + unknown germline validated no 586 .
srip108966 chr6 56758359 56758359 - unknown germline validated no 586 LOC100652827
srip110339 chr6 73716580 73716580 + unknown germline validated no 586 KCNQ5
srip110577 chr6 77379855 77379855 - unknown germline validated no 586 .
srip111320 chr6 83678042 83678042 - unknown germline validated no 586 UBE2CBP
srip112855 chr6 108786737 108786737 - unknown germline validated no 586 LACE1
srip113438 chr6 125692148 125692148 - unknown germline validated no 586 .
srip113643 chr6 142449929 142449929 - unknown germline validated no 586 .
srip116440 chr7 22783334 22783334 + unknown germline validated no 586 .
srip116503 chr7 25081285 25081285 - unknown germline validated no 586 .
srip116611 chr7 26794974 26794974 + unknown germline validated no 586 SKAP2
srip116797 chr7 34440719 34440719 + unknown germline validated no 586 AAA1
srip118008 chr7 62178856 62178856 + unknown germline validated no 586 .
srip118358 chr7 66590847 66590847 - unknown germline validated no 586 TYW1
srip120396 chr7 88003097 88003097 - unknown germline validated no 586 .
srip121150 chr7 105968058 105968058 + unknown germline validated no 586 .
srip122648 chr7 122124598 122124598 + unknown germline validated no 586 CADPS2
srip123490 chr7 145115410 145115410 - unknown germline validated no 586 .
srip123735 chr7 155158659 155158659 - unknown germline validated no 586 .
srip124840 chr8 11731373 11731373 + unknown germline validated no 586 .
srip124968 chr8 18455923 18455923 + unknown germline validated yes 586 PSD3
srip125268 chr8 24926274 24926274 - unknown germline validated no 586 .
srip125727 chr8 40432892 40432892 - unknown germline validated no 586 ZMAT4
srip125834 chr8 43784668 43784668 + unknown germline validated no 586 .
srip126417 chr8 58348186 58348186 + unknown germline validated no 586 .
srip127025 chr8 72399104 72399104 - unknown germline validated no 586 .
srip128038 chr8 83740734 83740734 + unknown germline validated no 586 .
srip128198 chr8 85428807 85428807 + unknown germline validated no 586 RALYL
srip128860 chr8 112121121 112121121 - unknown germline validated no 586 .
srip129027 chr8 115788352 115788352 - unknown germline validated no 586 .
srip130577 chr9 4265600 4265600 + unknown germline validated no 586 GLIS3
srip131165 chr9 7327229 7327229 - unknown germline validated no 586 .
srip131182 chr9 7426706 7426706 - unknown germline validated no 586 .
srip133890 chr9 70999188 70999188 + unknown germline validated no 586 PGM5
srip134161 chr9 82082611 82082611 - unknown germline validated no 586 .
srip135469 chr9 110018307 110018307 - unknown germline validated no 586 .
srip135600 chr9 111565179 111565179 + unknown germline validated no 586 .
srip136196 chrX 3878925 3878925 - unknown germline validated no 586 .
srip136371 chrX 11953283 11953283 - unknown germline validated yes 586 .
srip136393 chrX 14151668 14151668 - unknown germline validated no 586 .
srip136606 chrX 21300794 21300794 + unknown germline validated no 586 .
srip137364 chrX 55584934 55584934 - unknown germline validated no 586 .
srip137807 chrX 61870985 61870985 + unknown germline validated no 586 .
srip139801 chrX 98920814 98920814 - unknown germline validated no 586 LOC442459
srip140105 chrX 102363307 102363307 + unknown germline validated no 586 .
srip140315 chrX 111557667 111557667 - unknown germline validated no 586 ZCCHC16
srip140656 chrX 119892535 119892535 - unknown germline validated no 586 .
srip141171 chrX 124637032 124637032 - unknown germline validated no 586 .
srip141207 chrX 129525062 129525062 - unknown germline validated no 586 .
srip141579 chrX 136180970 136180970 - unknown germline validated no 586 .
srip142292 chrY 13490753 13490753 + unknown germline validated no 586 .
srip142340 chrY 13878782 13878782 + unknown germline validated no 586 .
srip142484 chrY 58980643 58980643 - unknown germline validated no 586 .