euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

179 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1377 chr1 67544680 67544680 + unknown germline . yes 412 .
srip1744 chr1 75192881 75192881 - unknown germline . no 412 CRYZ
srip3489 chr1 111526302 111526302 - unknown germline . no 412 .
srip5721 chr1 189686334 189686334 + unknown germline . no 412 .
srip6623 chr1 220378213 220378213 - unknown germline . no 412 RAB3GAP2
srip7122 chr1 231079125 231079125 + unknown germline . no 412 TTC13
srip7884 chr10 19216642 19216642 + unknown germline . no 412 .
srip8075 chr10 23842031 23842031 - unknown germline . no 412 .
srip9180 chr10 66831656 66831656 - unknown germline . no 412 .
srip9315 chr10 67260458 67260458 + unknown germline . no 412 .
srip11686 chr10 124455206 124455206 + unknown germline . no 412 .
srip12436 chr11 15380235 15380235 + unknown germline . no 412 .
srip13135 chr11 28287509 28287509 + unknown germline . no 412 METTL15
srip13508 chr11 33670111 33670111 + unknown germline . no 412 C11orf41
srip15673 chr11 60364495 60364495 - unknown germline . no 412 .
srip16019 chr11 72760551 72760551 + unknown germline . no 412 FCHSD2
srip16964 chr11 94684350 94684350 + unknown germline . no 412 .
srip17573 chr11 104556111 104556111 - unknown germline . no 412 .
srip17799 chr11 104623569 104623569 + unknown germline . no 412 .
srip18795 chr11 134305626 134305626 - unknown germline . no 412 .
srip19445 chr12 5225709 5225709 + unknown germline . no 412 .
srip20017 chr12 12933660 12933660 - unknown germline . no 412 APOLD1
srip21245 chr12 34276519 34276519 - unknown germline . no 412 .
srip21426 chr12 34346159 34346159 + unknown germline . no 412 .
srip22656 chr12 47873142 47873142 + unknown germline . no 412 .
srip23244 chr12 66978550 66978550 + unknown germline . no 412 GRIP1
srip24477 chr12 84965122 84965122 + unknown germline . no 412 .
srip25471 chr12 117814427 117814427 - unknown germline . no 412 .
srip25725 chr12 118057334 118057334 - unknown germline . no 412 KSR2
srip26200 chr12 126802915 126802915 - unknown germline . no 412 .
srip26800 chr13 22489779 22489779 + unknown germline . no 412 .
srip27731 chr13 37724174 37724174 + unknown germline . no 412 .
srip27904 chr13 42771365 42771365 + unknown germline . no 412 DGKH
srip28113 chr13 48266680 48266680 + unknown germline . no 412 .
srip30064 chr13 67084854 67084854 - unknown germline . no 412 PCDH9
srip30785 chr13 79259770 79259770 - unknown germline . no 412 .
srip31763 chr13 86340132 86340132 - unknown germline . no 412 .
srip32134 chr13 88108003 88108003 - unknown germline . no 412 MIR4500HG
srip32604 chr13 96116756 96116756 - unknown germline . no 412 CLDN10
srip33318 chr13 104296211 104296211 - unknown germline . no 412 .
srip33913 chr13 106623455 106623455 - unknown germline . no 412 .
srip34711 chr14 28116812 28116812 + unknown germline . no 412 LOC728755
srip34946 chr14 28301203 28301203 + unknown germline . no 412 .
srip35679 chr14 36674732 36674732 + unknown germline . no 412 .
srip36097 chr14 38325535 38325535 + unknown germline . no 412 .
srip36856 chr14 46651945 46651945 - unknown germline . no 412 .
srip37482 chr14 60617378 60617378 - unknown germline . no 412 DHRS7
srip38513 chr14 86381784 86381784 - unknown germline . no 412 .
srip39699 chr15 37707869 37707869 - unknown germline . no 412 .
srip40035 chr15 47507319 47507319 - unknown germline . no 412 SEMA6D
srip40446 chr15 49652329 49652329 + unknown germline . no 412 C15orf33
srip41409 chr15 59794476 59794476 - unknown germline . no 412 FAM81A
srip41923 chr15 71388519 71388519 - unknown germline . no 412 .
srip42365 chr15 83551609 83551609 - unknown germline . no 412 HOMER2
srip42852 chr15 98051276 98051276 + unknown germline . no 412 .
srip43931 chr16 8542726 8542726 - unknown germline . no 412 .
srip44286 chr16 20365406 20365406 - unknown germline . no 412 .
srip44911 chr16 32525600 32525600 - unknown germline . no 412 .
srip46120 chr16 71027998 71027998 + unknown germline . no 412 HYDIN
srip49299 chr18 28732884 28732884 - unknown germline . no 412 DSC1
srip52242 chr19 27793326 27793326 - unknown germline . no 412 .
srip52605 chr2 3783028 3783028 - unknown germline . no 412 DCDC2C
srip53642 chr2 24796746 24796746 + unknown germline . no 412 .
srip53794 chr2 35879328 35879328 + unknown germline . no 412 .
srip54156 chr2 36570229 36570229 - unknown germline . no 412 .
srip55454 chr2 72413315 72413315 - unknown germline . no 412 EXOC6B
srip56370 chr2 83188313 83188313 + unknown germline . no 412 .
srip57127 chr2 108901173 108901173 - unknown germline . no 412 .
srip57687 chr2 129573941 129573941 + unknown germline . no 412 .
srip58069 chr2 141852873 141852873 - unknown germline . no 412 LRP1B
srip58807 chr2 147020911 147020911 + unknown germline . no 412 .
srip60261 chr2 179357273 179357273 + unknown germline . no 412 PLEKHA3
srip62906 chr20 6173654 6173654 + unknown germline . no 412 .
srip63145 chr20 9477902 9477902 - unknown germline . no 412 .
srip63793 chr20 21148878 21148878 - unknown germline . no 412 PLK1S1
srip64672 chr20 41952086 41952086 - unknown germline . no 412 .
srip65731 chr21 19517286 19517286 - unknown germline . no 412 .
srip67184 chr22 19210889 19210889 + unknown germline . no 412 CLTCL1
srip68046 chr22 29007687 29007687 - unknown germline . yes 412 TTC28
srip68380 chr22 41019372 41019372 - unknown germline . no 412 MKL1
srip68648 chr22 44324578 44324578 - unknown germline . no 412 PNPLA3
srip69935 chr3 5189072 5189072 - unknown germline . no 412 ARL8B
srip70222 chr3 19896236 19896236 - unknown germline . no 412 .
srip70703 chr3 24987849 24987849 - unknown germline . no 412 .
srip70973 chr3 26524436 26524436 - unknown germline . no 412 .
srip71529 chr3 36146939 36146939 - unknown germline . no 412 .
srip71760 chr3 38626054 38626054 + unknown germline . no 412 SCN5A
srip72261 chr3 55010457 55010457 + unknown germline . no 412 CACNA2D3
srip72442 chr3 55788556 55788556 + unknown germline . no 412 ERC2
srip72960 chr3 59852877 59852877 + unknown germline . no 412 FHIT
srip74000 chr3 79216288 79216288 + unknown germline . no 412 ROBO1
srip74346 chr3 80590146 80590146 - unknown germline . no 412 .
srip75395 chr3 85576539 85576539 + unknown germline . no 412 CADM2
srip77002 chr3 123590700 123590700 + unknown germline . no 412 MYLK
srip77677 chr3 134411227 134411227 - unknown germline . no 412 .
srip77980 chr3 139634686 139634686 - unknown germline . no 412 .
srip78456 chr3 151148531 151148531 - unknown germline . no 412 MED12L
srip79555 chr3 166764464 166764464 - unknown germline . no 412 .
srip79743 chr3 169269939 169269939 + unknown germline . no 412 MECOM
srip80565 chr3 180877922 180877922 + unknown germline . no 412 .
srip81048 chr3 184677979 184677979 - unknown germline . no 412 VPS8
srip82858 chr4 18162627 18162627 - unknown germline . no 412 .
srip87565 chr4 81242092 81242092 - unknown germline . no 412 .
srip88515 chr4 103043669 103043669 - unknown germline . no 412 .
srip88730 chr4 103343731 103343731 + unknown germline . no 412 .
srip89530 chr4 110248303 110248303 - unknown germline . no 412 .
srip89791 chr4 112628948 112628948 + unknown germline . no 412 .
srip90489 chr4 117153199 117153199 - unknown germline . no 412 .
srip90984 chr4 125208813 125208813 + unknown germline . no 412 .
srip91408 chr4 131551685 131551685 + unknown germline . no 412 .
srip91733 chr4 132357338 132357338 + unknown germline . no 412 .
srip91952 chr4 134596403 134596403 + unknown germline . no 412 .
srip93536 chr4 153061908 153061908 - unknown germline . no 412 .
srip93806 chr4 158907262 158907262 - unknown germline . no 412 .
srip94254 chr4 167476673 167476673 - unknown germline . no 412 .
srip94797 chr4 177308485 177308485 - unknown germline . no 412 .
srip95208 chr4 190659683 190659683 + unknown germline . no 412 .
srip95589 chr5 4621424 4621424 - unknown germline . no 412 .
srip96193 chr5 11391249 11391249 + unknown germline . no 412 CTNND2
srip96590 chr5 15913061 15913061 + unknown germline . no 412 FBXL7
srip97465 chr5 33633321 33633321 - unknown germline . no 412 ADAMTS12
srip99245 chr5 67191247 67191247 + unknown germline . no 412 .
srip99960 chr5 84239624 84239624 - unknown germline . no 412 .
srip100280 chr5 89450757 89450757 + unknown germline . no 412 .
srip101312 chr5 99234391 99234391 - unknown germline . no 412 .
srip103103 chr5 125012524 125012524 - unknown germline . no 412 .
srip103471 chr5 132934074 132934074 + unknown germline . no 412 FSTL4
srip106217 chr5 177401287 177401287 + unknown germline . no 412 .
srip106461 chr5 180329628 180329628 + unknown germline . no 412 BTNL8
srip108451 chr6 46310275 46310275 + unknown germline . no 412 .
srip109266 chr6 62482852 62482852 + unknown germline . no 412 KHDRBS2
srip109678 chr6 65105560 65105560 - unknown germline . no 412 EYS
srip110778 chr6 77980628 77980628 - unknown germline . no 412 .
srip111559 chr6 89122014 89122014 - unknown germline . no 412 .
srip112509 chr6 102283722 102283722 - unknown germline . no 412 GRIK2
srip112755 chr6 102846070 102846070 - unknown germline . no 412 .
srip113205 chr6 123647626 123647626 + unknown germline . no 412 TRDN
srip113300 chr6 123853924 123853924 - unknown germline . no 412 TRDN
srip113701 chr6 142450086 142450086 - unknown germline . no 412 .
srip114296 chr6 148163559 148163559 + unknown germline . no 412 .
srip114529 chr6 148195781 148195781 + unknown germline . no 412 .
srip115309 chr6 162181244 162181244 + unknown germline . no 412 PARK2
srip115910 chr6 163113050 163113050 - unknown germline . no 412 PARK2
srip118085 chr7 62492918 62492918 + unknown germline . no 412 .
srip118725 chr7 70188666 70188666 - unknown germline . no 412 AUTS2
srip119057 chr7 76919295 76919295 + unknown germline . no 412 CCDC146
srip119530 chr7 84901705 84901705 - unknown germline . no 412 .
srip120614 chr7 92680706 92680706 - unknown germline . no 412 .
srip121296 chr7 107829239 107829239 + unknown germline . no 412 NRCAM
srip122811 chr7 127603391 127603391 + unknown germline . no 412 SND1
srip123900 chr8 4345013 4345013 - unknown germline . no 412 CSMD1
srip124207 chr8 5829265 5829265 - unknown germline . no 412 .
srip124652 chr8 8334290 8334290 - unknown germline . yes 412 .
srip125331 chr8 24926529 24926529 - unknown germline . no 412 .
srip125752 chr8 40433163 40433163 - unknown germline . no 412 ZMAT4
srip126214 chr8 56620569 56620569 - unknown germline . no 412 .
srip126692 chr8 67381850 67381850 - unknown germline . no 412 .
srip127499 chr8 75723709 75723709 + unknown germline . no 412 .
srip129077 chr8 115788554 115788554 - unknown germline . no 412 .
srip129273 chr8 115881756 115881756 + unknown germline . no 412 .
srip129555 chr8 119721673 119721673 - unknown germline . no 412 SAMD12-AS1
srip129883 chr8 127744231 127744231 - unknown germline . no 412 .
srip133058 chr9 32463872 32463872 - unknown germline . no 412 DDX58
srip136437 chrX 14151990 14151990 - unknown germline . no 412 .
srip137296 chrX 55264607 55264607 - unknown germline . no 412 .
srip137420 chrX 55585135 55585135 - unknown germline . no 412 .
srip137712 chrX 58482468 58482468 - unknown germline . no 412 .
srip137879 chrX 62816726 62816726 + unknown germline . no 412 .
srip138165 chrX 63516573 63516573 + unknown germline . no 412 MTMR8
srip138879 chrX 75949527 75949527 - unknown germline . no 412 .
srip139661 chrX 98264276 98264276 - unknown germline . no 412 .
srip139886 chrX 101252237 101252237 + unknown germline . no 412 .
srip140002 chrX 102363162 102363162 + unknown germline . no 412 .
srip140208 chrX 108161889 108161889 - unknown germline . no 412 .
srip140266 chrX 111229543 111229543 - unknown germline . no 412 TRPC5
srip140699 chrX 119892816 119892816 - unknown germline . no 412 .
srip140942 chrX 120962306 120962306 - unknown germline . no 412 .
srip141293 chrX 129525256 129525256 - unknown germline . no 412 .
srip141878 chrX 140515246 140515246 - unknown germline . no 412 .