euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT
   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments
ID Chromosome Start Stop Strand SubFamily Lineage PCR SamplesID Reference GeneName
srip3 chr1 980069 980069 + L1-Ta germline . 617 no AGRN
srip4 chr1 1149273 1149273 - L1-pre-Ta germline . 617 no TNFRSF4
srip5 chr1 1687509 1687509 - L1-Ta germline . 617 no NADK
srip6 chr1 3053277 3053277 - L1-Ta germline . 617 no PRDM16
srip8 chr1 3508012 3508012 - L1-Ta somatic validated 615 no MEGF6
srip10 chr1 4833918 4833918 + L1-Ta germline . 617 no AJAP1
srip11 chr1 4884791 4884791 + L1-Ta germline . 617 no .
srip14 chr1 5890941 5890941 - L1-Ta germline . 617 no .
srip15 chr1 6942642 6942642 + L1-Ta germline . 617 no CAMTA1
srip16 chr1 7326736 7326736 + L1-Ta germline . 617 no CAMTA1
srip17 chr1 7948390 7948390 - L1-Ta germline . 617 no .
srip18 chr1 8248500 8248500 + L1-Ta germline . 617 no .
srip25 chr1 9717836 9717836 + L1-pre-Ta germline . 617 no PIK3CD
srip26 chr1 10059894 10059894 - L1-Ta germline . 617 no RBP7
srip29 chr1 10533748 10533748 + L1-Ta germline . 617 no .
srip30 chr1 10724778 10724778 - L1-Ta germline . 617 no CASZ1
srip38 chr1 11405058 11405058 + L1-Ta germline . 617 no .
srip71 chr1 14903286 14903286 + L1-Ta germline . 617 no .
srip75 chr1 16458133 16458133 + L1-Ta germline . 617 no EPHA2
srip97 chr1 17754089 17754089 + L1-Ta somatic validated 615 no RCC2
srip108 chr1 23136634 23136634 + L1-Ta germline . 617 no EPHB2
srip115 chr1 24019383 24019383 - L1-Ta germline . 617 no RPL11
srip116 chr1 24423681 24423681 + L1-pre-Ta germline . 617 no MYOM3
srip162 chr1 30303003 30303003 + L1-pre-Ta germline . 617 no .
srip165 chr1 30436317 30436317 + L1-Ta germline . 617 no .
srip201 chr1 31078338 31078338 + L1-pre-Ta germline . 617 no .
srip247 chr1 32355496 32355496 - L1-Ta germline . 617 no .
srip251 chr1 32796632 32796632 - L1-Ta somatic validated 616 no HDAC1
srip256 chr1 33350239 33350239 + L1-Ta germline . 617 no .
srip289 chr1 35333250 35333250 + L1-pre-Ta germline . 617 no DLGAP3
srip318 chr1 37232152 37232152 - L1-Ta germline . 617 no .
srip319 chr1 38177683 38177683 - L1-Ta germline . 617 no .
srip320 chr1 38199686 38199686 - L1-Ta germline . 617 no EPHA10
srip321 chr1 38654034 38654034 + L1-Ta germline . 617 no .
srip325 chr1 40342081 40342081 + L1-Ta germline . 615 no TRIT1
srip329 chr1 40982658 40982658 + L1-Ta germline . 617 no .
srip330 chr1 41131777 41131777 - L1-Ta germline . 617 no .
srip366 chr1 42035692 42035692 + L1-Ta germline . 617 no HIVEP3
srip567 chr1 43444592 43444592 - L1-Ta germline . 617 no FLJ32224
srip599 chr1 45084711 45084711 + L1-pre-Ta germline . 617 no RNF220



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Rows 1 - 40 (Total Result = 1569 records)