euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip135 chr1 24775512 24775512 + unknown germline validated no 581 NIPAL3
srip1955 chr1 79023145 79023145 + unknown germline validated no 581 .
srip2055 chr1 83609125 83609125 - unknown germline validated no 581 .
srip2883 chr1 102545056 102545056 - unknown germline validated no 581 .
srip3080 chr1 102569114 102569114 + unknown germline validated no 581 .
srip3637 chr1 114976882 114976882 - unknown germline validated no 581 TRIM33
srip4155 chr1 152443698 152443698 - unknown germline validated no 581 .
srip4635 chr1 165531706 165531706 - unknown germline validated no 581 LRRC52;LOC400794
srip5264 chr1 179575197 179575197 - unknown germline validated no 581 TDRD5
srip5848 chr1 192262162 192262162 - unknown germline validated no 581 .
srip7421 chr1 242496596 242496596 + unknown germline validated no 581 PLD5
srip7795 chr10 19065550 19065550 - unknown germline validated no 581 .
srip10468 chr10 91717532 91717532 - unknown germline validated no 581 .
srip11233 chr10 110453931 110453931 + unknown germline validated no 581 .
srip11982 chr10 133016641 133016641 - unknown germline validated no 581 TCERG1L
srip11998 chr10 133528481 133528481 - unknown germline validated no 581 .
srip12563 chr11 15380364 15380364 + unknown germline validated no 581 .
srip12648 chr11 19652293 19652293 - unknown germline validated no 581 NAV2
srip12954 chr11 26159927 26159927 - unknown germline validated no 581 .
srip13274 chr11 30180703 30180703 + unknown germline validated no 581 .
srip13922 chr11 37811369 37811369 + unknown germline validated no 581 .
srip15871 chr11 67599491 67599491 + unknown germline validated no 581 LOC100421859
srip15887 chr11 67777074 67777074 - unknown germline validated no 581 ALDH3B1
srip16479 chr11 83652293 83652293 - unknown germline validated no 581 DLG2
srip16818 chr11 91203062 91203062 - unknown germline validated no 581 .
srip17811 chr11 105479182 105479182 + unknown germline validated no 581 .
srip18284 chr11 114895734 114895734 + unknown germline validated no 581 .
srip18525 chr11 123241906 123241906 + unknown germline validated no 581 .
srip20425 chr12 25775766 25775766 - unknown germline validated no 581 IFLTD1
srip21114 chr12 34017161 34017161 - unknown germline validated no 581 .
srip21933 chr12 42637062 42637062 + unknown germline validated no 581 .
srip22836 chr12 48929157 48929157 + unknown germline validated no 581 .
srip24655 chr12 84965334 84965334 + unknown germline validated no 581 .
srip24929 chr12 85506395 85506395 + unknown germline validated no 581 LRRIQ1
srip25412 chr12 117814367 117814367 - unknown germline validated no 581 .
srip28021 chr13 42771428 42771428 + unknown germline validated no 581 DGKH
srip28498 chr13 61221023 61221023 - unknown germline validated no 581 .
srip35388 chr14 31150525 31150525 - unknown germline validated no 581 SCFD1
srip37067 chr14 51311482 51311482 - unknown germline validated no 581 .
srip37362 chr14 59220500 59220500 + unknown germline validated no 581 .
srip37683 chr14 67419610 67419610 - unknown germline validated no 581 GPHN
srip37954 chr14 68784350 68784350 + unknown germline validated no 581 RAD51B
srip38165 chr14 71197806 71197806 + unknown germline validated no 581 MAP3K9
srip38188 chr14 72333521 72333521 - unknown germline validated no 581 .
srip38420 chr14 86307570 86307570 + unknown germline validated no 581 .
srip38442 chr14 86381662 86381662 - unknown germline validated no 581 .
srip38834 chr14 90497183 90497183 - unknown germline validated no 581 TDP1
srip39106 chr15 25253952 25253952 - unknown germline validated no 581 SNRPN
srip39133 chr15 27875825 27875825 + unknown germline validated no 581 .
srip39584 chr15 35654003 35654003 - unknown germline validated no 581 .
srip39629 chr15 37707731 37707731 - unknown germline validated no 581 .
srip39905 chr15 45567581 45567581 - unknown germline validated no 581 SLC28A2
srip40689 chr15 51189570 51189570 + unknown germline validated no 581 .
srip40737 chr15 51843910 51843910 + unknown germline validated no 581 DMXL2
srip40960 chr15 53956368 53956368 + unknown germline validated no 581 WDR72
srip41259 chr15 56251651 56251651 + unknown germline validated no 581 NEDD4
srip41515 chr15 61328808 61328808 - unknown germline validated no 581 RORA
srip42624 chr15 85649502 85649502 + unknown germline validated no 581 PDE8A
srip43459 chr16 5338879 5338879 + unknown germline validated no 581 .
srip44040 chr16 16934247 16934247 - unknown germline validated no 581 .
srip44443 chr16 22945701 22945701 - unknown germline validated no 581 .
srip44789 chr16 32525376 32525376 - unknown germline validated no 581 .
srip45713 chr16 55292232 55292232 + unknown germline validated no 581 .
srip46471 chr16 89978226 89978226 + unknown germline validated no 581 .
srip47378 chr17 28398481 28398481 + unknown germline validated no 581 EFCAB5
srip47716 chr17 32813910 32813910 + unknown germline validated no 581 .
srip48096 chr17 64551116 64551116 - unknown germline validated no 581 PRKCA
srip48452 chr17 68357562 68357562 + unknown germline validated no 581 .
srip49858 chr18 49216083 49216083 - unknown germline validated no 581 .
srip51008 chr18 59579982 59579982 + unknown germline validated no 581 .
srip51409 chr18 69617399 69617399 + unknown germline validated no 581 .
srip52170 chr19 24602154 24602154 - unknown germline validated no 581 .
srip53162 chr2 22706685 22706685 + unknown germline validated no 581 .
srip53957 chr2 35879443 35879443 + unknown germline validated no 581 .
srip54946 chr2 53460161 53460161 + unknown germline validated no 581 .
srip56625 chr2 92306795 92306795 + unknown germline validated no 581 .
srip56647 chr2 92319432 92319432 - unknown germline validated no 581 .
srip56681 chr2 92324483 92324483 - unknown germline validated no 581 .
srip56788 chr2 106151450 106151450 - unknown germline validated no 581 .
srip56911 chr2 106163220 106163220 + unknown germline validated no 581 .
srip58393 chr2 143370703 143370703 - unknown germline validated no 581 .
srip58585 chr2 144010847 144010847 + unknown germline validated no 581 ARHGAP15
srip59715 chr2 168735299 168735299 - unknown germline validated no 581 .
srip61636 chr2 212707721 212707721 + unknown germline validated no 581 ERBB4
srip62369 chr2 230341968 230341968 + unknown germline validated no 581 DNER
srip62645 chr2 235519844 235519844 + unknown germline validated no 581 .
srip62744 chr20 6105791 6105791 - unknown germline validated no 581 .
srip63329 chr20 16479373 16479373 - unknown germline validated no 581 KIF16B
srip64140 chr20 29591676 29591676 + unknown germline validated no 581 .
srip64602 chr20 41951972 41951972 - unknown germline validated no 581 .
srip65640 chr21 19517214 19517214 - unknown germline validated no 581 .
srip67147 chr22 17246312 17246312 + unknown germline validated no 581 .
srip67247 chr22 19210951 19210951 + unknown germline validated no 581 CLTCL1
srip68585 chr22 44324380 44324380 - unknown germline validated no 581 PNPLA3
srip69822 chr3 3408404 3408404 + unknown germline validated no 581 .
srip70556 chr3 21235006 21235006 + unknown germline validated no 581 .
srip70646 chr3 22440113 22440113 + unknown germline validated no 581 .
srip71939 chr3 38626129 38626129 + unknown germline validated no 581 SCN5A
srip72050 chr3 44300491 44300491 - unknown germline validated no 581 C3orf77
srip72834 chr3 58783947 58783947 + unknown germline validated no 581 C3orf67
srip73492 chr3 65685575 65685575 + unknown germline validated no 581 MAGI1
srip73887 chr3 75670011 75670011 - unknown germline validated no 581 UNC93B3
srip73903 chr3 75691138 75691138 - unknown germline validated no 581 .
srip74055 chr3 79216420 79216420 + unknown germline validated no 581 ROBO1
srip74627 chr3 81990731 81990731 - unknown germline validated no 581 .
srip75622 chr3 85576631 85576631 + unknown germline validated no 581 CADM2
srip75962 chr3 90456520 90456520 - unknown germline validated no 581 .
srip76912 chr3 123033794 123033794 + unknown germline validated no 581 ADCY5
srip77297 chr3 123590896 123590896 + unknown germline validated no 581 MYLK
srip77506 chr3 131069981 131069981 + unknown germline validated no 581 LOC339874
srip78084 chr3 143121667 143121667 - unknown germline validated no 581 SLC9A9
srip78339 chr3 150210561 150210561 - unknown germline validated no 581 .
srip79282 chr3 161145847 161145847 + unknown germline validated no 581 RPL23AP42
srip79892 chr3 169270360 169270360 + unknown germline validated no 581 MECOM
srip81842 chr3 193354030 193354030 - unknown germline validated no 581 OPA1
srip83858 chr4 29322214 29322214 + unknown germline validated no 581 .
srip85475 chr4 58126491 58126491 - unknown germline validated no 581 .
srip85630 chr4 58917248 58917248 - unknown germline validated no 581 .
srip87044 chr4 71093393 71093393 + unknown germline validated no 581 C4orf7
srip87393 chr4 80768650 80768650 + unknown germline validated no 581 GDEP
srip89030 chr4 104214774 104214774 + unknown germline validated no 581 .
srip90358 chr4 115132827 115132827 + unknown germline validated no 581 .
srip91185 chr4 128965197 128965197 - unknown germline validated no 581 .
srip91516 chr4 132181331 132181331 - unknown germline validated no 581 .
srip93287 chr4 151582619 151582619 + unknown germline validated no 581 LRBA
srip93328 chr4 152732601 152732601 - unknown germline validated no 581 .
srip95398 chr4 190659942 190659942 + unknown germline validated no 581 .
srip96095 chr5 9055982 9055982 + unknown germline validated no 581 SEMA5A
srip96815 chr5 20458616 20458616 + unknown germline validated no 581 .
srip96993 chr5 23070279 23070279 + unknown germline validated no 581 .
srip97975 chr5 33797341 33797341 - unknown germline validated no 581 ADAMTS12
srip98396 chr5 41602121 41602121 + unknown germline validated no 581 .
srip99123 chr5 57428108 57428108 + unknown germline validated no 581 .
srip99147 chr5 59591041 59591041 + unknown germline validated no 581 PDE4D
srip99324 chr5 67721751 67721751 + unknown germline validated no 581 .
srip99616 chr5 68618005 68618005 - unknown germline validated no 581 .
srip102652 chr5 112449536 112449536 - unknown germline validated no 581 MCC
srip102900 chr5 124155264 124155264 - unknown germline validated no 581 .
srip103384 chr5 125040179 125040179 + unknown germline validated no 581 .
srip103562 chr5 132934117 132934117 + unknown germline validated no 581 FSTL4
srip104019 chr5 144233373 144233373 - unknown germline validated no 581 .
srip104036 chr5 144330739 144330739 - unknown germline validated no 581 .
srip104869 chr5 155333706 155333706 - unknown germline validated no 581 .
srip105292 chr5 157867170 157867170 - unknown germline validated no 581 .
srip105500 chr5 159351006 159351006 - unknown germline validated no 581 ADRA1B
srip106899 chr6 13135020 13135020 + unknown germline validated no 581 PHACTR1
srip107575 chr6 13503253 13503253 + unknown germline validated no 581 .
srip107642 chr6 18227737 18227737 + unknown germline validated no 581 DEK
srip108142 chr6 36498040 36498040 + unknown germline validated no 581 STK38
srip108353 chr6 45934271 45934271 + unknown germline validated no 581 CLIC5
srip108822 chr6 53285027 53285027 + unknown germline validated no 581 .
srip108961 chr6 56758359 56758359 - unknown germline validated no 581 LOC100652827
srip110334 chr6 73716580 73716580 + unknown germline validated no 581 KCNQ5
srip110572 chr6 77379855 77379855 - unknown germline validated no 581 .
srip111315 chr6 83678042 83678042 - unknown germline validated no 581 UBE2CBP
srip112850 chr6 108786737 108786737 - unknown germline validated no 581 LACE1
srip113433 chr6 125692148 125692148 - unknown germline validated no 581 .
srip113638 chr6 142449929 142449929 - unknown germline validated no 581 .
srip116435 chr7 22783334 22783334 + unknown germline validated no 581 .
srip116498 chr7 25081285 25081285 - unknown germline validated no 581 .
srip116606 chr7 26794974 26794974 + unknown germline validated no 581 SKAP2
srip116792 chr7 34440719 34440719 + unknown germline validated no 581 AAA1
srip118003 chr7 62178856 62178856 + unknown germline validated no 581 .
srip118353 chr7 66590847 66590847 - unknown germline validated no 581 TYW1
srip120391 chr7 88003097 88003097 - unknown germline validated no 581 .
srip121145 chr7 105968058 105968058 + unknown germline validated no 581 .
srip122643 chr7 122124598 122124598 + unknown germline validated no 581 CADPS2
srip123485 chr7 145115410 145115410 - unknown germline validated no 581 .
srip123730 chr7 155158659 155158659 - unknown germline validated no 581 .
srip124835 chr8 11731373 11731373 + unknown germline validated no 581 .
srip124963 chr8 18455923 18455923 + unknown germline validated yes 581 PSD3
srip125263 chr8 24926274 24926274 - unknown germline validated no 581 .
srip125722 chr8 40432892 40432892 - unknown germline validated no 581 ZMAT4
srip125829 chr8 43784668 43784668 + unknown germline validated no 581 .
srip126412 chr8 58348186 58348186 + unknown germline validated no 581 .
srip127020 chr8 72399104 72399104 - unknown germline validated no 581 .
srip128033 chr8 83740734 83740734 + unknown germline validated no 581 .
srip128193 chr8 85428807 85428807 + unknown germline validated no 581 RALYL
srip128855 chr8 112121121 112121121 - unknown germline validated no 581 .
srip129022 chr8 115788352 115788352 - unknown germline validated no 581 .
srip130572 chr9 4265600 4265600 + unknown germline validated no 581 GLIS3
srip131160 chr9 7327229 7327229 - unknown germline validated no 581 .
srip131177 chr9 7426706 7426706 - unknown germline validated no 581 .
srip133885 chr9 70999188 70999188 + unknown germline validated no 581 PGM5
srip134156 chr9 82082611 82082611 - unknown germline validated no 581 .
srip135464 chr9 110018307 110018307 - unknown germline validated no 581 .
srip135595 chr9 111565179 111565179 + unknown germline validated no 581 .
srip136191 chrX 3878925 3878925 - unknown germline validated no 581 .
srip136366 chrX 11953283 11953283 - unknown germline validated yes 581 .
srip136388 chrX 14151668 14151668 - unknown germline validated no 581 .
srip136601 chrX 21300794 21300794 + unknown germline validated no 581 .
srip137359 chrX 55584934 55584934 - unknown germline validated no 581 .
srip137802 chrX 61870985 61870985 + unknown germline validated no 581 .
srip139796 chrX 98920814 98920814 - unknown germline validated no 581 LOC442459
srip140100 chrX 102363307 102363307 + unknown germline validated no 581 .
srip140310 chrX 111557667 111557667 - unknown germline validated no 581 ZCCHC16
srip140651 chrX 119892535 119892535 - unknown germline validated no 581 .
srip141166 chrX 124637032 124637032 - unknown germline validated no 581 .
srip141202 chrX 129525062 129525062 - unknown germline validated no 581 .
srip141574 chrX 136180970 136180970 - unknown germline validated no 581 .
srip142287 chrY 13490753 13490753 + unknown germline validated no 581 .
srip142335 chrY 13878782 13878782 + unknown germline validated no 581 .
srip142479 chrY 58980643 58980643 - unknown germline validated no 581 .