euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

7 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip46840 chr17 18776467 18776467 - Ta-1 germline validated no 622 PRPSAP2
srip48987 chr18 15095262 15095262 - NC germline validated no 622 .
srip58667 chr2 144626224 144626224 + Ta-1 germline validated no 622 .
srip77472 chr3 131069767 131069767 + Ta-0 germline validated no 622 LOC339874
srip88155 chr4 98103819 98103819 - Ta-1 germline validated no 622 .
srip89616 chr4 110248332 110248332 - Ta-1 germline validated no 622 .
srip139493 chrX 94852552 94852552 - Ta-1 germline validated no 622 .