euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

52 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip2370 chr1 90914497 90914497 + unknown germline . no 120 .
srip3861 chr1 119553348 119553348 + unknown germline validated no 120 .
srip6080 chr1 193778291 193778291 - unknown germline . no 120 .
srip11790 chr10 124455218 124455218 + unknown germline . no 120 .
srip14213 chr11 41831797 41831797 . unknown germline validated no 120 .
srip14619 chr11 48360716 48360716 - unknown germline validated no 120 .
srip18364 chr11 122300403 122300403 - unknown germline . no 120 .
srip19005 chr11 134305630 134305630 - unknown germline validated no 120 .
srip19834 chr12 11219180 11219180 - unknown germline . no 120 PRH1-PRR4
srip23951 chr12 79338020 79338020 - unknown germline . no 120 SYT1
srip24323 chr12 84955192 84955192 - unknown germline . no 120 .
srip26856 chr13 22489789 22489789 + unknown germline . no 120 .
srip28248 chr13 49957889 49957889 + unknown germline . no 120 CAB39L
srip28996 chr13 61462331 61462331 - unknown germline validated no 120 .
srip29471 chr13 61734484 61734484 . unknown germline validated no 120 .
srip31923 chr13 86340149 86340149 - unknown germline validated no 120 .
srip32286 chr13 91149408 91149408 - unknown germline validated no 120 .
srip58299 chr2 142785301 142785301 + unknown germline . no 120 LRP1B
srip59035 chr2 147020924 147020924 + unknown germline validated no 120 .
srip60046 chr2 178676244 178676244 - unknown germline validated no 120 PDE11A
srip62425 chr2 232482721 232482721 + unknown germline validated no 120 .
srip64392 chr20 29638569 29638569 . unknown germline validated no 120 .
srip64817 chr20 41952105 41952105 - unknown germline . no 120 .
srip71052 chr3 26524446 26524446 - unknown germline . no 120 .
srip73254 chr3 59852887 59852887 + unknown germline . no 120 FHIT
srip73807 chr3 75101220 75101220 + unknown germline . no 120 .
srip76003 chr3 95654406 95654406 + unknown germline . no 120 .
srip78306 chr3 146425134 146425134 - unknown germline . no 120 .
srip82440 chr4 12197191 12197191 + unknown germline . no 120 .
srip86990 chr4 71093302 71093302 . unknown germline . no 120 C4orf7
srip95925 chr5 8749509 8749509 . unknown germline . no 120 .
srip97687 chr5 33633332 33633332 . unknown germline validated no 120 ADAMTS12
srip100537 chr5 89450768 89450768 + unknown germline validated no 120 .
srip108299 chr6 45852710 45852710 - unknown germline . no 120 .
srip109462 chr6 63368195 63368195 + unknown germline validated no 120 .
srip111106 chr6 77980671 77980671 - unknown germline validated no 120 .
srip111456 chr6 85947727 85947727 - unknown germline validated no 120 .
srip114969 chr6 157968609 157968609 . unknown germline validated no 120 ZDHHC14
srip116423 chr7 21319590 21319590 - unknown germline . no 120 .
srip120126 chr7 85044736 85044736 . unknown germline validated no 120 .
srip120715 chr7 93146610 93146610 - unknown germline . no 120 CALCR
srip121556 chr7 107829248 107829248 + unknown germline validated no 120 NRCAM
srip122198 chr7 110484748 110484748 + unknown germline . no 120 IMMP2L
srip125519 chr8 24926557 24926557 - unknown germline validated no 120 .
srip129343 chr8 115881769 115881769 + unknown germline . no 120 .
srip132530 chr9 30674448 30674448 . unknown germline validated no 120 .
srip133552 chr9 32463896 32463896 - unknown germline validated no 120 DDX58
srip134473 chr9 94058480 94058480 - unknown germline . no 120 AUH
srip134987 chr9 105073653 105073653 . unknown germline . no 120 .
srip136541 chrX 14434992 14434992 + unknown germline . no 120 .
srip137519 chrX 55585142 55585142 - unknown germline . no 120 .
srip140406 chrX 111557749 111557749 - unknown germline validated no 120 ZCCHC16