euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip137 chr1 24775512 24775512 + unknown germline validated no 583 NIPAL3
srip1957 chr1 79023145 79023145 + unknown germline validated no 583 .
srip2057 chr1 83609125 83609125 - unknown germline validated no 583 .
srip2885 chr1 102545056 102545056 - unknown germline validated no 583 .
srip3082 chr1 102569114 102569114 + unknown germline validated no 583 .
srip3639 chr1 114976882 114976882 - unknown germline validated no 583 TRIM33
srip4157 chr1 152443698 152443698 - unknown germline validated no 583 .
srip4637 chr1 165531706 165531706 - unknown germline validated no 583 LRRC52;LOC400794
srip5266 chr1 179575197 179575197 - unknown germline validated no 583 TDRD5
srip5850 chr1 192262162 192262162 - unknown germline validated no 583 .
srip7423 chr1 242496596 242496596 + unknown germline validated no 583 PLD5
srip7797 chr10 19065550 19065550 - unknown germline validated no 583 .
srip10470 chr10 91717532 91717532 - unknown germline validated no 583 .
srip11235 chr10 110453931 110453931 + unknown germline validated no 583 .
srip11984 chr10 133016641 133016641 - unknown germline validated no 583 TCERG1L
srip12000 chr10 133528481 133528481 - unknown germline validated no 583 .
srip12565 chr11 15380364 15380364 + unknown germline validated no 583 .
srip12650 chr11 19652293 19652293 - unknown germline validated no 583 NAV2
srip12956 chr11 26159927 26159927 - unknown germline validated no 583 .
srip13276 chr11 30180703 30180703 + unknown germline validated no 583 .
srip13924 chr11 37811369 37811369 + unknown germline validated no 583 .
srip15873 chr11 67599491 67599491 + unknown germline validated no 583 LOC100421859
srip15889 chr11 67777074 67777074 - unknown germline validated no 583 ALDH3B1
srip16481 chr11 83652293 83652293 - unknown germline validated no 583 DLG2
srip16820 chr11 91203062 91203062 - unknown germline validated no 583 .
srip17813 chr11 105479182 105479182 + unknown germline validated no 583 .
srip18286 chr11 114895734 114895734 + unknown germline validated no 583 .
srip18527 chr11 123241906 123241906 + unknown germline validated no 583 .
srip20427 chr12 25775766 25775766 - unknown germline validated no 583 IFLTD1
srip21116 chr12 34017161 34017161 - unknown germline validated no 583 .
srip21935 chr12 42637062 42637062 + unknown germline validated no 583 .
srip22838 chr12 48929157 48929157 + unknown germline validated no 583 .
srip24657 chr12 84965334 84965334 + unknown germline validated no 583 .
srip24931 chr12 85506395 85506395 + unknown germline validated no 583 LRRIQ1
srip25414 chr12 117814367 117814367 - unknown germline validated no 583 .
srip28023 chr13 42771428 42771428 + unknown germline validated no 583 DGKH
srip28500 chr13 61221023 61221023 - unknown germline validated no 583 .
srip35390 chr14 31150525 31150525 - unknown germline validated no 583 SCFD1
srip37069 chr14 51311482 51311482 - unknown germline validated no 583 .
srip37364 chr14 59220500 59220500 + unknown germline validated no 583 .
srip37685 chr14 67419610 67419610 - unknown germline validated no 583 GPHN
srip37956 chr14 68784350 68784350 + unknown germline validated no 583 RAD51B
srip38167 chr14 71197806 71197806 + unknown germline validated no 583 MAP3K9
srip38190 chr14 72333521 72333521 - unknown germline validated no 583 .
srip38422 chr14 86307570 86307570 + unknown germline validated no 583 .
srip38444 chr14 86381662 86381662 - unknown germline validated no 583 .
srip38836 chr14 90497183 90497183 - unknown germline validated no 583 TDP1
srip39108 chr15 25253952 25253952 - unknown germline validated no 583 SNRPN
srip39135 chr15 27875825 27875825 + unknown germline validated no 583 .
srip39586 chr15 35654003 35654003 - unknown germline validated no 583 .
srip39631 chr15 37707731 37707731 - unknown germline validated no 583 .
srip39907 chr15 45567581 45567581 - unknown germline validated no 583 SLC28A2
srip40691 chr15 51189570 51189570 + unknown germline validated no 583 .
srip40739 chr15 51843910 51843910 + unknown germline validated no 583 DMXL2
srip40962 chr15 53956368 53956368 + unknown germline validated no 583 WDR72
srip41261 chr15 56251651 56251651 + unknown germline validated no 583 NEDD4
srip41517 chr15 61328808 61328808 - unknown germline validated no 583 RORA
srip42626 chr15 85649502 85649502 + unknown germline validated no 583 PDE8A
srip43461 chr16 5338879 5338879 + unknown germline validated no 583 .
srip44042 chr16 16934247 16934247 - unknown germline validated no 583 .
srip44445 chr16 22945701 22945701 - unknown germline validated no 583 .
srip44791 chr16 32525376 32525376 - unknown germline validated no 583 .
srip45715 chr16 55292232 55292232 + unknown germline validated no 583 .
srip46473 chr16 89978226 89978226 + unknown germline validated no 583 .
srip47380 chr17 28398481 28398481 + unknown germline validated no 583 EFCAB5
srip47718 chr17 32813910 32813910 + unknown germline validated no 583 .
srip48098 chr17 64551116 64551116 - unknown germline validated no 583 PRKCA
srip48454 chr17 68357562 68357562 + unknown germline validated no 583 .
srip49860 chr18 49216083 49216083 - unknown germline validated no 583 .
srip51010 chr18 59579982 59579982 + unknown germline validated no 583 .
srip51411 chr18 69617399 69617399 + unknown germline validated no 583 .
srip52172 chr19 24602154 24602154 - unknown germline validated no 583 .
srip53164 chr2 22706685 22706685 + unknown germline validated no 583 .
srip53959 chr2 35879443 35879443 + unknown germline validated no 583 .
srip54948 chr2 53460161 53460161 + unknown germline validated no 583 .
srip56627 chr2 92306795 92306795 + unknown germline validated no 583 .
srip56649 chr2 92319432 92319432 - unknown germline validated no 583 .
srip56683 chr2 92324483 92324483 - unknown germline validated no 583 .
srip56790 chr2 106151450 106151450 - unknown germline validated no 583 .
srip56913 chr2 106163220 106163220 + unknown germline validated no 583 .
srip58395 chr2 143370703 143370703 - unknown germline validated no 583 .
srip58587 chr2 144010847 144010847 + unknown germline validated no 583 ARHGAP15
srip59717 chr2 168735299 168735299 - unknown germline validated no 583 .
srip61638 chr2 212707721 212707721 + unknown germline validated no 583 ERBB4
srip62371 chr2 230341968 230341968 + unknown germline validated no 583 DNER
srip62647 chr2 235519844 235519844 + unknown germline validated no 583 .
srip62746 chr20 6105791 6105791 - unknown germline validated no 583 .
srip63331 chr20 16479373 16479373 - unknown germline validated no 583 KIF16B
srip64142 chr20 29591676 29591676 + unknown germline validated no 583 .
srip64604 chr20 41951972 41951972 - unknown germline validated no 583 .
srip65642 chr21 19517214 19517214 - unknown germline validated no 583 .
srip67149 chr22 17246312 17246312 + unknown germline validated no 583 .
srip67249 chr22 19210951 19210951 + unknown germline validated no 583 CLTCL1
srip68587 chr22 44324380 44324380 - unknown germline validated no 583 PNPLA3
srip69824 chr3 3408404 3408404 + unknown germline validated no 583 .
srip70558 chr3 21235006 21235006 + unknown germline validated no 583 .
srip70648 chr3 22440113 22440113 + unknown germline validated no 583 .
srip71941 chr3 38626129 38626129 + unknown germline validated no 583 SCN5A
srip72052 chr3 44300491 44300491 - unknown germline validated no 583 C3orf77
srip72836 chr3 58783947 58783947 + unknown germline validated no 583 C3orf67
srip73494 chr3 65685575 65685575 + unknown germline validated no 583 MAGI1
srip73889 chr3 75670011 75670011 - unknown germline validated no 583 UNC93B3
srip73905 chr3 75691138 75691138 - unknown germline validated no 583 .
srip74057 chr3 79216420 79216420 + unknown germline validated no 583 ROBO1
srip74629 chr3 81990731 81990731 - unknown germline validated no 583 .
srip75624 chr3 85576631 85576631 + unknown germline validated no 583 CADM2
srip75964 chr3 90456520 90456520 - unknown germline validated no 583 .
srip76914 chr3 123033794 123033794 + unknown germline validated no 583 ADCY5
srip77299 chr3 123590896 123590896 + unknown germline validated no 583 MYLK
srip77508 chr3 131069981 131069981 + unknown germline validated no 583 LOC339874
srip78086 chr3 143121667 143121667 - unknown germline validated no 583 SLC9A9
srip78341 chr3 150210561 150210561 - unknown germline validated no 583 .
srip79284 chr3 161145847 161145847 + unknown germline validated no 583 RPL23AP42
srip79894 chr3 169270360 169270360 + unknown germline validated no 583 MECOM
srip81844 chr3 193354030 193354030 - unknown germline validated no 583 OPA1
srip83860 chr4 29322214 29322214 + unknown germline validated no 583 .
srip85477 chr4 58126491 58126491 - unknown germline validated no 583 .
srip85632 chr4 58917248 58917248 - unknown germline validated no 583 .
srip87046 chr4 71093393 71093393 + unknown germline validated no 583 C4orf7
srip87395 chr4 80768650 80768650 + unknown germline validated no 583 GDEP
srip89032 chr4 104214774 104214774 + unknown germline validated no 583 .
srip90360 chr4 115132827 115132827 + unknown germline validated no 583 .
srip91187 chr4 128965197 128965197 - unknown germline validated no 583 .
srip91518 chr4 132181331 132181331 - unknown germline validated no 583 .
srip93289 chr4 151582619 151582619 + unknown germline validated no 583 LRBA
srip93330 chr4 152732601 152732601 - unknown germline validated no 583 .
srip95400 chr4 190659942 190659942 + unknown germline validated no 583 .
srip96097 chr5 9055982 9055982 + unknown germline validated no 583 SEMA5A
srip96817 chr5 20458616 20458616 + unknown germline validated no 583 .
srip96995 chr5 23070279 23070279 + unknown germline validated no 583 .
srip97977 chr5 33797341 33797341 - unknown germline validated no 583 ADAMTS12
srip98398 chr5 41602121 41602121 + unknown germline validated no 583 .
srip99125 chr5 57428108 57428108 + unknown germline validated no 583 .
srip99149 chr5 59591041 59591041 + unknown germline validated no 583 PDE4D
srip99326 chr5 67721751 67721751 + unknown germline validated no 583 .
srip99618 chr5 68618005 68618005 - unknown germline validated no 583 .
srip102654 chr5 112449536 112449536 - unknown germline validated no 583 MCC
srip102902 chr5 124155264 124155264 - unknown germline validated no 583 .
srip103386 chr5 125040179 125040179 + unknown germline validated no 583 .
srip103564 chr5 132934117 132934117 + unknown germline validated no 583 FSTL4
srip104021 chr5 144233373 144233373 - unknown germline validated no 583 .
srip104038 chr5 144330739 144330739 - unknown germline validated no 583 .
srip104871 chr5 155333706 155333706 - unknown germline validated no 583 .
srip105294 chr5 157867170 157867170 - unknown germline validated no 583 .
srip105502 chr5 159351006 159351006 - unknown germline validated no 583 ADRA1B
srip106901 chr6 13135020 13135020 + unknown germline validated no 583 PHACTR1
srip107577 chr6 13503253 13503253 + unknown germline validated no 583 .
srip107644 chr6 18227737 18227737 + unknown germline validated no 583 DEK
srip108144 chr6 36498040 36498040 + unknown germline validated no 583 STK38
srip108355 chr6 45934271 45934271 + unknown germline validated no 583 CLIC5
srip108824 chr6 53285027 53285027 + unknown germline validated no 583 .
srip108963 chr6 56758359 56758359 - unknown germline validated no 583 LOC100652827
srip110336 chr6 73716580 73716580 + unknown germline validated no 583 KCNQ5
srip110574 chr6 77379855 77379855 - unknown germline validated no 583 .
srip111317 chr6 83678042 83678042 - unknown germline validated no 583 UBE2CBP
srip112852 chr6 108786737 108786737 - unknown germline validated no 583 LACE1
srip113435 chr6 125692148 125692148 - unknown germline validated no 583 .
srip113640 chr6 142449929 142449929 - unknown germline validated no 583 .
srip116437 chr7 22783334 22783334 + unknown germline validated no 583 .
srip116500 chr7 25081285 25081285 - unknown germline validated no 583 .
srip116608 chr7 26794974 26794974 + unknown germline validated no 583 SKAP2
srip116794 chr7 34440719 34440719 + unknown germline validated no 583 AAA1
srip118005 chr7 62178856 62178856 + unknown germline validated no 583 .
srip118355 chr7 66590847 66590847 - unknown germline validated no 583 TYW1
srip120393 chr7 88003097 88003097 - unknown germline validated no 583 .
srip121147 chr7 105968058 105968058 + unknown germline validated no 583 .
srip122645 chr7 122124598 122124598 + unknown germline validated no 583 CADPS2
srip123487 chr7 145115410 145115410 - unknown germline validated no 583 .
srip123732 chr7 155158659 155158659 - unknown germline validated no 583 .
srip124837 chr8 11731373 11731373 + unknown germline validated no 583 .
srip124965 chr8 18455923 18455923 + unknown germline validated yes 583 PSD3
srip125265 chr8 24926274 24926274 - unknown germline validated no 583 .
srip125724 chr8 40432892 40432892 - unknown germline validated no 583 ZMAT4
srip125831 chr8 43784668 43784668 + unknown germline validated no 583 .
srip126414 chr8 58348186 58348186 + unknown germline validated no 583 .
srip127022 chr8 72399104 72399104 - unknown germline validated no 583 .
srip128035 chr8 83740734 83740734 + unknown germline validated no 583 .
srip128195 chr8 85428807 85428807 + unknown germline validated no 583 RALYL
srip128857 chr8 112121121 112121121 - unknown germline validated no 583 .
srip129024 chr8 115788352 115788352 - unknown germline validated no 583 .
srip130574 chr9 4265600 4265600 + unknown germline validated no 583 GLIS3
srip131162 chr9 7327229 7327229 - unknown germline validated no 583 .
srip131179 chr9 7426706 7426706 - unknown germline validated no 583 .
srip133887 chr9 70999188 70999188 + unknown germline validated no 583 PGM5
srip134158 chr9 82082611 82082611 - unknown germline validated no 583 .
srip135466 chr9 110018307 110018307 - unknown germline validated no 583 .
srip135597 chr9 111565179 111565179 + unknown germline validated no 583 .
srip136193 chrX 3878925 3878925 - unknown germline validated no 583 .
srip136368 chrX 11953283 11953283 - unknown germline validated yes 583 .
srip136390 chrX 14151668 14151668 - unknown germline validated no 583 .
srip136603 chrX 21300794 21300794 + unknown germline validated no 583 .
srip137361 chrX 55584934 55584934 - unknown germline validated no 583 .
srip137804 chrX 61870985 61870985 + unknown germline validated no 583 .
srip139798 chrX 98920814 98920814 - unknown germline validated no 583 LOC442459
srip140102 chrX 102363307 102363307 + unknown germline validated no 583 .
srip140312 chrX 111557667 111557667 - unknown germline validated no 583 ZCCHC16
srip140653 chrX 119892535 119892535 - unknown germline validated no 583 .
srip141168 chrX 124637032 124637032 - unknown germline validated no 583 .
srip141204 chrX 129525062 129525062 - unknown germline validated no 583 .
srip141576 chrX 136180970 136180970 - unknown germline validated no 583 .
srip142289 chrY 13490753 13490753 + unknown germline validated no 583 .
srip142337 chrY 13878782 13878782 + unknown germline validated no 583 .
srip142481 chrY 58980643 58980643 - unknown germline validated no 583 .