euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

53 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip614 chr1 49428729 49428729 - unknown germline validated no 121 AGBL4
srip2371 chr1 90914497 90914497 + unknown germline . no 121 .
srip3862 chr1 119553348 119553348 + unknown germline validated no 121 .
srip10553 chr10 91717633 91717633 - unknown germline . no 121 .
srip13211 chr11 29463794 29463794 + unknown germline . no 121 .
srip14620 chr11 48360716 48360716 - unknown germline validated no 121 .
srip18009 chr11 110377870 110377870 - unknown germline . no 121 .
srip19006 chr11 134305630 134305630 - unknown germline validated no 121 .
srip19835 chr12 11219180 11219180 - unknown germline . no 121 PRH1-PRR4
srip21083 chr12 33630064 33630064 - unknown germline . no 121 .
srip26857 chr13 22489789 22489789 + unknown germline . no 121 .
srip27325 chr13 27488105 27488105 + unknown germline . no 121 .
srip28249 chr13 49957889 49957889 + unknown germline . no 121 CAB39L
srip28997 chr13 61462331 61462331 - unknown germline validated no 121 .
srip29729 chr13 64569837 64569837 . unknown germline . no 121 .
srip31460 chr13 85871603 85871603 - unknown germline . no 121 .
srip31924 chr13 86340149 86340149 - unknown germline validated no 121 .
srip32287 chr13 91149408 91149408 - unknown germline validated no 121 .
srip35796 chr14 36674743 36674743 + unknown germline . no 121 .
srip48337 chr17 68357398 68357398 + unknown germline validated no 121 .
srip49400 chr18 28732901 28732901 - unknown germline validated no 121 DSC1
srip52724 chr2 6798274 6798274 - unknown germline . no 121 .
srip58300 chr2 142785301 142785301 + unknown germline . no 121 LRP1B
srip59036 chr2 147020924 147020924 + unknown germline validated no 121 .
srip61698 chr2 213558073 213558073 . unknown germline . no 121 .
srip64393 chr20 29638569 29638569 . unknown germline validated no 121 .
srip67414 chr22 22486366 22486366 - unknown germline validated no 121 IGL@
srip71053 chr3 26524446 26524446 - unknown germline . no 121 .
srip73255 chr3 59852887 59852887 + unknown germline . no 121 FHIT
srip73808 chr3 75101220 75101220 + unknown germline . no 121 .
srip74803 chr3 82144851 82144851 - unknown germline . no 121 .
srip76004 chr3 95654406 95654406 + unknown germline . no 121 .
srip82025 chr3 193354159 193354159 - unknown germline . no 121 OPA1
srip82441 chr4 12197191 12197191 + unknown germline . no 121 .
srip82744 chr4 17456497 17456497 - unknown germline . no 121 .
srip83197 chr4 18194343 18194343 - unknown germline validated no 121 .
srip92156 chr4 134596419 134596419 + unknown germline . no 121 .
srip92553 chr4 138177324 138177324 + unknown germline validated no 121 .
srip93276 chr4 150798827 150798827 - unknown germline . no 121 .
srip96245 chr5 11391262 11391262 + unknown germline . no 121 CTNND2
srip97688 chr5 33633332 33633332 . unknown germline validated no 121 ADAMTS12
srip100538 chr5 89450768 89450768 + unknown germline validated no 121 .
srip101944 chr5 108914021 108914021 + unknown germline . no 121 .
srip104156 chr5 144330994 144330994 . unknown germline . no 121 .
srip108053 chr6 32589549 32589549 + unknown germline . no 121 .
srip110556 chr6 76637524 76637524 + unknown germline . no 121 IMPG1
srip111388 chr6 85298096 85298096 + unknown germline . no 121 .
srip121557 chr7 107829248 107829248 + unknown germline validated no 121 NRCAM
srip122199 chr7 110484748 110484748 + unknown germline . no 121 IMMP2L
srip134474 chr9 94058480 94058480 - unknown germline . no 121 AUH
srip134988 chr9 105073653 105073653 . unknown germline . no 121 .
srip136542 chrX 14434992 14434992 + unknown germline . no 121 .
srip137520 chrX 55585142 55585142 - unknown germline . no 121 .