euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

43 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip7950 chr10 19216651 19216651 . unknown germline . no 20 .
srip10560 chr10 91717633 91717633 - unknown germline . no 20 .
srip11801 chr10 124455218 124455218 + unknown germline . no 20 .
srip15328 chr11 58171837 58171837 + unknown germline . no 20 .
srip18959 chr11 134305630 134305630 - unknown germline validated no 20 .
srip19857 chr12 11219180 11219180 - unknown germline . no 20 PRH1-PRR4
srip24337 chr12 84955192 84955192 - unknown germline . no 20 .
srip24815 chr12 85506275 85506275 + unknown germline . no 20 LRRIQ1
srip26295 chr12 126802928 126802928 - unknown germline . no 20 .
srip27287 chr13 27488105 27488105 + unknown germline . no 20 .
srip31521 chr13 85871603 85871603 - unknown germline . no 20 .
srip31959 chr13 86340149 86340149 - unknown germline validated no 20 .
srip35828 chr14 36674743 36674743 + unknown germline . no 20 .
srip39457 chr15 34031838 34031838 - unknown germline validated no 20 RYR3
srip39652 chr15 37707866 37707866 - unknown germline . no 20 .
srip41579 chr15 61328958 61328958 - unknown germline . no 20 RORA
srip42491 chr15 83551623 83551623 - unknown germline validated no 20 HOMER2
srip50155 chr18 50097742 50097742 - unknown germline . no 20 DCC
srip56430 chr2 83188324 83188324 . unknown germline validated no 20 .
srip58977 chr2 147020924 147020924 + unknown germline validated no 20 .
srip64431 chr20 29638569 29638569 . unknown germline validated no 20 .
srip64836 chr20 41952105 41952105 - unknown germline . no 20 .
srip67396 chr22 22486366 22486366 - unknown germline validated no 20 IGL@
srip71041 chr3 26524446 26524446 - unknown germline . no 20 .
srip72587 chr3 55788565 55788565 + unknown germline . no 20 ERC2
srip73217 chr3 59852887 59852887 + unknown germline . no 20 FHIT
srip82426 chr4 12197191 12197191 + unknown germline . no 20 .
srip92600 chr4 138177324 138177324 + unknown germline validated no 20 .
srip95301 chr4 190659694 190659694 . unknown germline . no 20 .
srip97642 chr5 33633332 33633332 . unknown germline validated no 20 ADAMTS12
srip100443 chr5 89450768 89450768 + unknown germline validated no 20 .
srip111152 chr6 77980671 77980671 - unknown germline validated no 20 .
srip115498 chr6 162181256 162181256 + unknown germline . no 20 PARK2
srip117601 chr7 53652501 53652501 - unknown germline . no 20 .
srip119928 chr7 84901725 84901725 - unknown germline validated no 20 .
srip120106 chr7 85044736 85044736 . unknown germline validated no 20 .
srip121508 chr7 107829248 107829248 + unknown germline validated no 20 NRCAM
srip122133 chr7 110484748 110484748 + unknown germline . no 20 IMMP2L
srip125549 chr8 24926557 24926557 - unknown germline validated no 20 .
srip127380 chr8 72399225 72399225 - unknown germline . no 20 .
srip127550 chr8 75723721 75723721 . unknown germline . no 20 .
srip128132 chr8 85428606 85428606 + unknown germline . no 20 RALYL
srip136493 chrX 14152000 14152000 - unknown germline . no 20 .