euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip138 chr1 24775512 24775512 + unknown germline validated no 584 NIPAL3
srip1958 chr1 79023145 79023145 + unknown germline validated no 584 .
srip2058 chr1 83609125 83609125 - unknown germline validated no 584 .
srip2886 chr1 102545056 102545056 - unknown germline validated no 584 .
srip3083 chr1 102569114 102569114 + unknown germline validated no 584 .
srip3640 chr1 114976882 114976882 - unknown germline validated no 584 TRIM33
srip4158 chr1 152443698 152443698 - unknown germline validated no 584 .
srip4638 chr1 165531706 165531706 - unknown germline validated no 584 LRRC52;LOC400794
srip5267 chr1 179575197 179575197 - unknown germline validated no 584 TDRD5
srip5851 chr1 192262162 192262162 - unknown germline validated no 584 .
srip7424 chr1 242496596 242496596 + unknown germline validated no 584 PLD5
srip7798 chr10 19065550 19065550 - unknown germline validated no 584 .
srip10471 chr10 91717532 91717532 - unknown germline validated no 584 .
srip11236 chr10 110453931 110453931 + unknown germline validated no 584 .
srip11985 chr10 133016641 133016641 - unknown germline validated no 584 TCERG1L
srip12001 chr10 133528481 133528481 - unknown germline validated no 584 .
srip12566 chr11 15380364 15380364 + unknown germline validated no 584 .
srip12651 chr11 19652293 19652293 - unknown germline validated no 584 NAV2
srip12957 chr11 26159927 26159927 - unknown germline validated no 584 .
srip13277 chr11 30180703 30180703 + unknown germline validated no 584 .
srip13925 chr11 37811369 37811369 + unknown germline validated no 584 .
srip15874 chr11 67599491 67599491 + unknown germline validated no 584 LOC100421859
srip15890 chr11 67777074 67777074 - unknown germline validated no 584 ALDH3B1
srip16482 chr11 83652293 83652293 - unknown germline validated no 584 DLG2
srip16821 chr11 91203062 91203062 - unknown germline validated no 584 .
srip17814 chr11 105479182 105479182 + unknown germline validated no 584 .
srip18287 chr11 114895734 114895734 + unknown germline validated no 584 .
srip18528 chr11 123241906 123241906 + unknown germline validated no 584 .
srip20428 chr12 25775766 25775766 - unknown germline validated no 584 IFLTD1
srip21117 chr12 34017161 34017161 - unknown germline validated no 584 .
srip21936 chr12 42637062 42637062 + unknown germline validated no 584 .
srip22839 chr12 48929157 48929157 + unknown germline validated no 584 .
srip24658 chr12 84965334 84965334 + unknown germline validated no 584 .
srip24932 chr12 85506395 85506395 + unknown germline validated no 584 LRRIQ1
srip25415 chr12 117814367 117814367 - unknown germline validated no 584 .
srip28024 chr13 42771428 42771428 + unknown germline validated no 584 DGKH
srip28501 chr13 61221023 61221023 - unknown germline validated no 584 .
srip35391 chr14 31150525 31150525 - unknown germline validated no 584 SCFD1
srip37070 chr14 51311482 51311482 - unknown germline validated no 584 .
srip37365 chr14 59220500 59220500 + unknown germline validated no 584 .
srip37686 chr14 67419610 67419610 - unknown germline validated no 584 GPHN
srip37957 chr14 68784350 68784350 + unknown germline validated no 584 RAD51B
srip38168 chr14 71197806 71197806 + unknown germline validated no 584 MAP3K9
srip38191 chr14 72333521 72333521 - unknown germline validated no 584 .
srip38423 chr14 86307570 86307570 + unknown germline validated no 584 .
srip38445 chr14 86381662 86381662 - unknown germline validated no 584 .
srip38837 chr14 90497183 90497183 - unknown germline validated no 584 TDP1
srip39109 chr15 25253952 25253952 - unknown germline validated no 584 SNRPN
srip39136 chr15 27875825 27875825 + unknown germline validated no 584 .
srip39587 chr15 35654003 35654003 - unknown germline validated no 584 .
srip39632 chr15 37707731 37707731 - unknown germline validated no 584 .
srip39908 chr15 45567581 45567581 - unknown germline validated no 584 SLC28A2
srip40692 chr15 51189570 51189570 + unknown germline validated no 584 .
srip40740 chr15 51843910 51843910 + unknown germline validated no 584 DMXL2
srip40963 chr15 53956368 53956368 + unknown germline validated no 584 WDR72
srip41262 chr15 56251651 56251651 + unknown germline validated no 584 NEDD4
srip41518 chr15 61328808 61328808 - unknown germline validated no 584 RORA
srip42627 chr15 85649502 85649502 + unknown germline validated no 584 PDE8A
srip43462 chr16 5338879 5338879 + unknown germline validated no 584 .
srip44043 chr16 16934247 16934247 - unknown germline validated no 584 .
srip44446 chr16 22945701 22945701 - unknown germline validated no 584 .
srip44792 chr16 32525376 32525376 - unknown germline validated no 584 .
srip45716 chr16 55292232 55292232 + unknown germline validated no 584 .
srip46474 chr16 89978226 89978226 + unknown germline validated no 584 .
srip47381 chr17 28398481 28398481 + unknown germline validated no 584 EFCAB5
srip47719 chr17 32813910 32813910 + unknown germline validated no 584 .
srip48099 chr17 64551116 64551116 - unknown germline validated no 584 PRKCA
srip48455 chr17 68357562 68357562 + unknown germline validated no 584 .
srip49861 chr18 49216083 49216083 - unknown germline validated no 584 .
srip51011 chr18 59579982 59579982 + unknown germline validated no 584 .
srip51412 chr18 69617399 69617399 + unknown germline validated no 584 .
srip52173 chr19 24602154 24602154 - unknown germline validated no 584 .
srip53165 chr2 22706685 22706685 + unknown germline validated no 584 .
srip53960 chr2 35879443 35879443 + unknown germline validated no 584 .
srip54949 chr2 53460161 53460161 + unknown germline validated no 584 .
srip56628 chr2 92306795 92306795 + unknown germline validated no 584 .
srip56650 chr2 92319432 92319432 - unknown germline validated no 584 .
srip56684 chr2 92324483 92324483 - unknown germline validated no 584 .
srip56791 chr2 106151450 106151450 - unknown germline validated no 584 .
srip56914 chr2 106163220 106163220 + unknown germline validated no 584 .
srip58396 chr2 143370703 143370703 - unknown germline validated no 584 .
srip58588 chr2 144010847 144010847 + unknown germline validated no 584 ARHGAP15
srip59718 chr2 168735299 168735299 - unknown germline validated no 584 .
srip61639 chr2 212707721 212707721 + unknown germline validated no 584 ERBB4
srip62372 chr2 230341968 230341968 + unknown germline validated no 584 DNER
srip62648 chr2 235519844 235519844 + unknown germline validated no 584 .
srip62747 chr20 6105791 6105791 - unknown germline validated no 584 .
srip63332 chr20 16479373 16479373 - unknown germline validated no 584 KIF16B
srip64143 chr20 29591676 29591676 + unknown germline validated no 584 .
srip64605 chr20 41951972 41951972 - unknown germline validated no 584 .
srip65643 chr21 19517214 19517214 - unknown germline validated no 584 .
srip67150 chr22 17246312 17246312 + unknown germline validated no 584 .
srip67250 chr22 19210951 19210951 + unknown germline validated no 584 CLTCL1
srip68588 chr22 44324380 44324380 - unknown germline validated no 584 PNPLA3
srip69825 chr3 3408404 3408404 + unknown germline validated no 584 .
srip70559 chr3 21235006 21235006 + unknown germline validated no 584 .
srip70649 chr3 22440113 22440113 + unknown germline validated no 584 .
srip71942 chr3 38626129 38626129 + unknown germline validated no 584 SCN5A
srip72053 chr3 44300491 44300491 - unknown germline validated no 584 C3orf77
srip72837 chr3 58783947 58783947 + unknown germline validated no 584 C3orf67
srip73495 chr3 65685575 65685575 + unknown germline validated no 584 MAGI1
srip73890 chr3 75670011 75670011 - unknown germline validated no 584 UNC93B3
srip73906 chr3 75691138 75691138 - unknown germline validated no 584 .
srip74058 chr3 79216420 79216420 + unknown germline validated no 584 ROBO1
srip74630 chr3 81990731 81990731 - unknown germline validated no 584 .
srip75625 chr3 85576631 85576631 + unknown germline validated no 584 CADM2
srip75965 chr3 90456520 90456520 - unknown germline validated no 584 .
srip76915 chr3 123033794 123033794 + unknown germline validated no 584 ADCY5
srip77300 chr3 123590896 123590896 + unknown germline validated no 584 MYLK
srip77509 chr3 131069981 131069981 + unknown germline validated no 584 LOC339874
srip78087 chr3 143121667 143121667 - unknown germline validated no 584 SLC9A9
srip78342 chr3 150210561 150210561 - unknown germline validated no 584 .
srip79285 chr3 161145847 161145847 + unknown germline validated no 584 RPL23AP42
srip79895 chr3 169270360 169270360 + unknown germline validated no 584 MECOM
srip81845 chr3 193354030 193354030 - unknown germline validated no 584 OPA1
srip83861 chr4 29322214 29322214 + unknown germline validated no 584 .
srip85478 chr4 58126491 58126491 - unknown germline validated no 584 .
srip85633 chr4 58917248 58917248 - unknown germline validated no 584 .
srip87047 chr4 71093393 71093393 + unknown germline validated no 584 C4orf7
srip87396 chr4 80768650 80768650 + unknown germline validated no 584 GDEP
srip89033 chr4 104214774 104214774 + unknown germline validated no 584 .
srip90361 chr4 115132827 115132827 + unknown germline validated no 584 .
srip91188 chr4 128965197 128965197 - unknown germline validated no 584 .
srip91519 chr4 132181331 132181331 - unknown germline validated no 584 .
srip93290 chr4 151582619 151582619 + unknown germline validated no 584 LRBA
srip93331 chr4 152732601 152732601 - unknown germline validated no 584 .
srip95401 chr4 190659942 190659942 + unknown germline validated no 584 .
srip96098 chr5 9055982 9055982 + unknown germline validated no 584 SEMA5A
srip96818 chr5 20458616 20458616 + unknown germline validated no 584 .
srip96996 chr5 23070279 23070279 + unknown germline validated no 584 .
srip97978 chr5 33797341 33797341 - unknown germline validated no 584 ADAMTS12
srip98399 chr5 41602121 41602121 + unknown germline validated no 584 .
srip99126 chr5 57428108 57428108 + unknown germline validated no 584 .
srip99150 chr5 59591041 59591041 + unknown germline validated no 584 PDE4D
srip99327 chr5 67721751 67721751 + unknown germline validated no 584 .
srip99619 chr5 68618005 68618005 - unknown germline validated no 584 .
srip102655 chr5 112449536 112449536 - unknown germline validated no 584 MCC
srip102903 chr5 124155264 124155264 - unknown germline validated no 584 .
srip103387 chr5 125040179 125040179 + unknown germline validated no 584 .
srip103565 chr5 132934117 132934117 + unknown germline validated no 584 FSTL4
srip104022 chr5 144233373 144233373 - unknown germline validated no 584 .
srip104039 chr5 144330739 144330739 - unknown germline validated no 584 .
srip104872 chr5 155333706 155333706 - unknown germline validated no 584 .
srip105295 chr5 157867170 157867170 - unknown germline validated no 584 .
srip105503 chr5 159351006 159351006 - unknown germline validated no 584 ADRA1B
srip106902 chr6 13135020 13135020 + unknown germline validated no 584 PHACTR1
srip107578 chr6 13503253 13503253 + unknown germline validated no 584 .
srip107645 chr6 18227737 18227737 + unknown germline validated no 584 DEK
srip108145 chr6 36498040 36498040 + unknown germline validated no 584 STK38
srip108356 chr6 45934271 45934271 + unknown germline validated no 584 CLIC5
srip108825 chr6 53285027 53285027 + unknown germline validated no 584 .
srip108964 chr6 56758359 56758359 - unknown germline validated no 584 LOC100652827
srip110337 chr6 73716580 73716580 + unknown germline validated no 584 KCNQ5
srip110575 chr6 77379855 77379855 - unknown germline validated no 584 .
srip111318 chr6 83678042 83678042 - unknown germline validated no 584 UBE2CBP
srip112853 chr6 108786737 108786737 - unknown germline validated no 584 LACE1
srip113436 chr6 125692148 125692148 - unknown germline validated no 584 .
srip113641 chr6 142449929 142449929 - unknown germline validated no 584 .
srip116438 chr7 22783334 22783334 + unknown germline validated no 584 .
srip116501 chr7 25081285 25081285 - unknown germline validated no 584 .
srip116609 chr7 26794974 26794974 + unknown germline validated no 584 SKAP2
srip116795 chr7 34440719 34440719 + unknown germline validated no 584 AAA1
srip118006 chr7 62178856 62178856 + unknown germline validated no 584 .
srip118356 chr7 66590847 66590847 - unknown germline validated no 584 TYW1
srip120394 chr7 88003097 88003097 - unknown germline validated no 584 .
srip121148 chr7 105968058 105968058 + unknown germline validated no 584 .
srip122646 chr7 122124598 122124598 + unknown germline validated no 584 CADPS2
srip123488 chr7 145115410 145115410 - unknown germline validated no 584 .
srip123733 chr7 155158659 155158659 - unknown germline validated no 584 .
srip124838 chr8 11731373 11731373 + unknown germline validated no 584 .
srip124966 chr8 18455923 18455923 + unknown germline validated yes 584 PSD3
srip125266 chr8 24926274 24926274 - unknown germline validated no 584 .
srip125725 chr8 40432892 40432892 - unknown germline validated no 584 ZMAT4
srip125832 chr8 43784668 43784668 + unknown germline validated no 584 .
srip126415 chr8 58348186 58348186 + unknown germline validated no 584 .
srip127023 chr8 72399104 72399104 - unknown germline validated no 584 .
srip128036 chr8 83740734 83740734 + unknown germline validated no 584 .
srip128196 chr8 85428807 85428807 + unknown germline validated no 584 RALYL
srip128858 chr8 112121121 112121121 - unknown germline validated no 584 .
srip129025 chr8 115788352 115788352 - unknown germline validated no 584 .
srip130575 chr9 4265600 4265600 + unknown germline validated no 584 GLIS3
srip131163 chr9 7327229 7327229 - unknown germline validated no 584 .
srip131180 chr9 7426706 7426706 - unknown germline validated no 584 .
srip133888 chr9 70999188 70999188 + unknown germline validated no 584 PGM5
srip134159 chr9 82082611 82082611 - unknown germline validated no 584 .
srip135467 chr9 110018307 110018307 - unknown germline validated no 584 .
srip135598 chr9 111565179 111565179 + unknown germline validated no 584 .
srip136194 chrX 3878925 3878925 - unknown germline validated no 584 .
srip136369 chrX 11953283 11953283 - unknown germline validated yes 584 .
srip136391 chrX 14151668 14151668 - unknown germline validated no 584 .
srip136604 chrX 21300794 21300794 + unknown germline validated no 584 .
srip137362 chrX 55584934 55584934 - unknown germline validated no 584 .
srip137805 chrX 61870985 61870985 + unknown germline validated no 584 .
srip139799 chrX 98920814 98920814 - unknown germline validated no 584 LOC442459
srip140103 chrX 102363307 102363307 + unknown germline validated no 584 .
srip140313 chrX 111557667 111557667 - unknown germline validated no 584 ZCCHC16
srip140654 chrX 119892535 119892535 - unknown germline validated no 584 .
srip141169 chrX 124637032 124637032 - unknown germline validated no 584 .
srip141205 chrX 129525062 129525062 - unknown germline validated no 584 .
srip141577 chrX 136180970 136180970 - unknown germline validated no 584 .
srip142290 chrY 13490753 13490753 + unknown germline validated no 584 .
srip142338 chrY 13878782 13878782 + unknown germline validated no 584 .
srip142482 chrY 58980643 58980643 - unknown germline validated no 584 .