euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

53 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip2374 chr1 90914497 90914497 + unknown germline . no 126 .
srip3865 chr1 119553348 119553348 + unknown germline validated no 126 .
srip5124 chr1 169524869 169524869 + unknown germline validated no 126 F5
srip10554 chr10 91717633 91717633 - unknown germline . no 126 .
srip14216 chr11 41831797 41831797 . unknown germline validated no 126 .
srip18012 chr11 110377870 110377870 - unknown germline . no 126 .
srip18367 chr11 122300403 122300403 - unknown germline . no 126 .
srip19009 chr11 134305630 134305630 - unknown germline validated no 126 .
srip23953 chr12 79338020 79338020 - unknown germline . no 126 SYT1
srip26858 chr13 22489789 22489789 + unknown germline . no 126 .
srip28657 chr13 61221175 61221175 - unknown germline validated no 126 .
srip29002 chr13 61462331 61462331 - unknown germline validated no 126 .
srip29473 chr13 61734484 61734484 . unknown germline validated no 126 .
srip31462 chr13 85871603 85871603 - unknown germline . no 126 .
srip35800 chr14 36674743 36674743 + unknown germline . no 126 .
srip39669 chr15 37707866 37707866 - unknown germline . no 126 .
srip48338 chr17 68357398 68357398 + unknown germline validated no 126 .
srip54735 chr2 46002074 46002074 . unknown germline . no 126 PRKCE
srip58678 chr2 145039404 145039404 - unknown germline . no 126 GTDC1
srip59040 chr2 147020924 147020924 + unknown germline validated no 126 .
srip62426 chr2 232482721 232482721 + unknown germline validated no 126 .
srip64398 chr20 29638569 29638569 . unknown germline validated no 126 .
srip71055 chr3 26524446 26524446 - unknown germline . no 126 .
srip72559 chr3 55788565 55788565 + unknown germline . no 126 ERC2
srip73259 chr3 59852887 59852887 + unknown germline . no 126 FHIT
srip73813 chr3 75101220 75101220 + unknown germline . no 126 .
srip74993 chr3 84433383 84433383 + unknown germline . no 126 .
srip75807 chr3 86264938 86264938 . unknown germline . no 126 .
srip76008 chr3 95654406 95654406 + unknown germline . no 126 .
srip82029 chr3 193354159 193354159 - unknown germline . no 126 OPA1
srip82442 chr4 12197191 12197191 + unknown germline . no 126 .
srip82747 chr4 17456497 17456497 - unknown germline . no 126 .
srip92161 chr4 134596419 134596419 + unknown germline . no 126 .
srip92556 chr4 138177324 138177324 + unknown germline validated no 126 .
srip93279 chr4 150798827 150798827 - unknown germline . no 126 .
srip95268 chr4 190659694 190659694 . unknown germline . no 126 .
srip95929 chr5 8749509 8749509 . unknown germline . no 126 .
srip97693 chr5 33633332 33633332 . unknown germline validated no 126 ADAMTS12
srip100542 chr5 89450768 89450768 + unknown germline validated no 126 .
srip101947 chr5 108914021 108914021 + unknown germline . no 126 .
srip109465 chr6 63368195 63368195 + unknown germline validated no 126 .
srip111459 chr6 85947727 85947727 - unknown germline validated no 126 .
srip115487 chr6 162181256 162181256 + unknown germline . no 126 PARK2
srip121561 chr7 107829248 107829248 + unknown germline validated no 126 NRCAM
srip122203 chr7 110484748 110484748 + unknown germline . no 126 IMMP2L
srip125521 chr8 24926557 24926557 - unknown germline validated no 126 .
srip127546 chr8 75723721 75723721 . unknown germline . no 126 .
srip132531 chr9 30674448 30674448 . unknown germline validated no 126 .
srip133555 chr9 32463896 32463896 - unknown germline validated no 126 DDX58
srip134991 chr9 105073653 105073653 . unknown germline . no 126 .
srip136545 chrX 14434992 14434992 + unknown germline . no 126 .
srip137523 chrX 55585142 55585142 - unknown germline . no 126 .
srip139430 chrX 85781782 85781782 . unknown germline . no 126 DACH2