euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

61 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1150 chr1 60715697 60715697 - unknown germline . no 51 .
srip2031 chr1 81855786 81855786 + unknown germline . no 51 .
srip4718 chr1 165553135 165553135 - unknown germline validated no 51 .
srip5634 chr1 187441830 187441830 - unknown germline . no 51 .
srip8398 chr10 25707686 25707686 - unknown germline validated no 51 GPR158
srip8670 chr10 30771545 30771545 - unknown germline . no 51 .
srip9780 chr10 78996161 78996161 - unknown germline . no 51 KCNMA1
srip11336 chr10 112177768 112177768 + unknown germline . no 51 .
srip11915 chr10 127079390 127079390 - unknown germline . no 51 .
srip13190 chr11 28740024 28740024 + unknown germline . no 51 .
srip13191 chr11 28740024 28740024 + unknown germline . no 51 .
srip18223 chr11 112084610 112084610 + unknown germline . no 51 BCO2
srip18986 chr11 134305630 134305630 - unknown germline validated no 51 .
srip20115 chr12 12933683 12933683 - unknown germline validated no 51 APOLD1
srip20321 chr12 15617225 15617225 - unknown germline . no 51 PTPRO
srip21948 chr12 42813458 42813458 - unknown germline . no 51 PPHLN1
srip28089 chr13 48061501 48061501 + unknown germline . no 51 .
srip28979 chr13 61462331 61462331 - unknown germline validated no 51 .
srip30431 chr13 74613206 74613206 - unknown germline . no 51 KLF12
srip31546 chr13 85871603 85871603 - unknown germline . no 51 .
srip37124 chr14 52667757 52667757 - unknown germline . no 51 .
srip37408 chr14 60058962 60058962 - unknown germline . no 51 .
srip39461 chr15 34031838 34031838 - unknown germline validated no 51 RYR3
srip40155 chr15 47507328 47507328 - unknown germline validated no 51 SEMA6D
srip42511 chr15 83551623 83551623 - unknown germline validated no 51 HOMER2
srip43488 chr16 6793805 6793805 + unknown germline . no 51 RBFOX1
srip45031 chr16 32525610 32525610 - unknown germline . no 51 .
srip45315 chr16 33976999 33976999 - unknown germline . no 51 .
srip45709 chr16 55292007 55292007 + unknown germline validated no 51 .
srip46285 chr16 71028008 71028008 + unknown germline validated no 51 HYDIN
srip52373 chr19 35868831 35868831 - unknown germline . no 51 .
srip53385 chr2 23190999 23190999 - unknown germline . no 51 .
srip58509 chr2 144010778 144010778 + unknown germline validated no 51 ARHGAP15
srip59008 chr2 147020924 147020924 + unknown germline validated no 51 .
srip72144 chr3 47042302 47042302 - unknown germline . no 51 NBEAL2
srip75467 chr3 85576544 85576544 + unknown germline . no 51 CADM2
srip77333 chr3 127523596 127523596 - unknown germline . no 51 MGLL
srip77873 chr3 139044426 139044426 + unknown germline . no 51 .
srip78631 chr3 151148545 151148545 - unknown germline validated no 51 MED12L
srip87135 chr4 78916723 78916723 + unknown germline . no 51 .
srip88920 chr4 104214654 104214654 + unknown germline . no 51 .
srip89896 chr4 112628959 112628959 + unknown germline validated no 51 .
srip93959 chr4 162451667 162451667 + unknown germline . no 51 FSTL5
srip96886 chr5 21207716 21207716 + unknown germline . no 51 .
srip97673 chr5 33633332 33633332 . unknown germline validated no 51 ADAMTS12
srip103416 chr5 130563670 130563670 + unknown germline . no 51 .
srip104825 chr5 154506223 154506223 + unknown germline . no 51 .
srip105739 chr5 161058730 161058730 + unknown germline . no 51 .
srip109458 chr6 63368195 63368195 + unknown germline validated no 51 .
srip111798 chr6 90952996 90952996 - unknown germline . no 51 BACH2
srip111799 chr6 90952996 90952996 - unknown germline . no 51 BACH2
srip114372 chr6 148163569 148163569 + unknown germline validated no 51 .
srip119953 chr7 84901725 84901725 - unknown germline validated no 51 .
srip121537 chr7 107829248 107829248 + unknown germline validated no 51 NRCAM
srip125206 chr8 24569957 24569957 + unknown germline . no 51 .
srip127401 chr8 72399225 72399225 - unknown germline . no 51 .
srip130471 chr8 141527595 141527595 - unknown germline . no 51 .
srip131294 chr9 7741395 7741395 + unknown germline . no 51 .
srip134037 chr9 74904914 74904914 - unknown germline . no 51 .
srip136135 chr9 131340239 131340239 - unknown germline . no 51 SPTAN1
srip136795 chrX 29501264 29501264 + unknown germline . no 51 IL1RAPL1