euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT
   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments
ID Chromosome Start Stop Strand SubFamily Lineage PCR SamplesID Reference GeneName
srip12 chr1 5733841 5733841 - unknown germline . 264 no .
srip13 chr1 5733841 5733841 . unknown germline . 258 no .
srip21 chr1 8580824 8580824 . unknown germline . 225 no RERE
srip22 chr1 8665913 8665913 - unknown germline . 238 no RERE
srip23 chr1 9141337 9141337 + unknown germline . 237 no SLC2A5
srip24 chr1 9141337 9141337 . unknown germline . 239 no SLC2A5
srip65 chr1 14552604 14552604 . unknown germline . 231 no .
srip76 chr1 17229436 17229436 . unknown germline . 237 no .
srip77 chr1 17229436 17229436 . unknown germline . 269 no .
srip78 chr1 17229447 17229447 . unknown germline . 262 no .
srip79 chr1 17229454 17229454 . unknown germline . 233 no .
srip80 chr1 17229461 17229461 . unknown germline . 219 no .
srip81 chr1 17229468 17229468 - unknown germline . 260 no .
srip82 chr1 17229472 17229472 - unknown germline . 236 no .
srip100 chr1 18080834 18080834 - unknown germline . 269 no .
srip101 chr1 18320281 18320281 - L1-Ta germline . 212 no .
srip103 chr1 20996377 20996377 + unknown germline . 219 no KIF17
srip130 chr1 24775170 24775170 + unknown germline . 235 no NIPAL3
srip131 chr1 24775171 24775171 + unknown germline . 236 no NIPAL3
srip132 chr1 24775171 24775171 + unknown germline . 219 no NIPAL3
srip133 chr1 24775171 24775171 + unknown germline . 231 no NIPAL3
srip154 chr1 28515499 28515499 . unknown germline . 231 no PTAFR
srip202 chr1 32004332 32004332 - unknown germline . 236 no .
srip315 chr1 35992790 35992790 - unknown germline . 269 no KIAA0319L
srip326 chr1 40380194 40380194 - unknown germline . 246 no .
srip327 chr1 40380197 40380197 - unknown germline . 222 no .
srip328 chr1 40380202 40380202 - unknown germline . 247 no .
srip356 chr1 41502718 41502718 + unknown germline validated 268 no LOC100507178;SCMH1
srip357 chr1 41502718 41502718 + unknown germline validated 267 no LOC100507178;SCMH1
srip468 chr1 42483959 42483959 + unknown germline . 237 no HIVEP3
srip545 chr1 42483964 42483964 + unknown germline . 219 no HIVEP3
srip546 chr1 42483965 42483965 + unknown germline . 238 no HIVEP3
srip547 chr1 42483965 42483965 + unknown germline . 225 no HIVEP3
srip548 chr1 42483965 42483965 + unknown germline . 229 no HIVEP3
srip549 chr1 42483965 42483965 + unknown germline . 226 no HIVEP3
srip550 chr1 42483967 42483967 + unknown germline . 254 no HIVEP3
srip551 chr1 42483967 42483967 + unknown germline . 228 no HIVEP3
srip552 chr1 42483967 42483967 + unknown germline . 234 no HIVEP3
srip563 chr1 43174819 43174819 . unknown germline . 222 no .
srip602 chr1 46453454 46453454 - unknown germline . 239 no MAST2



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Rows 1 - 40 (Total Result = 7610 records)