euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

49 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip3869 chr1 119553348 119553348 + unknown germline validated no 77 .
srip5131 chr1 169524869 169524869 + unknown germline validated no 77 F5
srip8876 chr10 53063099 53063099 - unknown germline . no 77 PRKG1
srip14625 chr11 48360716 48360716 - unknown germline validated no 77 .
srip18021 chr11 110377870 110377870 - unknown germline . no 77 .
srip18589 chr11 128367820 128367820 - unknown germline . no 77 ETS1
srip19020 chr11 134305630 134305630 - unknown germline validated no 77 .
srip19842 chr12 11219180 11219180 - unknown germline . no 77 PRH1-PRR4
srip23380 chr12 67559640 67559640 . unknown germline . no 77 .
srip26064 chr12 118186926 118186926 + unknown germline . no 77 KSR2
srip29013 chr13 61462331 61462331 - unknown germline validated no 77 .
srip29482 chr13 61734484 61734484 . unknown germline validated no 77 .
srip29685 chr13 63689180 63689180 - unknown germline . no 77 .
srip31932 chr13 86340149 86340149 - unknown germline validated no 77 .
srip36990 chr14 48117869 48117869 - unknown germline . no 77 MDGA2
srip38813 chr14 88415492 88415492 + unknown germline . no 77 GALC
srip49408 chr18 28732901 28732901 - unknown germline validated no 77 DSC1
srip53400 chr2 23190999 23190999 - unknown germline . no 77 .
srip53884 chr2 35879337 35879337 + unknown germline . no 77 .
srip56421 chr2 83188324 83188324 . unknown germline validated no 77 .
srip58304 chr2 142785301 142785301 + unknown germline . no 77 LRP1B
srip59050 chr2 147020924 147020924 + unknown germline validated no 77 .
srip60659 chr2 182886781 182886781 . unknown germline . no 77 PPP1R1C
srip61701 chr2 213558073 213558073 . unknown germline . no 77 .
srip64484 chr20 29638569 29638569 . unknown germline validated no 77 .
srip64821 chr20 41952105 41952105 - unknown germline . no 77 .
srip65311 chr20 60132814 60132814 . unknown germline . no 77 CDH4
srip67421 chr22 22486366 22486366 - unknown germline validated no 77 IGL@
srip72566 chr3 55788565 55788565 + unknown germline . no 77 ERC2
srip73267 chr3 59852887 59852887 + unknown germline . no 77 FHIT
srip74806 chr3 82144851 82144851 - unknown germline . no 77 .
srip81737 chr3 188234417 188234417 . unknown germline validated no 77 LPP
srip82034 chr3 193354159 193354159 - unknown germline . no 77 OPA1
srip87002 chr4 71093302 71093302 . unknown germline . no 77 C4orf7
srip91584 chr4 132181647 132181647 - unknown germline . no 77 .
srip92169 chr4 134596419 134596419 + unknown germline . no 77 .
srip97702 chr5 33633332 33633332 . unknown germline validated no 77 ADAMTS12
srip100554 chr5 89450768 89450768 + unknown germline validated no 77 .
srip104161 chr5 144330994 144330994 . unknown germline . no 77 .
srip111465 chr6 85947727 85947727 - unknown germline validated no 77 .
srip114997 chr6 157968609 157968609 . unknown germline validated no 77 ZDHHC14
srip115525 chr6 162181256 162181256 + unknown germline . no 77 PARK2
srip120721 chr7 93146610 93146610 - unknown germline . no 77 CALCR
srip121572 chr7 107829248 107829248 + unknown germline validated no 77 NRCAM
srip122212 chr7 110484748 110484748 + unknown germline . no 77 IMMP2L
srip125526 chr8 24926557 24926557 - unknown germline validated no 77 .
srip131306 chr9 7741395 7741395 + unknown germline . no 77 .
srip133566 chr9 32463896 32463896 - unknown germline validated no 77 DDX58
srip134483 chr9 94058480 94058480 - unknown germline . no 77 AUH