euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

204 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip63 chr1 14163093 14163093 + L1-Ta germline . no 205 .
srip128 chr1 24775164 24775164 + L1-Ta germline . no 205 NIPAL3
srip518 chr1 42483961 42483961 + L1-Ta germline . no 205 HIVEP3
srip1166 chr1 62930369 62930369 + L1-Ta germline . no 205 DOCK7
srip1928 chr1 75192907 75192907 - L1-Ta germline validated no 205 CRYZ
srip2014 chr1 81855783 81855783 + L1-Ta germline . no 205 .
srip2613 chr1 99685014 99685014 - L1-Ta germline . no 205 .
srip3077 chr1 102568923 102568923 + L1-Ta germline . no 205 .
srip3625 chr1 114046370 114046370 + L1-Ta germline . no 205 MAGI3
srip3929 chr1 121354774 121354774 + L1-Ta germline . no 205 .
srip5415 chr1 179575362 179575362 - L1-Ta germline . no 205 TDRD5
srip6021 chr1 192262268 192262268 - L1-Ta germline . no 205 .
srip6378 chr1 207579511 207579511 + L1-Ta germline . no 205 .
srip7821 chr10 19065785 19065785 - L1-Ta germline . no 205 .
srip8431 chr10 25707687 25707687 - L1-Ta germline . no 205 GPR158
srip8650 chr10 27775762 27775762 + L1-Ta germline . no 205 .
srip9694 chr10 74767506 74767506 - L1-Ta germline . no 205 P4HA1
srip11860 chr10 124455231 124455231 + L1-Ta germline . no 205 .
srip12870 chr11 25123354 25123354 - L1-Ta germline . no 205 .
srip13797 chr11 33670123 33670123 + L1-Ta germline . no 205 C11orf41
srip14565 chr11 43356955 43356955 + L1-Ta germline . no 205 API5
srip14770 chr11 48360753 48360753 - L1-Ta germline . no 205 .
srip15360 chr11 58171838 58171838 + L1-Ta germline . no 205 .
srip17771 chr11 104556130 104556130 - L1-Ta germline . no 205 .
srip18044 chr11 110377879 110377879 - L1-Ta germline . no 205 .
srip20156 chr12 12933694 12933694 - L1-Ta germline . no 205 APOLD1
srip20462 chr12 25775841 25775841 - L1-Ta germline . no 205 IFLTD1
srip20723 chr12 28226413 28226413 - L1-Ta germline . no 205 .
srip20976 chr12 33325793 33325793 - L1-Ta germline . no 205 .
srip21164 chr12 34017325 34017325 - L1-Ta germline . no 205 .
srip22264 chr12 43256986 43256986 - L1-Ta germline . no 205 .
srip22799 chr12 48841806 48841806 + L1-Ta germline validated no 205 .
srip24027 chr12 79338037 79338037 - L1-Ta germline . no 205 SYT1
srip24434 chr12 84955216 84955216 - L1-Ta germline . no 205 .
srip24921 chr12 85506290 85506290 + L1-Ta germline . no 205 LRRIQ1
srip25144 chr12 95808527 95808527 - L1-Ta germline . no 205 .
srip25644 chr12 117814447 117814447 - L1-Ta germline . no 205 .
srip26010 chr12 118186926 118186926 + L1-Ta germline . no 205 KSR2
srip26359 chr12 126802929 126802929 - L1-Ta germline . no 205 .
srip27016 chr13 22489805 22489805 + L1-Ta germline . no 205 .
srip27487 chr13 27488126 27488126 + L1-Ta germline . no 205 .
srip28018 chr13 42771403 42771403 + L1-Ta germline . no 205 DGKH
srip28173 chr13 48856541 48856541 + L1-Ta germline . no 205 .
srip29224 chr13 61681801 61681801 - L1-Ta germline . no 205 .
srip31032 chr13 79259793 79259793 - L1-Ta germline . no 205 .
srip32018 chr13 86340153 86340153 - L1-Ta germline . no 205 .
srip32310 chr13 91149409 91149409 - L1-Ta germline . no 205 .
srip33507 chr13 104296223 104296223 - L1-Ta germline . no 205 .
srip33664 chr13 104395943 104395943 - L1-Ta germline . no 205 .
srip33806 chr13 105280146 105280146 - L1-Ta germline . no 205 .
srip34459 chr14 24992912 24992912 - L1-Ta germline . no 205 .
srip35257 chr14 28301261 28301261 + L1-Ta germline . no 205 .
srip36041 chr14 36674760 36674760 + L1-Ta germline . no 205 .
srip36298 chr14 39875084 39875084 + L1-Ta germline . no 205 FBXO33
srip36421 chr14 41669665 41669665 - L1-Ta germline . no 205 .
srip37161 chr14 52667758 52667758 - L1-Ta germline . no 205 .
srip38615 chr14 86381796 86381796 - L1-Ta germline . no 205 .
srip39005 chr15 20116653 20116653 + L1-Ta germline . no 205 .
srip39754 chr15 37707890 37707890 - L1-Ta germline . no 205 .
srip42614 chr15 85140909 85140909 + L1-Ta germline . no 205 .
srip43408 chr15 100931161 100931161 - L1-Ta germline . no 205 .
srip44784 chr16 32523893 32523893 - L1-Ta germline . no 205 .
srip45069 chr16 32525611 32525611 - L1-Ta germline . no 205 .
srip45491 chr16 33992430 33992430 + L1-Ta germline . no 205 .
srip45884 chr16 61079188 61079188 + L1-Ta germline . no 205 .
srip46552 chr17 6341644 6341644 - L1-Ta germline . no 205 .
srip47369 chr17 28398313 28398313 + L1-Ta germline . no 205 EFCAB5
srip47591 chr17 32813605 32813605 + L1-Ta germline . no 205 .
srip48166 chr17 64637294 64637294 + L1-Ta germline . no 205 PRKCA
srip49070 chr18 25797181 25797181 + L1-Ta germline . no 205 .
srip50011 chr18 49216219 49216219 - L1-Ta germline . no 205 .
srip50350 chr18 51425726 51425726 - L1-Ta germline . no 205 .
srip50410 chr18 51488332 51488332 - L1-Ta germline . no 205 .
srip50724 chr18 51762730 51762730 - L1-Ta germline . no 205 .
srip50927 chr18 59466375 59466375 + L1-Ta germline . no 205 .
srip53443 chr2 23191000 23191000 - L1-Ta germline . no 205 .
srip54226 chr2 36570243 36570243 - L1-Ta germline . no 205 .
srip54605 chr2 42051403 42051403 + L1-Ta germline . no 205 .
srip55226 chr2 68049223 68049223 - L1-Ta germline . no 205 .
srip56248 chr2 82098043 82098043 + L1-Ta germline . no 205 .
srip57577 chr2 126064563 126064563 + L1-Ta germline . no 205 .
srip57670 chr2 129372166 129372166 + L1-Ta germline . no 205 .
srip57824 chr2 132868182 132868182 - L1-Ta germline . no 205 .
srip59608 chr2 156527822 156527822 + L1-Ta germline . no 205 .
srip60805 chr2 191478714 191478714 - L1-Ta germline . no 205 .
srip62174 chr2 221503768 221503768 - L1-Ta germline . no 205 .
srip62623 chr2 235519794 235519794 + L1-Ta germline . no 205 .
srip64014 chr20 25844027 25844027 + L1-Ta germline . no 205 .
srip64803 chr20 41952105 41952105 - L1-Ta germline . no 205 .
srip66041 chr21 19517313 19517313 - L1-Ta germline . no 205 .
srip66269 chr21 23626191 23626191 - L1-Ta germline . no 205 .
srip66879 chr21 29069171 29069171 + L1-Ta germline . no 205 .
srip68903 chr22 44324605 44324605 - L1-Ta germline . no 205 PNPLA3
srip69645 chr3 656435 656435 - L1-Ta germline . no 205 .
srip70083 chr3 17409573 17409573 - L1-Ta germline . no 205 TBC1D5
srip70451 chr3 20748896 20748896 - L1-Ta germline . no 205 .
srip70666 chr3 23253691 23253691 - L1-Ta germline . no 205 UBE2E2
srip71171 chr3 26524464 26524464 - L1-Ta germline . no 205 .
srip71931 chr3 38626082 38626082 + L1-Ta germline . no 205 SCN5A
srip72752 chr3 55788580 55788580 + L1-Ta germline . no 205 ERC2
srip73422 chr3 59852903 59852903 + L1-Ta germline . no 205 FHIT
srip73784 chr3 75101216 75101216 + L1-Ta germline . no 205 .
srip74432 chr3 80590163 80590163 - L1-Ta germline . no 205 .
srip75614 chr3 85576568 85576568 + L1-Ta germline . no 205 CADM2
srip75911 chr3 89022346 89022346 - L1-Ta germline . no 205 .
srip76447 chr3 105316337 105316337 + L1-Ta germline . no 205 .
srip76625 chr3 109751770 109751770 + L1-Ta germline . no 205 .
srip76702 chr3 111275065 111275065 + L1-Ta germline . no 205 CD96
srip76823 chr3 119046413 119046413 + L1-Ta germline . no 205 ARHGAP31
srip77290 chr3 123590726 123590726 + L1-Ta germline . no 205 MYLK
srip78613 chr3 151148544 151148544 - L1-Ta germline . no 205 MED12L
srip79889 chr3 169269964 169269964 + L1-Ta germline . no 205 MECOM
srip80409 chr3 176091333 176091333 + L1-Ta germline . no 205 .
srip81531 chr3 186372141 186372141 + L1-Ta germline . no 205 .
srip81659 chr3 187835309 187835309 - L1-Ta germline . no 205 .
srip83358 chr4 20246382 20246382 + L1-Ta germline . no 205 .
srip86206 chr4 66413932 66413932 + L1-Ta germline . no 205 EPHA5
srip86356 chr4 66809078 66809078 - L1-Ta germline . no 205 .
srip86627 chr4 69572737 69572737 - L1-Ta germline . no 205 LOC728811
srip87663 chr4 81660557 81660557 - L1-Ta germline . no 205 C4orf22
srip87911 chr4 86607956 86607956 + L1-Ta germline . no 205 ARHGAP24
srip89025 chr4 104214686 104214686 + L1-Ta germline . no 205 .
srip90000 chr4 112628973 112628973 + L1-Ta germline . no 205 .
srip90304 chr4 115132695 115132695 + L1-Ta germline . no 205 .
srip90396 chr4 116660152 116660152 - L1-Ta germline . no 205 .
srip90704 chr4 118765255 118765255 + L1-Ta germline . no 205 .
srip90826 chr4 120717544 120717544 - L1-Ta germline . no 205 .
srip92223 chr4 134596423 134596423 + L1-Ta germline . no 205 .
srip93124 chr4 147225296 147225296 + L1-Ta germline . no 205 SLC10A7
srip93868 chr4 158907272 158907272 - L1-Ta germline . no 205 .
srip95375 chr4 190659695 190659695 + L1-Ta germline . no 205 .
srip96059 chr5 8749515 8749515 + L1-Ta germline . no 205 .
srip97970 chr5 33633348 33633348 - L1-Ta germline . no 205 ADAMTS12
srip98038 chr5 33797544 33797544 - L1-Ta germline . no 205 ADAMTS12
srip98611 chr5 46396964 46396964 + L1-Ta germline . no 205 .
srip99716 chr5 79108566 79108566 - L1-Ta germline . no 205 .
srip100092 chr5 84239673 84239673 - L1-Ta germline . no 205 .
srip100783 chr5 89450781 89450781 + L1-Ta germline . no 205 .
srip101072 chr5 96866407 96866407 + L1-Ta germline . no 205 .
srip101696 chr5 105935373 105935373 + L1-Ta germline . no 205 .
srip104843 chr5 154873933 154873933 - L1-Ta germline . no 205 .
srip105581 chr5 159351199 159351199 - L1-Ta germline . no 205 ADRA1B
srip105785 chr5 162819864 162819864 + L1-Ta germline . no 205 .
srip105808 chr5 164495144 164495144 - L1-Ta germline . no 205 LOC100507193
srip107098 chr6 13191033 13191033 + L1-Ta germline . no 205 PHACTR1
srip107558 chr6 13503049 13503049 + L1-Ta germline . no 205 .
srip107757 chr6 22670019 22670019 - L1-pre-Ta germline . no 205 .
srip108094 chr6 32613444 32613444 + L1-Ta germline . no 205 .
srip109553 chr6 63368207 63368207 + L1-Ta germline . no 205 .
srip109968 chr6 68112755 68112755 - L1-Ta germline . no 205 .
srip111086 chr6 77980650 77980650 - L1-Ta germline . no 205 .
srip111218 chr6 78649689 78649689 - L1-Ta germline . no 205 .
srip112188 chr6 91669521 91669521 - L1-Ta germline . no 205 .
srip112389 chr6 98096213 98096213 + L1-Ta germline . no 205 .
srip113053 chr6 115350723 115350723 + L1-Ta germline . no 205 .
srip113547 chr6 136352984 136352984 - L1-Ta germline . no 205 PDE7B
srip113779 chr6 142450101 142450101 - L1-Ta germline . no 205 .
srip114736 chr6 148195789 148195789 + L1-Ta germline . no 205 .
srip114892 chr6 154215663 154215663 + L1-Ta germline . no 205 .
srip115085 chr6 157968737 157968737 - L1-Ta germline . no 205 ZDHHC14
srip116880 chr7 41310786 41310786 - L1-Ta germline . no 205 .
srip117492 chr7 52789472 52789472 + L1-Ta germline . no 205 .
srip117615 chr7 53652502 53652502 - L1-Ta germline . no 205 .
srip118198 chr7 62492930 62492930 + L1-Ta germline . no 205 .
srip119866 chr7 84901724 84901724 - L1-Ta germline . no 205 .
srip121142 chr7 105967895 105967895 + L1-Ta germline . no 205 .
srip121797 chr7 107829263 107829263 + L1-Ta germline . no 205 NRCAM
srip122253 chr7 110484749 110484749 + L1-Ta germline . no 205 IMMP2L
srip124047 chr8 4452894 4452894 - L1-Ta germline . no 205 CSMD1
srip124565 chr8 5829283 5829283 - L1-Ta germline . no 205 .
srip125051 chr8 21496230 21496230 + L1-Ta germline . no 205 .
srip125424 chr8 24926545 24926545 - L1-Ta germline . no 205 .
srip126929 chr8 67381885 67381885 - L1-Ta germline . no 205 .
srip126941 chr8 67758156 67758156 - L1-Ta germline . no 205 C8orf44-SGK3;SGK3
srip127334 chr8 72399221 72399221 - L1-Ta germline . no 205 .
srip128190 chr8 85428622 85428622 + L1-Ta germline . no 205 RALYL
srip128247 chr8 87315040 87315040 + L1-Ta germline . no 205 .
srip128445 chr8 92186265 92186265 - L1-Ta germline . no 205 LRRC69
srip128780 chr8 107557032 107557032 - L1-Ta germline . no 205 OXR1
srip129160 chr8 115788580 115788580 - L1-Ta germline . no 205 .
srip129670 chr8 119721703 119721703 - L1-Ta germline . no 205 SAMD12-AS1
srip130288 chr8 134889233 134889233 - L1-Ta germline . no 205 .
srip130732 chr9 5491418 5491418 + L1-Ta germline . no 205 .
srip131144 chr9 6290494 6290494 + L1-Ta germline . no 205 .
srip131386 chr9 8098791 8098791 - L1-Ta germline . no 205 .
srip131388 chr9 8344961 8344961 + L1-Ta germline . no 205 PTPRD
srip132405 chr9 30495887 30495887 - L1-Ta germline . no 205 .
srip132931 chr9 32092748 32092748 - L1-Ta germline . no 205 .
srip133455 chr9 32463894 32463894 - L1-Ta germline . no 205 DDX58
srip133688 chr9 35883708 35883708 + L1-Ta germline . no 205 .
srip133833 chr9 68420861 68420861 - L1-Ta germline . no 205 .
srip134513 chr9 94058488 94058488 - L1-Ta germline . no 205 AUH
srip134692 chr9 100675534 100675534 - L1-Ta germline . no 205 C9orf156
srip135994 chr9 118083880 118083880 - L1-Ta germline . no 205 DEC1
srip136178 chr9 138411456 138411456 + L1-Ta germline . no 205 .
srip137341 chrX 55264652 55264652 - L1-Ta germline . no 205 .
srip137590 chrX 55585160 55585160 - L1-Ta germline . no 205 .
srip138340 chrX 66982754 66982754 - L1-Ta germline . no 205 .
srip139304 chrX 84062854 84062854 + L1-Ta germline . no 205 .
srip140077 chrX 102363174 102363174 + L1-Ta germline . no 205 .
srip140449 chrX 111557750 111557750 - L1-Ta germline . no 205 ZCCHC16
srip142175 chrX 154790189 154790189 + L1-Ta germline . no 205 TMLHE
srip142225 chrY 9951878 9951878 - L1-pre-Ta germline . no 205 .
srip142316 chrY 13653796 13653796 - L1-Ta germline . no 205 .