euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

27 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip5123 chr1 169524869 169524869 + unknown germline validated no 125 F5
srip19837 chr12 11219180 11219180 - unknown germline . no 125 PRH1-PRR4
srip29001 chr13 61462331 61462331 - unknown germline validated no 125 .
srip35799 chr14 36674743 36674743 + unknown germline . no 125 .
srip36985 chr14 48117869 48117869 - unknown germline . no 125 MDGA2
srip46412 chr16 76900053 76900053 - unknown germline . no 125 .
srip64397 chr20 29638569 29638569 . unknown germline validated no 125 .
srip67416 chr22 22486366 22486366 - unknown germline validated no 125 IGL@
srip71054 chr3 26524446 26524446 - unknown germline . no 125 .
srip73258 chr3 59852887 59852887 + unknown germline . no 125 FHIT
srip73812 chr3 75101220 75101220 + unknown germline . no 125 .
srip74804 chr3 82144851 82144851 - unknown germline . no 125 .
srip82028 chr3 193354159 193354159 - unknown germline . no 125 OPA1
srip86992 chr4 71093302 71093302 . unknown germline . no 125 C4orf7
srip91287 chr4 130601379 130601379 . unknown germline validated no 125 .
srip92160 chr4 134596419 134596419 + unknown germline . no 125 .
srip92555 chr4 138177324 138177324 + unknown germline validated no 125 .
srip95928 chr5 8749509 8749509 . unknown germline . no 125 .
srip97692 chr5 33633332 33633332 . unknown germline validated no 125 ADAMTS12
srip100541 chr5 89450768 89450768 + unknown germline validated no 125 .
srip111109 chr6 77980671 77980671 - unknown germline validated no 125 .
srip115486 chr6 162181256 162181256 + unknown germline . no 125 PARK2
srip120128 chr7 85044736 85044736 . unknown germline validated no 125 .
srip121560 chr7 107829248 107829248 + unknown germline validated no 125 NRCAM
srip127354 chr8 72399225 72399225 - unknown germline . no 125 .
srip128139 chr8 85428606 85428606 + unknown germline . no 125 RALYL
srip133554 chr9 32463896 32463896 - unknown germline validated no 125 DDX58