euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

216 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip517 chr1 42483961 42483961 + L1-Ta germline . no 204 HIVEP3
srip657 chr1 49428739 49428739 - L1-Ta germline . no 204 AGBL4
srip853 chr1 56405398 56405398 - L1-Ta germline . no 204 LOC100507652
srip1165 chr1 62930369 62930369 + L1-Ta germline . no 204 DOCK7
srip2013 chr1 81855783 81855783 + L1-Ta germline . no 204 .
srip3076 chr1 102568923 102568923 + L1-Ta germline . no 204 .
srip3203 chr1 105028226 105028226 + L1-Ta germline . no 204 .
srip3285 chr1 105857777 105857777 - L1-Ta germline . no 204 .
srip3717 chr1 116980828 116980828 - L1-Ta germline . no 204 .
srip4046 chr1 149216797 149216797 + L1-Ta germline . no 204 .
srip5262 chr1 179373374 179373374 - L1-Ta germline . no 204 AXDND1
srip5639 chr1 187497268 187497268 + L1-Ta germline . no 204 .
srip5656 chr1 188521116 188521116 + L1-Ta germline . no 204 .
srip5993 chr1 192262254 192262254 - L1-Ta germline . no 204 .
srip6020 chr1 192262268 192262268 - L1-Ta germline . no 204 .
srip6279 chr1 194934648 194934648 - L1-Ta germline validated no 204 .
srip6377 chr1 207579511 207579511 + L1-Ta germline . no 204 .
srip6949 chr1 222579116 222579116 - L1-Ta germline . no 204 .
srip7663 chr10 8024988 8024988 + L1-Ta germline . no 204 TAF3
srip7775 chr10 16031588 16031588 + L1-Ta germline . no 204 .
srip8430 chr10 25707687 25707687 - L1-Ta germline . no 204 GPR158
srip8816 chr10 42465627 42465627 + L1-Ta germline . no 204 .
srip9484 chr10 68178133 68178133 + L1-Ta germline . no 204 CTNNA3
srip9693 chr10 74767506 74767506 - L1-Ta germline . no 204 P4HA1
srip11859 chr10 124455231 124455231 + L1-Ta germline . no 204 .
srip11901 chr10 126983631 126983631 - L1-Ta germline . no 204 .
srip11913 chr10 126983646 126983646 - L1-Ta germline . no 204 .
srip12266 chr11 7435902 7435902 - L1-Ta germline . no 204 SYT9
srip12322 chr11 10042438 10042438 - L1-Ta germline . no 204 SBF2
srip12584 chr11 15507484 15507484 - L1-Ta germline . no 204 .
srip13271 chr11 30180463 30180463 + L1-Ta germline . no 204 .
srip13947 chr11 39225160 39225160 - L1-Ta germline . no 204 .
srip14370 chr11 41831811 41831811 - L1-Ta germline . no 204 .
srip14769 chr11 48360753 48360753 - L1-Ta germline . no 204 .
srip15148 chr11 55870759 55870759 + L1-Ta germline . no 204 .
srip15838 chr11 63145370 63145370 + L1-Ta germline . no 204 SLC22A9
srip17770 chr11 104556130 104556130 - L1-Ta germline . no 204 .
srip18043 chr11 110377879 110377879 - L1-Ta germline . no 204 .
srip18560 chr11 127586306 127586306 - L1-Ta germline . no 204 .
srip19328 chr11 134305648 134305648 - L1-Ta germline . no 204 .
srip20722 chr12 28226413 28226413 - L1-Ta germline . no 204 .
srip21899 chr12 40147193 40147193 - L1-Ta germline . no 204 .
srip23373 chr12 67443914 67443914 - L1-Ta germline . no 204 .
srip23378 chr12 67444346 67444346 + L1-Ta germline . no 204 .
srip24433 chr12 84955216 84955216 - L1-Ta germline . no 204 .
srip24647 chr12 84965148 84965148 + L1-Ta germline . no 204 .
srip24920 chr12 85506290 85506290 + L1-Ta germline . no 204 LRRIQ1
srip25143 chr12 95808527 95808527 - L1-Ta germline . no 204 .
srip25255 chr12 98669929 98669929 + L1-Ta germline . no 204 .
srip26358 chr12 126802929 126802929 - L1-Ta germline . no 204 .
srip26646 chr12 128777545 128777545 - L1-Ta germline . no 204 TMEM132C
srip26742 chr13 21514956 21514956 - L1-Ta germline . no 204 .
srip26751 chr13 21514971 21514971 - L1-Ta germline . no 204 .
srip28439 chr13 58556528 58556528 + L1-Ta germline . no 204 .
srip29759 chr13 64569855 64569855 - L1-Ta germline . no 204 .
srip30221 chr13 70521044 70521044 - L1-Ta germline . no 204 KLHL1
srip31031 chr13 79259793 79259793 - L1-Ta germline . no 204 .
srip31437 chr13 85871602 85871602 - L1-Ta germline . no 204 .
srip32309 chr13 91149409 91149409 - L1-Ta germline . no 204 .
srip33506 chr13 104296223 104296223 - L1-Ta germline . no 204 .
srip33663 chr13 104395943 104395943 - L1-Ta germline . no 204 .
srip33805 chr13 105280146 105280146 - L1-Ta germline . no 204 .
srip35368 chr14 30854668 30854668 + L1-Ta germline . no 204 .
srip36040 chr14 36674760 36674760 + L1-Ta germline . no 204 .
srip36083 chr14 37769602 37769602 - L1-Ta germline . no 204 MIPOL1
srip36379 chr14 40689232 40689232 + L1-Ta germline . no 204 .
srip37160 chr14 52667758 52667758 - L1-Ta germline . no 204 .
srip37410 chr14 60241334 60241334 + L1-Ta germline . no 204 RTN1
srip37607 chr14 60669254 60669254 - L1-Ta germline . no 204 .
srip37862 chr14 67419863 67419863 - L1-Ta germline . no 204 GPHN
srip38413 chr14 86149599 86149599 + L1-Ta germline . no 204 .
srip39927 chr15 46304802 46304802 + L1-Ta germline . no 204 .
srip40924 chr15 53956099 53956099 + L1-Ta germline . no 204 WDR72
srip41647 chr15 61328974 61328974 - L1-Ta germline . no 204 RORA
srip43057 chr15 98622504 98622504 + L1-Ta germline . no 204 .
srip44783 chr16 32523893 32523893 - L1-Ta germline . no 204 .
srip45068 chr16 32525611 32525611 - L1-Ta germline . no 204 .
srip45490 chr16 33992430 33992430 + L1-Ta germline . no 204 .
srip45883 chr16 61079188 61079188 + L1-Ta germline . no 204 .
srip46396 chr16 76865776 76865776 - L1-Ta germline . no 204 .
srip46463 chr16 86017853 86017853 - L1-Ta germline . no 204 .
srip47368 chr17 28398313 28398313 + L1-Ta germline . no 204 EFCAB5
srip47779 chr17 33835798 33835798 - L1-Ta germline . no 204 .
srip48896 chr18 12491262 12491262 + L1-Ta germline . no 204 SPIRE1
srip50723 chr18 51762730 51762730 - L1-Ta germline . no 204 .
srip51824 chr18 74960068 74960068 - L1-Ta germline . no 204 .
srip52447 chr19 45444699 45444699 + L1-Ta germline . no 204 .
srip52775 chr2 6798288 6798288 - L1-Ta germline . no 204 .
srip53442 chr2 23191000 23191000 - L1-Ta germline . no 204 .
srip53684 chr2 24796757 24796757 + L1-Ta germline . no 204 .
srip54411 chr2 41913652 41913652 - L1-Ta germline . no 204 .
srip55005 chr2 59354253 59354253 + L1-Ta germline . no 204 .
srip55306 chr2 69168896 69168896 - L1-Ta germline . no 204 .
srip55808 chr2 79929388 79929388 + L1-Ta germline . no 204 CTNNA2
srip56764 chr2 102912450 102912450 + L1-Ta germline . no 204 .
srip56904 chr2 106163164 106163164 + L1-Ta germline . no 204 .
srip57271 chr2 109450686 109450686 - L1-Ta germline . no 204 CCDC138
srip57669 chr2 129372166 129372166 + L1-Ta germline . no 204 .
srip58222 chr2 141852908 141852908 - L1-Ta germline . no 204 LRP1B
srip60144 chr2 178676245 178676245 - L1-Ta germline . no 204 PDE11A
srip61685 chr2 213114174 213114174 + L1-Ta germline . no 204 ERBB4
srip62468 chr2 232482740 232482740 + L1-Ta germline . no 204 .
srip62622 chr2 235519794 235519794 + L1-Ta germline . no 204 .
srip63648 chr20 17860937 17860937 + L1-Ta germline . no 204 .
srip63938 chr20 22702082 22702082 - L1-Ta germline . no 204 .
srip65619 chr21 17134462 17134462 + L1-Ta germline . no 204 USP25
srip66040 chr21 19517313 19517313 - L1-Ta germline . no 204 .
srip66268 chr21 23626191 23626191 - L1-Ta germline . no 204 .
srip66878 chr21 29069171 29069171 + L1-Ta germline . no 204 .
srip67448 chr22 22486369 22486369 - L1-Ta germline . no 204 IGL@
srip70082 chr3 17409573 17409573 - L1-Ta germline . no 204 TBC1D5
srip70620 chr3 21800882 21800882 + L1-Ta germline . no 204 .
srip71319 chr3 30419383 30419383 - L1-Ta germline . no 204 .
srip71930 chr3 38626082 38626082 + L1-Ta germline . no 204 SCN5A
srip72751 chr3 55788580 55788580 + L1-Ta germline . no 204 ERC2
srip73421 chr3 59852903 59852903 + L1-Ta germline . no 204 FHIT
srip74711 chr3 81990993 81990993 - L1-Ta germline . no 204 .
srip74966 chr3 83613997 83613997 + L1-Ta germline . no 204 .
srip75725 chr3 85868023 85868023 + L1-Ta germline . no 204 CADM2
srip75835 chr3 86264950 86264950 - L1-Ta germline . no 204 .
srip75910 chr3 89022346 89022346 - L1-Ta germline . no 204 .
srip76701 chr3 111275065 111275065 + L1-Ta germline . no 204 CD96
srip77289 chr3 123590726 123590726 + L1-Ta germline . no 204 MYLK
srip77503 chr3 131069779 131069779 + L1-Ta germline . no 204 LOC339874
srip78151 chr3 143121759 143121759 - L1-Ta germline . no 204 SLC9A9
srip78612 chr3 151148544 151148544 - L1-Ta germline . no 204 MED12L
srip80408 chr3 176091333 176091333 + L1-Ta germline . no 204 .
srip81530 chr3 186372141 186372141 + L1-Ta germline . no 204 .
srip81658 chr3 187835309 187835309 - L1-Ta germline . no 204 .
srip81746 chr3 188234418 188234418 + L1-Ta germline . no 204 LPP
srip83357 chr4 20246382 20246382 + L1-Ta germline . no 204 .
srip84896 chr4 47007790 47007790 - L1-Ta germline . no 204 .
srip86626 chr4 69572737 69572737 - L1-Ta germline . no 204 LOC728811
srip88145 chr4 98103803 98103803 - L1-Ta germline . no 204 .
srip88831 chr4 103343746 103343746 + L1-Ta germline . no 204 .
srip89604 chr4 110248316 110248316 - L1-Ta germline . no 204 .
srip89677 chr4 110248332 110248332 - L1-Ta germline . no 204 .
srip89695 chr4 111863090 111863090 - L1-Ta germline . no 204 .
srip90303 chr4 115132695 115132695 + L1-Ta germline . no 204 .
srip91234 chr4 128965442 128965442 - L1-Ta germline . no 204 .
srip92785 chr4 138177325 138177325 + L1-Ta germline . no 204 .
srip92922 chr4 146927741 146927741 - L1-Ta germline . no 204 .
srip93123 chr4 147225296 147225296 + L1-Ta germline . no 204 SLC10A7
srip93955 chr4 161691145 161691145 - L1-Ta germline . no 204 .
srip94653 chr4 175685423 175685423 + L1-Ta germline . no 204 GLRA3
srip95374 chr4 190659695 190659695 + L1-Ta germline . no 204 .
srip95482 chr5 1645773 1645773 + L1-Ta germline . no 204 .
srip96058 chr5 8749515 8749515 + L1-Ta germline . no 204 .
srip96811 chr5 19180399 19180399 + L1-Ta germline . no 204 .
srip96916 chr5 21207732 21207732 + L1-Ta germline . no 204 .
srip97969 chr5 33633348 33633348 - L1-Ta germline . no 204 ADAMTS12
srip100091 chr5 84239673 84239673 - L1-Ta germline . no 204 .
srip100782 chr5 89450781 89450781 + L1-Ta germline . no 204 .
srip101071 chr5 96866407 96866407 + L1-Ta germline . no 204 .
srip102266 chr5 109480258 109480258 - L1-Ta germline . no 204 .
srip102535 chr5 109567542 109567542 + L1-Ta germline . no 204 .
srip102705 chr5 112449703 112449703 - L1-Ta germline validated no 204 MCC
srip102763 chr5 114516456 114516456 - L1-Ta germline . no 204 .
srip103381 chr5 125040045 125040045 + L1-Ta germline . no 204 .
srip103767 chr5 137014775 137014775 - L1-Ta germline . no 204 KLHL3
srip105242 chr5 155619865 155619865 + L1-Ta germline . no 204 .
srip105496 chr5 159290933 159290933 - L1-Ta germline . no 204 .
srip107097 chr6 13191033 13191033 + L1-Ta germline . no 204 PHACTR1
srip107557 chr6 13503049 13503049 + L1-Ta germline . no 204 .
srip107614 chr6 16950834 16950834 - L1-Ta germline . no 204 .
srip107630 chr6 16950957 16950957 - L1-Ta germline . no 204 .
srip108093 chr6 32613444 32613444 + L1-Ta germline . no 204 .
srip108105 chr6 32638838 32638838 - L1-Ta germline . no 204 .
srip108281 chr6 45852697 45852697 - L1-Ta germline . no 204 .
srip108958 chr6 56729315 56729315 - L1-Ta germline . no 204 LOC100652827
srip109967 chr6 68112755 68112755 - L1-Ta germline . no 204 .
srip109985 chr6 68132365 68132365 - L1-Ta germline validated no 204 .
srip111085 chr6 77980650 77980650 - L1-Ta germline . no 204 .
srip112187 chr6 91669521 91669521 - L1-Ta germline . no 204 .
srip112296 chr6 91767655 91767655 + L1-Ta germline . no 204 .
srip113778 chr6 142450101 142450101 - L1-Ta germline . no 204 .
srip114735 chr6 148195789 148195789 + L1-Ta germline . no 204 .
srip114891 chr6 154215663 154215663 + L1-Ta germline . no 204 .
srip115084 chr6 157968737 157968737 - L1-Ta germline . no 204 ZDHHC14
srip115561 chr6 162181257 162181257 + L1-Ta germline . no 204 PARK2
srip116284 chr7 16661318 16661318 + L1-Ta germline . no 204 ANKMY2
srip116432 chr7 22416950 22416950 - L1-Ta germline . no 204 .
srip116596 chr7 26794906 26794906 + L1-Ta germline . no 204 SKAP2
srip117491 chr7 52789472 52789472 + L1-Ta germline . no 204 .
srip117709 chr7 56543635 56543635 - L1-Ta germline . no 204 .
srip117972 chr7 61778308 61778308 - L1-Ta germline . no 204 .
srip119865 chr7 84901724 84901724 - L1-Ta germline . no 204 .
srip120760 chr7 93146611 93146611 - L1-Ta germline . no 204 CALCR
srip121796 chr7 107829263 107829263 + L1-Ta germline . no 204 NRCAM
srip122252 chr7 110484749 110484749 + L1-Ta germline . no 204 IMMP2L
srip122596 chr7 119446561 119446561 - L1-Ta germline . no 204 .
srip122975 chr7 127930866 127930866 - L1-Ta germline . no 204 .
srip123347 chr7 142818667 142818667 + L1-Ta germline . no 204 .
srip123417 chr7 144908637 144908637 - L1-Ta germline . no 204 .
srip123424 chr7 144908830 144908830 + L1-Ta germline . no 204 .
srip124564 chr8 5829283 5829283 - L1-Ta germline . no 204 .
srip125423 chr8 24926545 24926545 - L1-Ta germline . no 204 .
srip126407 chr8 58347940 58347940 + L1-Ta germline . no 204 .
srip126928 chr8 67381885 67381885 - L1-Ta germline . no 204 .
srip128444 chr8 92186265 92186265 - L1-Ta germline . no 204 LRRC69
srip128541 chr8 98185149 98185149 - L1-Ta germline . no 204 .
srip128779 chr8 107557032 107557032 - L1-Ta germline . no 204 OXR1
srip129015 chr8 115773126 115773126 + L1-Ta germline . no 204 .
srip129490 chr8 115881781 115881781 + L1-Ta germline . no 204 .
srip131385 chr9 8098791 8098791 - L1-Ta germline . no 204 .
srip132930 chr9 32092748 32092748 - L1-Ta germline . no 204 .
srip133454 chr9 32463894 32463894 - L1-Ta germline . no 204 DDX58
srip133687 chr9 35883708 35883708 + L1-Ta germline . no 204 .
srip133832 chr9 68420861 68420861 - L1-Ta germline . no 204 .
srip134231 chr9 82082793 82082793 - L1-Ta germline . no 204 .
srip134691 chr9 100675534 100675534 - L1-Ta germline . no 204 C9orf156
srip135993 chr9 118083880 118083880 - L1-Ta germline . no 204 DEC1
srip141116 chrX 123611800 123611800 + L1-Ta germline . no 204 ODZ1
srip141134 chrX 123612276 123612276 - L1-Ta germline . no 204 ODZ1
srip141966 chrX 140515258 140515258 - L1-Ta germline . no 204 .
srip142224 chrY 9951878 9951878 - L1-pre-Ta germline . no 204 .