euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

44 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip11813 chr10 124455218 124455218 + unknown germline . no 45 .
srip14197 chr11 41831797 41831797 . unknown germline validated no 45 .
srip14534 chr11 43356937 43356937 + unknown germline validated no 45 API5
srip18982 chr11 134305630 134305630 - unknown germline validated no 45 .
srip19869 chr12 11219180 11219180 - unknown germline . no 45 PRH1-PRR4
srip24584 chr12 84965133 84965133 + unknown germline validated no 45 .
srip24825 chr12 85506275 85506275 + unknown germline . no 45 LRRIQ1
srip26307 chr12 126802928 126802928 - unknown germline . no 45 .
srip27300 chr13 27488105 27488105 + unknown germline . no 45 .
srip28975 chr13 61462331 61462331 - unknown germline validated no 45 .
srip31543 chr13 85871603 85871603 - unknown germline . no 45 .
srip32362 chr13 91626218 91626218 + unknown germline validated no 45 .
srip35845 chr14 36674743 36674743 + unknown germline . no 45 .
srip39664 chr15 37707866 37707866 - unknown germline . no 45 .
srip48324 chr17 68357398 68357398 + unknown germline validated no 45 .
srip49389 chr18 28732901 28732901 - unknown germline validated no 45 DSC1
srip50384 chr18 51488315 51488315 - unknown germline validated no 45 .
srip59003 chr2 147020924 147020924 + unknown germline validated no 45 .
srip60073 chr2 178676244 178676244 - unknown germline validated no 45 PDE11A
srip61123 chr2 199779900 199779900 + unknown germline . no 45 .
srip72605 chr3 55788565 55788565 + unknown germline . no 45 ERC2
srip73233 chr3 59852887 59852887 + unknown germline . no 45 FHIT
srip82068 chr3 193354159 193354159 - unknown germline . no 45 OPA1
srip82431 chr4 12197191 12197191 + unknown germline . no 45 .
srip91578 chr4 132181647 132181647 - unknown germline . no 45 .
srip92142 chr4 134596419 134596419 + unknown germline . no 45 .
srip92616 chr4 138177324 138177324 + unknown germline validated no 45 .
srip93215 chr4 147953926 147953926 - unknown germline . no 45 .
srip93371 chr4 152732804 152732804 - unknown germline validated no 45 .
srip95314 chr4 190659694 190659694 . unknown germline . no 45 .
srip95916 chr5 8749509 8749509 . unknown germline . no 45 .
srip96282 chr5 11391262 11391262 + unknown germline . no 45 CTNND2
srip97668 chr5 33633332 33633332 . unknown germline validated no 45 ADAMTS12
srip98051 chr5 33797545 33797545 - unknown germline . no 45 ADAMTS12
srip111172 chr6 77980671 77980671 - unknown germline validated no 45 .
srip113251 chr6 123647637 123647637 . unknown germline . no 45 TRDN
srip114371 chr6 148163569 148163569 + unknown germline validated no 45 .
srip115516 chr6 162181256 162181256 + unknown germline . no 45 PARK2
srip116098 chr7 8019011 8019011 + unknown germline validated no 45 GLCCI1
srip121531 chr7 107829248 107829248 + unknown germline validated no 45 NRCAM
srip122574 chr7 119446559 119446559 - unknown germline . no 45 .
srip129371 chr8 115881769 115881769 + unknown germline . no 45 .
srip134467 chr9 94058480 94058480 - unknown germline . no 45 AUH
srip140418 chrX 111557749 111557749 - unknown germline validated no 45 ZCCHC16