euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip134 chr1 24775512 24775512 + unknown germline validated no 580 NIPAL3
srip1954 chr1 79023145 79023145 + unknown germline validated no 580 .
srip2054 chr1 83609125 83609125 - unknown germline validated no 580 .
srip2882 chr1 102545056 102545056 - unknown germline validated no 580 .
srip3079 chr1 102569114 102569114 + unknown germline validated no 580 .
srip3636 chr1 114976882 114976882 - unknown germline validated no 580 TRIM33
srip4154 chr1 152443698 152443698 - unknown germline validated no 580 .
srip4634 chr1 165531706 165531706 - unknown germline validated no 580 LRRC52;LOC400794
srip5263 chr1 179575197 179575197 - unknown germline validated no 580 TDRD5
srip5847 chr1 192262162 192262162 - unknown germline validated no 580 .
srip7420 chr1 242496596 242496596 + unknown germline validated no 580 PLD5
srip7794 chr10 19065550 19065550 - unknown germline validated no 580 .
srip10467 chr10 91717532 91717532 - unknown germline validated no 580 .
srip11232 chr10 110453931 110453931 + unknown germline validated no 580 .
srip11981 chr10 133016641 133016641 - unknown germline validated no 580 TCERG1L
srip11997 chr10 133528481 133528481 - unknown germline validated no 580 .
srip12562 chr11 15380364 15380364 + unknown germline validated no 580 .
srip12647 chr11 19652293 19652293 - unknown germline validated no 580 NAV2
srip12953 chr11 26159927 26159927 - unknown germline validated no 580 .
srip13273 chr11 30180703 30180703 + unknown germline validated no 580 .
srip13921 chr11 37811369 37811369 + unknown germline validated no 580 .
srip15870 chr11 67599491 67599491 + unknown germline validated no 580 LOC100421859
srip15886 chr11 67777074 67777074 - unknown germline validated no 580 ALDH3B1
srip16478 chr11 83652293 83652293 - unknown germline validated no 580 DLG2
srip16817 chr11 91203062 91203062 - unknown germline validated no 580 .
srip17810 chr11 105479182 105479182 + unknown germline validated no 580 .
srip18283 chr11 114895734 114895734 + unknown germline validated no 580 .
srip18524 chr11 123241906 123241906 + unknown germline validated no 580 .
srip20424 chr12 25775766 25775766 - unknown germline validated no 580 IFLTD1
srip21113 chr12 34017161 34017161 - unknown germline validated no 580 .
srip21932 chr12 42637062 42637062 + unknown germline validated no 580 .
srip22835 chr12 48929157 48929157 + unknown germline validated no 580 .
srip24654 chr12 84965334 84965334 + unknown germline validated no 580 .
srip24928 chr12 85506395 85506395 + unknown germline validated no 580 LRRIQ1
srip25411 chr12 117814367 117814367 - unknown germline validated no 580 .
srip28020 chr13 42771428 42771428 + unknown germline validated no 580 DGKH
srip28497 chr13 61221023 61221023 - unknown germline validated no 580 .
srip35387 chr14 31150525 31150525 - unknown germline validated no 580 SCFD1
srip37066 chr14 51311482 51311482 - unknown germline validated no 580 .
srip37361 chr14 59220500 59220500 + unknown germline validated no 580 .
srip37682 chr14 67419610 67419610 - unknown germline validated no 580 GPHN
srip37953 chr14 68784350 68784350 + unknown germline validated no 580 RAD51B
srip38164 chr14 71197806 71197806 + unknown germline validated no 580 MAP3K9
srip38187 chr14 72333521 72333521 - unknown germline validated no 580 .
srip38419 chr14 86307570 86307570 + unknown germline validated no 580 .
srip38441 chr14 86381662 86381662 - unknown germline validated no 580 .
srip38833 chr14 90497183 90497183 - unknown germline validated no 580 TDP1
srip39105 chr15 25253952 25253952 - unknown germline validated no 580 SNRPN
srip39132 chr15 27875825 27875825 + unknown germline validated no 580 .
srip39583 chr15 35654003 35654003 - unknown germline validated no 580 .
srip39628 chr15 37707731 37707731 - unknown germline validated no 580 .
srip39904 chr15 45567581 45567581 - unknown germline validated no 580 SLC28A2
srip40688 chr15 51189570 51189570 + unknown germline validated no 580 .
srip40736 chr15 51843910 51843910 + unknown germline validated no 580 DMXL2
srip40959 chr15 53956368 53956368 + unknown germline validated no 580 WDR72
srip41258 chr15 56251651 56251651 + unknown germline validated no 580 NEDD4
srip41514 chr15 61328808 61328808 - unknown germline validated no 580 RORA
srip42623 chr15 85649502 85649502 + unknown germline validated no 580 PDE8A
srip43458 chr16 5338879 5338879 + unknown germline validated no 580 .
srip44039 chr16 16934247 16934247 - unknown germline validated no 580 .
srip44442 chr16 22945701 22945701 - unknown germline validated no 580 .
srip44788 chr16 32525376 32525376 - unknown germline validated no 580 .
srip45712 chr16 55292232 55292232 + unknown germline validated no 580 .
srip46470 chr16 89978226 89978226 + unknown germline validated no 580 .
srip47377 chr17 28398481 28398481 + unknown germline validated no 580 EFCAB5
srip47715 chr17 32813910 32813910 + unknown germline validated no 580 .
srip48095 chr17 64551116 64551116 - unknown germline validated no 580 PRKCA
srip48451 chr17 68357562 68357562 + unknown germline validated no 580 .
srip49857 chr18 49216083 49216083 - unknown germline validated no 580 .
srip51007 chr18 59579982 59579982 + unknown germline validated no 580 .
srip51408 chr18 69617399 69617399 + unknown germline validated no 580 .
srip52169 chr19 24602154 24602154 - unknown germline validated no 580 .
srip53161 chr2 22706685 22706685 + unknown germline validated no 580 .
srip53956 chr2 35879443 35879443 + unknown germline validated no 580 .
srip54945 chr2 53460161 53460161 + unknown germline validated no 580 .
srip56624 chr2 92306795 92306795 + unknown germline validated no 580 .
srip56646 chr2 92319432 92319432 - unknown germline validated no 580 .
srip56680 chr2 92324483 92324483 - unknown germline validated no 580 .
srip56787 chr2 106151450 106151450 - unknown germline validated no 580 .
srip56910 chr2 106163220 106163220 + unknown germline validated no 580 .
srip58392 chr2 143370703 143370703 - unknown germline validated no 580 .
srip58584 chr2 144010847 144010847 + unknown germline validated no 580 ARHGAP15
srip59714 chr2 168735299 168735299 - unknown germline validated no 580 .
srip61635 chr2 212707721 212707721 + unknown germline validated no 580 ERBB4
srip62368 chr2 230341968 230341968 + unknown germline validated no 580 DNER
srip62644 chr2 235519844 235519844 + unknown germline validated no 580 .
srip62743 chr20 6105791 6105791 - unknown germline validated no 580 .
srip63328 chr20 16479373 16479373 - unknown germline validated no 580 KIF16B
srip64139 chr20 29591676 29591676 + unknown germline validated no 580 .
srip64601 chr20 41951972 41951972 - unknown germline validated no 580 .
srip65639 chr21 19517214 19517214 - unknown germline validated no 580 .
srip67146 chr22 17246312 17246312 + unknown germline validated no 580 .
srip67246 chr22 19210951 19210951 + unknown germline validated no 580 CLTCL1
srip68584 chr22 44324380 44324380 - unknown germline validated no 580 PNPLA3
srip69821 chr3 3408404 3408404 + unknown germline validated no 580 .
srip70555 chr3 21235006 21235006 + unknown germline validated no 580 .
srip70645 chr3 22440113 22440113 + unknown germline validated no 580 .
srip71938 chr3 38626129 38626129 + unknown germline validated no 580 SCN5A
srip72049 chr3 44300491 44300491 - unknown germline validated no 580 C3orf77
srip72833 chr3 58783947 58783947 + unknown germline validated no 580 C3orf67
srip73491 chr3 65685575 65685575 + unknown germline validated no 580 MAGI1
srip73886 chr3 75670011 75670011 - unknown germline validated no 580 UNC93B3
srip73902 chr3 75691138 75691138 - unknown germline validated no 580 .
srip74054 chr3 79216420 79216420 + unknown germline validated no 580 ROBO1
srip74626 chr3 81990731 81990731 - unknown germline validated no 580 .
srip75621 chr3 85576631 85576631 + unknown germline validated no 580 CADM2
srip75961 chr3 90456520 90456520 - unknown germline validated no 580 .
srip76911 chr3 123033794 123033794 + unknown germline validated no 580 ADCY5
srip77296 chr3 123590896 123590896 + unknown germline validated no 580 MYLK
srip77505 chr3 131069981 131069981 + unknown germline validated no 580 LOC339874
srip78083 chr3 143121667 143121667 - unknown germline validated no 580 SLC9A9
srip78338 chr3 150210561 150210561 - unknown germline validated no 580 .
srip79281 chr3 161145847 161145847 + unknown germline validated no 580 RPL23AP42
srip79891 chr3 169270360 169270360 + unknown germline validated no 580 MECOM
srip81841 chr3 193354030 193354030 - unknown germline validated no 580 OPA1
srip83857 chr4 29322214 29322214 + unknown germline validated no 580 .
srip85474 chr4 58126491 58126491 - unknown germline validated no 580 .
srip85629 chr4 58917248 58917248 - unknown germline validated no 580 .
srip87043 chr4 71093393 71093393 + unknown germline validated no 580 C4orf7
srip87392 chr4 80768650 80768650 + unknown germline validated no 580 GDEP
srip89029 chr4 104214774 104214774 + unknown germline validated no 580 .
srip90357 chr4 115132827 115132827 + unknown germline validated no 580 .
srip91184 chr4 128965197 128965197 - unknown germline validated no 580 .
srip91515 chr4 132181331 132181331 - unknown germline validated no 580 .
srip93286 chr4 151582619 151582619 + unknown germline validated no 580 LRBA
srip93327 chr4 152732601 152732601 - unknown germline validated no 580 .
srip95397 chr4 190659942 190659942 + unknown germline validated no 580 .
srip96094 chr5 9055982 9055982 + unknown germline validated no 580 SEMA5A
srip96814 chr5 20458616 20458616 + unknown germline validated no 580 .
srip96992 chr5 23070279 23070279 + unknown germline validated no 580 .
srip97974 chr5 33797341 33797341 - unknown germline validated no 580 ADAMTS12
srip98395 chr5 41602121 41602121 + unknown germline validated no 580 .
srip99122 chr5 57428108 57428108 + unknown germline validated no 580 .
srip99146 chr5 59591041 59591041 + unknown germline validated no 580 PDE4D
srip99323 chr5 67721751 67721751 + unknown germline validated no 580 .
srip99615 chr5 68618005 68618005 - unknown germline validated no 580 .
srip102651 chr5 112449536 112449536 - unknown germline validated no 580 MCC
srip102899 chr5 124155264 124155264 - unknown germline validated no 580 .
srip103383 chr5 125040179 125040179 + unknown germline validated no 580 .
srip103561 chr5 132934117 132934117 + unknown germline validated no 580 FSTL4
srip104018 chr5 144233373 144233373 - unknown germline validated no 580 .
srip104035 chr5 144330739 144330739 - unknown germline validated no 580 .
srip104868 chr5 155333706 155333706 - unknown germline validated no 580 .
srip105291 chr5 157867170 157867170 - unknown germline validated no 580 .
srip105499 chr5 159351006 159351006 - unknown germline validated no 580 ADRA1B
srip106898 chr6 13135020 13135020 + unknown germline validated no 580 PHACTR1
srip107574 chr6 13503253 13503253 + unknown germline validated no 580 .
srip107641 chr6 18227737 18227737 + unknown germline validated no 580 DEK
srip108141 chr6 36498040 36498040 + unknown germline validated no 580 STK38
srip108352 chr6 45934271 45934271 + unknown germline validated no 580 CLIC5
srip108821 chr6 53285027 53285027 + unknown germline validated no 580 .
srip108960 chr6 56758359 56758359 - unknown germline validated no 580 LOC100652827
srip110333 chr6 73716580 73716580 + unknown germline validated no 580 KCNQ5
srip110571 chr6 77379855 77379855 - unknown germline validated no 580 .
srip111314 chr6 83678042 83678042 - unknown germline validated no 580 UBE2CBP
srip112849 chr6 108786737 108786737 - unknown germline validated no 580 LACE1
srip113432 chr6 125692148 125692148 - unknown germline validated no 580 .
srip113637 chr6 142449929 142449929 - unknown germline validated no 580 .
srip116434 chr7 22783334 22783334 + unknown germline validated no 580 .
srip116497 chr7 25081285 25081285 - unknown germline validated no 580 .
srip116605 chr7 26794974 26794974 + unknown germline validated no 580 SKAP2
srip116791 chr7 34440719 34440719 + unknown germline validated no 580 AAA1
srip118002 chr7 62178856 62178856 + unknown germline validated no 580 .
srip118352 chr7 66590847 66590847 - unknown germline validated no 580 TYW1
srip120390 chr7 88003097 88003097 - unknown germline validated no 580 .
srip121144 chr7 105968058 105968058 + unknown germline validated no 580 .
srip122642 chr7 122124598 122124598 + unknown germline validated no 580 CADPS2
srip123484 chr7 145115410 145115410 - unknown germline validated no 580 .
srip123729 chr7 155158659 155158659 - unknown germline validated no 580 .
srip124834 chr8 11731373 11731373 + unknown germline validated no 580 .
srip124962 chr8 18455923 18455923 + unknown germline validated yes 580 PSD3
srip125262 chr8 24926274 24926274 - unknown germline validated no 580 .
srip125721 chr8 40432892 40432892 - unknown germline validated no 580 ZMAT4
srip125828 chr8 43784668 43784668 + unknown germline validated no 580 .
srip126411 chr8 58348186 58348186 + unknown germline validated no 580 .
srip127019 chr8 72399104 72399104 - unknown germline validated no 580 .
srip128032 chr8 83740734 83740734 + unknown germline validated no 580 .
srip128192 chr8 85428807 85428807 + unknown germline validated no 580 RALYL
srip128854 chr8 112121121 112121121 - unknown germline validated no 580 .
srip129021 chr8 115788352 115788352 - unknown germline validated no 580 .
srip130571 chr9 4265600 4265600 + unknown germline validated no 580 GLIS3
srip131159 chr9 7327229 7327229 - unknown germline validated no 580 .
srip131176 chr9 7426706 7426706 - unknown germline validated no 580 .
srip133884 chr9 70999188 70999188 + unknown germline validated no 580 PGM5
srip134155 chr9 82082611 82082611 - unknown germline validated no 580 .
srip135463 chr9 110018307 110018307 - unknown germline validated no 580 .
srip135594 chr9 111565179 111565179 + unknown germline validated no 580 .
srip136190 chrX 3878925 3878925 - unknown germline validated no 580 .
srip136365 chrX 11953283 11953283 - unknown germline validated yes 580 .
srip136387 chrX 14151668 14151668 - unknown germline validated no 580 .
srip136600 chrX 21300794 21300794 + unknown germline validated no 580 .
srip137358 chrX 55584934 55584934 - unknown germline validated no 580 .
srip137801 chrX 61870985 61870985 + unknown germline validated no 580 .
srip139795 chrX 98920814 98920814 - unknown germline validated no 580 LOC442459
srip140099 chrX 102363307 102363307 + unknown germline validated no 580 .
srip140309 chrX 111557667 111557667 - unknown germline validated no 580 ZCCHC16
srip140650 chrX 119892535 119892535 - unknown germline validated no 580 .
srip141165 chrX 124637032 124637032 - unknown germline validated no 580 .
srip141201 chrX 129525062 129525062 - unknown germline validated no 580 .
srip141573 chrX 136180970 136180970 - unknown germline validated no 580 .
srip142286 chrY 13490753 13490753 + unknown germline validated no 580 .
srip142334 chrY 13878782 13878782 + unknown germline validated no 580 .
srip142478 chrY 58980643 58980643 - unknown germline validated no 580 .