euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

156 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip601 chr1 46069049 46069049 - unknown germline . no 54 NASP
srip622 chr1 49428729 49428729 - unknown germline validated no 54 AGBL4
srip2032 chr1 81855786 81855786 + unknown germline . no 54 .
srip2680 chr1 101814586 101814586 + unknown germline . no 54 .
srip4006 chr1 121485210 121485210 - unknown germline . no 54 .
srip5257 chr1 177271967 177271967 + unknown germline . no 54 .
srip6085 chr1 193778291 193778291 - unknown germline . no 54 .
srip8400 chr10 25707686 25707686 - unknown germline validated no 54 GPR158
srip9707 chr10 77055944 77055944 + unknown germline . no 54 .
srip10059 chr10 87426248 87426248 + unknown germline . no 54 GRID1
srip10684 chr10 99496300 99496300 - unknown germline . no 54 .
srip10736 chr10 105680586 105680586 + unknown germline . no 54 .
srip11816 chr10 124455218 124455218 + unknown germline . no 54 .
srip13221 chr11 29463794 29463794 + unknown germline . no 54 .
srip14201 chr11 41831797 41831797 . unknown germline validated no 54 .
srip14591 chr11 48360716 48360716 - unknown germline validated no 54 .
srip15337 chr11 58171837 58171837 + unknown germline . no 54 .
srip17987 chr11 110377870 110377870 - unknown germline . no 54 .
srip18384 chr11 122300403 122300403 - unknown germline . no 54 .
srip18988 chr11 134305630 134305630 - unknown germline validated no 54 .
srip19338 chr12 1893941 1893941 - unknown germline . no 54 ADIPOR2
srip19872 chr12 11219180 11219180 - unknown germline . no 54 PRH1-PRR4
srip20117 chr12 12933683 12933683 - unknown germline validated no 54 APOLD1
srip20868 chr12 31353750 31353750 - unknown germline . no 54 OVOS2
srip22413 chr12 43487973 43487973 - unknown germline . no 54 .
srip23520 chr12 72507530 72507530 + unknown germline . no 54 .
srip25544 chr12 117814446 117814446 - unknown germline . no 54 .
srip26313 chr12 126802928 126802928 - unknown germline . no 54 .
srip28181 chr13 48856542 48856542 + unknown germline . no 54 .
srip28264 chr13 49957889 49957889 + unknown germline . no 54 CAB39L
srip28395 chr13 58515502 58515502 + unknown germline . no 54 .
srip28982 chr13 61462331 61462331 - unknown germline validated no 54 .
srip29465 chr13 61734484 61734484 . unknown germline validated no 54 .
srip30954 chr13 79259787 79259787 - unknown germline validated no 54 .
srip31549 chr13 85871603 85871603 - unknown germline . no 54 .
srip31972 chr13 86340149 86340149 - unknown germline validated no 54 .
srip32274 chr13 91149408 91149408 - unknown germline validated no 54 .
srip32363 chr13 91626218 91626218 + unknown germline validated no 54 .
srip33032 chr13 100811262 100811262 - unknown germline . no 54 PCCA
srip34265 chr13 114048712 114048712 - unknown germline . no 54 .
srip34364 chr14 23097270 23097270 - unknown germline . no 54 .
srip35848 chr14 36674743 36674743 + unknown germline . no 54 .
srip37126 chr14 52667757 52667757 - unknown germline . no 54 .
srip37292 chr14 59220381 59220381 + unknown germline . no 54 .
srip39463 chr15 34031838 34031838 - unknown germline validated no 54 RYR3
srip39666 chr15 37707866 37707866 - unknown germline . no 54 .
srip43421 chr15 101345004 101345004 - unknown germline . no 54 .
srip43489 chr16 6793805 6793805 + unknown germline . no 54 RBFOX1
srip44464 chr16 24981914 24981914 + unknown germline . no 54 ARHGAP17
srip44539 chr16 27910328 27910328 - unknown germline . no 54 GSG1L
srip45034 chr16 32525610 32525610 - unknown germline . no 54 .
srip45318 chr16 33976999 33976999 - unknown germline . no 54 .
srip45461 chr16 33992423 33992423 - unknown germline . no 54 .
srip45710 chr16 55292007 55292007 + unknown germline validated no 54 .
srip46287 chr16 71028008 71028008 + unknown germline validated no 54 HYDIN
srip46418 chr16 76900053 76900053 - unknown germline . no 54 .
srip47517 chr17 32584322 32584322 - unknown germline . no 54 .
srip48153 chr17 64637281 64637281 + unknown germline . no 54 PRKCA
srip48328 chr17 68357398 68357398 + unknown germline validated no 54 .
srip48677 chr18 5082706 5082706 + unknown germline . no 54 .
srip49846 chr18 47849810 47849810 - unknown germline . no 54 .
srip52039 chr19 18096056 18096056 + unknown germline . no 54 KCNN1
srip53106 chr2 20838931 20838931 + unknown germline . no 54 HS1BP3
srip53139 chr2 22706317 22706317 . unknown germline . no 54 .
srip53387 chr2 23190999 23190999 - unknown germline . no 54 .
srip53895 chr2 35879337 35879337 + unknown germline . no 54 .
srip54770 chr2 50334091 50334091 - unknown germline . no 54 NRXN1
srip54899 chr2 53460050 53460050 + unknown germline . no 54 .
srip57943 chr2 138245633 138245633 + unknown germline . no 54 THSD7B
srip58605 chr2 144304966 144304966 - unknown germline . no 54 ARHGAP15
srip59009 chr2 147020924 147020924 + unknown germline validated no 54 .
srip60079 chr2 178676244 178676244 - unknown germline validated no 54 PDE11A
srip60700 chr2 187938498 187938498 - unknown germline . no 54 .
srip61558 chr2 212312050 212312050 - unknown germline . no 54 ERBB4
srip61625 chr2 212707185 212707185 . unknown germline . no 54 ERBB4
srip64076 chr20 26094318 26094318 - unknown germline . no 54 NCOR1P1
srip64459 chr20 29638569 29638569 . unknown germline validated no 54 .
srip64854 chr20 41952105 41952105 - unknown germline . no 54 .
srip65358 chr21 10743291 10743291 - unknown germline . no 54 .
srip65840 chr21 19517298 19517298 - unknown germline validated no 54 .
srip67134 chr21 47333205 47333205 + unknown germline . no 54 PCBP3
srip68733 chr22 44324589 44324589 - unknown germline . no 54 PNPLA3
srip70727 chr3 24987857 24987857 - unknown germline . no 54 .
srip71892 chr3 38626065 38626065 + unknown germline . no 54 SCN5A
srip72614 chr3 55788565 55788565 + unknown germline . no 54 ERC2
srip73239 chr3 59852887 59852887 + unknown germline . no 54 FHIT
srip73488 chr3 64650968 64650968 - unknown germline . no 54 ADAMTS9
srip75027 chr3 84433383 84433383 + unknown germline . no 54 .
srip75468 chr3 85576544 85576544 + unknown germline . no 54 CADM2
srip78633 chr3 151148545 151148545 - unknown germline validated no 54 MED12L
srip78854 chr3 152145700 152145700 + unknown germline . no 54 MBNL1
srip81368 chr3 186372121 186372121 + unknown germline . no 54 .
srip81572 chr3 187835296 187835296 - unknown germline . no 54 .
srip82072 chr3 193354159 193354159 - unknown germline . no 54 OPA1
srip82434 chr4 12197191 12197191 + unknown germline . no 54 .
srip82740 chr4 17456497 17456497 - unknown germline . no 54 .
srip83363 chr4 20246383 20246383 + unknown germline . no 54 .
srip87108 chr4 74272267 74272267 + unknown germline . no 54 ALB
srip87873 chr4 86607949 86607949 + unknown germline . no 54 ARHGAP24
srip88922 chr4 104214654 104214654 + unknown germline . no 54 .
srip91579 chr4 132181647 132181647 - unknown germline . no 54 .
srip92620 chr4 138177324 138177324 + unknown germline validated no 54 .
srip92949 chr4 147225282 147225282 + unknown germline validated no 54 SLC10A7
srip93303 chr4 151689681 151689681 - unknown germline . no 54 LRBA
srip95316 chr4 190659694 190659694 . unknown germline . no 54 .
srip95917 chr5 8749509 8749509 . unknown germline . no 54 .
srip96145 chr5 10201733 10201733 + unknown germline validated no 54 .
srip96888 chr5 21207716 21207716 + unknown germline . no 54 .
srip97674 chr5 33633332 33633332 . unknown germline validated no 54 ADAMTS12
srip98052 chr5 33797545 33797545 - unknown germline . no 54 ADAMTS12
srip100148 chr5 88555046 88555046 + unknown germline . no 54 .
srip100476 chr5 89450768 89450768 + unknown germline validated no 54 .
srip100812 chr5 90422879 90422879 - unknown germline . no 54 GPR98
srip102641 chr5 111805027 111805027 . unknown germline . no 54 .
srip102875 chr5 121512133 121512133 + unknown germline . no 54 LOC100505841
srip106715 chr6 7713059 7713059 + unknown germline . no 54 .
srip106721 chr6 8583657 8583657 + unknown germline . no 54 LOC100506207
srip107031 chr6 13191015 13191015 + unknown germline validated no 54 PHACTR1
srip107350 chr6 13503035 13503035 + unknown germline . no 54 .
srip107618 chr6 16950839 16950839 - unknown germline . no 54 .
srip108244 chr6 42482301 42482301 - unknown germline . no 54 .
srip108324 chr6 45852710 45852710 - unknown germline . no 54 .
srip110702 chr6 77980621 77980621 . unknown germline . no 54 .
srip111176 chr6 77980671 77980671 - unknown germline validated no 54 .
srip112793 chr6 102846085 102846085 - unknown germline . no 54 .
srip113254 chr6 123647637 123647637 . unknown germline . no 54 TRDN
srip113333 chr6 123853935 123853935 - unknown germline validated no 54 TRDN
srip114746 chr6 148195789 148195789 + unknown germline . no 54 .
srip114857 chr6 154043924 154043924 - unknown germline . no 54 .
srip115047 chr6 157968715 157968715 - unknown germline validated no 54 ZDHHC14
srip115519 chr6 162181256 162181256 + unknown germline . no 54 PARK2
srip116100 chr7 8019011 8019011 + unknown germline validated no 54 GLCCI1
srip116821 chr7 40085368 40085368 - unknown germline . no 54 CDK13
srip117012 chr7 42529865 42529865 - unknown germline . no 54 .
srip117451 chr7 52789453 52789453 + unknown germline . no 54 .
srip117609 chr7 53652501 53652501 - unknown germline . no 54 .
srip118346 chr7 65893148 65893148 - unknown germline . no 54 .
srip119955 chr7 84901725 84901725 - unknown germline validated no 54 .
srip120118 chr7 85044736 85044736 . unknown germline validated no 54 .
srip121540 chr7 107829248 107829248 + unknown germline validated no 54 NRCAM
srip121993 chr7 108325666 108325666 + unknown germline . no 54 .
srip122153 chr7 110484748 110484748 + unknown germline . no 54 IMMP2L
srip124057 chr8 4452896 4452896 - unknown germline validated no 54 CSMD1
srip127960 chr8 83740678 83740678 . unknown germline . no 54 .
srip128436 chr8 92186231 92186231 - unknown germline . no 54 LRRC69
srip130111 chr8 131041219 131041219 + unknown germline . no 54 .
srip133535 chr9 32463896 32463896 - unknown germline validated no 54 DDX58
srip134396 chr9 93240845 93240845 + unknown germline . no 54 LOC340515
srip134528 chr9 94416757 94416757 - unknown germline validated no 54 .
srip134627 chr9 100675533 100675533 - unknown germline . no 54 C9orf156
srip135614 chr9 112395127 112395127 + unknown germline . no 54 .
srip136496 chrX 14152000 14152000 - unknown germline . no 54 .
srip140419 chrX 111557749 111557749 - unknown germline validated no 54 ZCCHC16
srip140759 chrX 119892832 119892832 - unknown germline . no 54 .
srip142162 chrX 154790162 154790162 + unknown germline . no 54 TMLHE
srip142233 chrY 9954600 9954600 + unknown germline . no 54 .