euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

48 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip4722 chr1 165553135 165553135 - unknown germline validated no 102 .
srip5116 chr1 169524869 169524869 + unknown germline validated no 102 F5
srip10551 chr10 91717633 91717633 - unknown germline . no 102 .
srip14207 chr11 41831797 41831797 . unknown germline validated no 102 .
srip14615 chr11 48360716 48360716 - unknown germline validated no 102 .
srip14971 chr11 50399966 50399966 . unknown germline . no 102 .
srip18007 chr11 110377870 110377870 - unknown germline . no 102 .
srip18588 chr11 128367820 128367820 - unknown germline . no 102 ETS1
srip18997 chr11 134305630 134305630 - unknown germline validated no 102 .
srip26274 chr12 126802928 126802928 - unknown germline . no 102 .
srip27322 chr13 27488105 27488105 + unknown germline . no 102 .
srip28988 chr13 61462331 61462331 - unknown germline validated no 102 .
srip29470 chr13 61734484 61734484 . unknown germline validated no 102 .
srip31454 chr13 85871603 85871603 - unknown germline . no 102 .
srip35791 chr14 36674743 36674743 + unknown germline . no 102 .
srip48333 chr17 68357398 68357398 + unknown germline validated no 102 .
srip49394 chr18 28732901 28732901 - unknown germline validated no 102 DSC1
srip50101 chr18 49992147 49992147 - unknown germline . no 102 DCC
srip52723 chr2 6798274 6798274 - unknown germline . no 102 .
srip53391 chr2 23190999 23190999 - unknown germline . no 102 .
srip56850 chr2 106163159 106163159 + unknown germline . no 102 .
srip59028 chr2 147020924 147020924 + unknown germline validated no 102 .
srip60043 chr2 178676244 178676244 - unknown germline validated no 102 PDE11A
srip64372 chr20 29638569 29638569 . unknown germline validated no 102 .
srip71048 chr3 26524446 26524446 - unknown germline . no 102 .
srip72552 chr3 55788565 55788565 + unknown germline . no 102 ERC2
srip73246 chr3 59852887 59852887 + unknown germline . no 102 FHIT
srip73804 chr3 75101220 75101220 + unknown germline . no 102 .
srip81722 chr3 188234417 188234417 . unknown germline validated no 102 LPP
srip86986 chr4 71093302 71093302 . unknown germline . no 102 C4orf7
srip91583 chr4 132181647 132181647 - unknown germline . no 102 .
srip92149 chr4 134596419 134596419 + unknown germline . no 102 .
srip92548 chr4 138177324 138177324 + unknown germline validated no 102 .
srip97683 chr5 33633332 33633332 . unknown germline validated no 102 ADAMTS12
srip100529 chr5 89450768 89450768 + unknown germline validated no 102 .
srip101629 chr5 105935355 105935355 + unknown germline . no 102 .
srip104151 chr5 144330994 144330994 . unknown germline . no 102 .
srip108297 chr6 45852710 45852710 - unknown germline . no 102 .
srip114965 chr6 157968609 157968609 . unknown germline validated no 102 ZDHHC14
srip115480 chr6 162181256 162181256 + unknown germline . no 102 PARK2
srip121549 chr7 107829248 107829248 + unknown germline validated no 102 NRCAM
srip122190 chr7 110484748 110484748 + unknown germline . no 102 IMMP2L
srip127347 chr8 72399225 72399225 - unknown germline . no 102 .
srip129341 chr8 115881769 115881769 + unknown germline . no 102 .
srip133544 chr9 32463896 32463896 - unknown germline validated no 102 DDX58
srip134469 chr9 94058480 94058480 - unknown germline . no 102 AUH
srip134978 chr9 105073653 105073653 . unknown germline . no 102 .
srip139711 chrX 98264288 98264288 . unknown germline . no 102 .