euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

207 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip516 chr1 42483961 42483961 + L1-Ta germline . no 203 HIVEP3
srip656 chr1 49428739 49428739 - L1-Ta germline . no 203 AGBL4
srip852 chr1 56405398 56405398 - L1-Ta germline . no 203 LOC100507652
srip2012 chr1 81855783 81855783 + L1-Ta germline . no 203 .
srip3075 chr1 102568923 102568923 + L1-Ta germline . no 203 .
srip3202 chr1 105028226 105028226 + L1-Ta germline . no 203 .
srip3284 chr1 105857777 105857777 - L1-Ta germline . no 203 .
srip3716 chr1 116980828 116980828 - L1-Ta germline . no 203 .
srip4045 chr1 149216797 149216797 + L1-Ta germline . no 203 .
srip5261 chr1 179373374 179373374 - L1-Ta germline . no 203 AXDND1
srip5638 chr1 187497268 187497268 + L1-Ta germline . no 203 .
srip5655 chr1 188521116 188521116 + L1-Ta germline . no 203 .
srip6019 chr1 192262268 192262268 - L1-Ta germline . no 203 .
srip6278 chr1 194934648 194934648 - L1-Ta germline validated no 203 .
srip6376 chr1 207579511 207579511 + L1-Ta germline . no 203 .
srip6948 chr1 222579116 222579116 - L1-Ta germline . no 203 .
srip7461 chr1 248454039 248454039 - L1-pre-Ta germline . no 203 .
srip7662 chr10 8024988 8024988 + L1-Ta germline . no 203 TAF3
srip7774 chr10 16031588 16031588 + L1-Ta germline . no 203 .
srip8429 chr10 25707687 25707687 - L1-Ta germline . no 203 GPR158
srip11858 chr10 124455231 124455231 + L1-Ta germline . no 203 .
srip11900 chr10 126983631 126983631 - L1-Ta germline . no 203 .
srip11912 chr10 126983646 126983646 - L1-Ta germline . no 203 .
srip12265 chr11 7435902 7435902 - L1-Ta germline . no 203 SYT9
srip12321 chr11 10042438 10042438 - L1-Ta germline . no 203 SBF2
srip12583 chr11 15507484 15507484 - L1-Ta germline . no 203 .
srip13270 chr11 30180463 30180463 + L1-Ta germline . no 203 .
srip13854 chr11 36558472 36558472 - L1-Ta germline . no 203 .
srip13946 chr11 39225160 39225160 - L1-Ta germline . no 203 .
srip14369 chr11 41831811 41831811 - L1-Ta germline . no 203 .
srip15147 chr11 55870759 55870759 + L1-Ta germline . no 203 .
srip17769 chr11 104556130 104556130 - L1-Ta germline . no 203 .
srip18042 chr11 110377879 110377879 - L1-Ta germline . no 203 .
srip19327 chr11 134305648 134305648 - L1-Ta germline . no 203 .
srip20721 chr12 28226413 28226413 - L1-Ta germline . no 203 .
srip21898 chr12 40147193 40147193 - L1-Ta germline . no 203 .
srip23372 chr12 67443914 67443914 - L1-Ta germline . no 203 .
srip23377 chr12 67444346 67444346 + L1-Ta germline . no 203 .
srip24432 chr12 84955216 84955216 - L1-Ta germline . no 203 .
srip24646 chr12 84965148 84965148 + L1-Ta germline . no 203 .
srip24919 chr12 85506290 85506290 + L1-Ta germline . no 203 LRRIQ1
srip25142 chr12 95808527 95808527 - L1-Ta germline . no 203 .
srip26357 chr12 126802929 126802929 - L1-Ta germline . no 203 .
srip26645 chr12 128777545 128777545 - L1-Ta germline . no 203 TMEM132C
srip26741 chr13 21514956 21514956 - L1-Ta germline . no 203 .
srip26750 chr13 21514971 21514971 - L1-Ta germline . no 203 .
srip26762 chr13 21817193 21817193 - L1-Ta germline . no 203 .
srip29758 chr13 64569855 64569855 - L1-Ta germline . no 203 .
srip30220 chr13 70521044 70521044 - L1-Ta germline . no 203 KLHL1
srip31030 chr13 79259793 79259793 - L1-Ta germline . no 203 .
srip31436 chr13 85871602 85871602 - L1-Ta germline . no 203 .
srip32308 chr13 91149409 91149409 - L1-Ta germline . no 203 .
srip33505 chr13 104296223 104296223 - L1-Ta germline . no 203 .
srip33662 chr13 104395943 104395943 - L1-Ta germline . no 203 .
srip33804 chr13 105280146 105280146 - L1-Ta germline . no 203 .
srip35256 chr14 28301261 28301261 + L1-Ta germline . no 203 .
srip35367 chr14 30854668 30854668 + L1-Ta germline . no 203 .
srip36039 chr14 36674760 36674760 + L1-Ta germline . no 203 .
srip36378 chr14 40689232 40689232 + L1-Ta germline . no 203 .
srip37159 chr14 52667758 52667758 - L1-Ta germline . no 203 .
srip37409 chr14 60241334 60241334 + L1-Ta germline . no 203 RTN1
srip37606 chr14 60669254 60669254 - L1-Ta germline . no 203 .
srip37861 chr14 67419863 67419863 - L1-Ta germline . no 203 GPHN
srip38412 chr14 86149599 86149599 + L1-Ta germline . no 203 .
srip39926 chr15 46304802 46304802 + L1-Ta germline . no 203 .
srip40923 chr15 53956099 53956099 + L1-Ta germline . no 203 WDR72
srip41646 chr15 61328974 61328974 - L1-Ta germline . no 203 RORA
srip43056 chr15 98622504 98622504 + L1-Ta germline . no 203 .
srip44782 chr16 32523893 32523893 - L1-Ta germline . no 203 .
srip45067 chr16 32525611 32525611 - L1-Ta germline . no 203 .
srip45489 chr16 33992430 33992430 + L1-Ta germline . no 203 .
srip45882 chr16 61079188 61079188 + L1-Ta germline . no 203 .
srip46395 chr16 76865776 76865776 - L1-Ta germline . no 203 .
srip46462 chr16 86017853 86017853 - L1-Ta germline . no 203 .
srip46490 chr17 1503363 1503363 - L1-Ta germline . no 203 SLC43A2
srip47367 chr17 28398313 28398313 + L1-Ta germline . no 203 EFCAB5
srip47778 chr17 33835798 33835798 - L1-Ta germline . no 203 .
srip48895 chr18 12491262 12491262 + L1-Ta germline . no 203 SPIRE1
srip50722 chr18 51762730 51762730 - L1-Ta germline . no 203 .
srip51823 chr18 74960068 74960068 - L1-Ta germline . no 203 .
srip52774 chr2 6798288 6798288 - L1-Ta germline . no 203 .
srip53441 chr2 23191000 23191000 - L1-Ta germline . no 203 .
srip54410 chr2 41913652 41913652 - L1-Ta germline . no 203 .
srip55004 chr2 59354253 59354253 + L1-Ta germline . no 203 .
srip55305 chr2 69168896 69168896 - L1-Ta germline . no 203 .
srip55807 chr2 79929388 79929388 + L1-Ta germline . no 203 CTNNA2
srip56763 chr2 102912450 102912450 + L1-Ta germline . no 203 .
srip56903 chr2 106163164 106163164 + L1-Ta germline . no 203 .
srip57270 chr2 109450686 109450686 - L1-Ta germline . no 203 CCDC138
srip57668 chr2 129372166 129372166 + L1-Ta germline . no 203 .
srip57823 chr2 132868182 132868182 - L1-Ta germline . no 203 .
srip58221 chr2 141852908 141852908 - L1-Ta germline . no 203 LRP1B
srip60143 chr2 178676245 178676245 - L1-Ta germline . no 203 PDE11A
srip61684 chr2 213114174 213114174 + L1-Ta germline . no 203 ERBB4
srip62467 chr2 232482740 232482740 + L1-Ta germline . no 203 .
srip62621 chr2 235519794 235519794 + L1-Ta germline . no 203 .
srip63647 chr20 17860937 17860937 + L1-Ta germline . no 203 .
srip63937 chr20 22702082 22702082 - L1-Ta germline . no 203 .
srip64013 chr20 25844027 25844027 + L1-Ta germline . no 203 .
srip65618 chr21 17134462 17134462 + L1-Ta germline . no 203 USP25
srip66039 chr21 19517313 19517313 - L1-Ta germline . no 203 .
srip66267 chr21 23626191 23626191 - L1-Ta germline . no 203 .
srip66877 chr21 29069171 29069171 + L1-Ta germline . no 203 .
srip67447 chr22 22486369 22486369 - L1-Ta germline . no 203 IGL@
srip69644 chr3 656435 656435 - L1-Ta germline . no 203 .
srip70081 chr3 17409573 17409573 - L1-Ta germline . no 203 TBC1D5
srip70619 chr3 21800882 21800882 + L1-Ta germline . no 203 .
srip71318 chr3 30419383 30419383 - L1-Ta germline . no 203 .
srip71929 chr3 38626082 38626082 + L1-Ta germline . no 203 SCN5A
srip72750 chr3 55788580 55788580 + L1-Ta germline . no 203 ERC2
srip73420 chr3 59852903 59852903 + L1-Ta germline . no 203 FHIT
srip74710 chr3 81990993 81990993 - L1-Ta germline . no 203 .
srip74965 chr3 83613997 83613997 + L1-Ta germline . no 203 .
srip75724 chr3 85868023 85868023 + L1-Ta germline . no 203 CADM2
srip75834 chr3 86264950 86264950 - L1-Ta germline . no 203 .
srip75909 chr3 89022346 89022346 - L1-Ta germline . no 203 .
srip76822 chr3 119046413 119046413 + L1-Ta germline . no 203 ARHGAP31
srip77288 chr3 123590726 123590726 + L1-Ta germline . no 203 MYLK
srip77502 chr3 131069779 131069779 + L1-Ta germline . no 203 LOC339874
srip78150 chr3 143121759 143121759 - L1-Ta germline . no 203 SLC9A9
srip78611 chr3 151148544 151148544 - L1-Ta germline . no 203 MED12L
srip80407 chr3 176091333 176091333 + L1-Ta germline . no 203 .
srip81529 chr3 186372141 186372141 + L1-Ta germline . no 203 .
srip81657 chr3 187835309 187835309 - L1-Ta germline . no 203 .
srip83356 chr4 20246382 20246382 + L1-Ta germline . no 203 .
srip84895 chr4 47007790 47007790 - L1-Ta germline . no 203 .
srip86625 chr4 69572737 69572737 - L1-Ta germline . no 203 LOC728811
srip88144 chr4 98103803 98103803 - L1-Ta germline . no 203 .
srip88830 chr4 103343746 103343746 + L1-Ta germline . no 203 .
srip89603 chr4 110248316 110248316 - L1-Ta germline . no 203 .
srip89676 chr4 110248332 110248332 - L1-Ta germline . no 203 .
srip89694 chr4 111863090 111863090 - L1-Ta germline . no 203 .
srip90302 chr4 115132695 115132695 + L1-Ta germline . no 203 .
srip91233 chr4 128965442 128965442 - L1-Ta germline . no 203 .
srip92784 chr4 138177325 138177325 + L1-Ta germline . no 203 .
srip92921 chr4 146927741 146927741 - L1-Ta germline . no 203 .
srip93122 chr4 147225296 147225296 + L1-Ta germline . no 203 SLC10A7
srip93954 chr4 161691145 161691145 - L1-Ta germline . no 203 .
srip94483 chr4 170281923 170281923 - L1-Ta germline . no 203 .
srip94652 chr4 175685423 175685423 + L1-Ta germline . no 203 GLRA3
srip95373 chr4 190659695 190659695 + L1-Ta germline . no 203 .
srip95481 chr5 1645773 1645773 + L1-Ta germline . no 203 .
srip96057 chr5 8749515 8749515 + L1-Ta germline . no 203 .
srip96915 chr5 21207732 21207732 + L1-Ta germline . no 203 .
srip97968 chr5 33633348 33633348 - L1-Ta germline . no 203 ADAMTS12
srip99768 chr5 83619783 83619783 - L1-Ta germline . no 203 EDIL3
srip100090 chr5 84239673 84239673 - L1-Ta germline . no 203 .
srip100781 chr5 89450781 89450781 + L1-Ta germline . no 203 .
srip101070 chr5 96866407 96866407 + L1-Ta germline . no 203 .
srip102265 chr5 109480258 109480258 - L1-Ta germline . no 203 .
srip102534 chr5 109567542 109567542 + L1-Ta germline . no 203 .
srip102704 chr5 112449703 112449703 - L1-Ta germline validated no 203 MCC
srip102762 chr5 114516456 114516456 - L1-Ta germline . no 203 .
srip103380 chr5 125040045 125040045 + L1-Ta germline . no 203 .
srip103766 chr5 137014775 137014775 - L1-Ta germline . no 203 KLHL3
srip105241 chr5 155619865 155619865 + L1-Ta germline . no 203 .
srip105495 chr5 159290933 159290933 - L1-Ta germline . no 203 .
srip107096 chr6 13191033 13191033 + L1-Ta germline . no 203 PHACTR1
srip107556 chr6 13503049 13503049 + L1-Ta germline . no 203 .
srip107629 chr6 16950957 16950957 - L1-Ta germline . no 203 .
srip108092 chr6 32613444 32613444 + L1-Ta germline . no 203 .
srip108104 chr6 32638838 32638838 - L1-Ta germline . no 203 .
srip108280 chr6 45852697 45852697 - L1-Ta germline . no 203 .
srip108957 chr6 56729315 56729315 - L1-Ta germline . no 203 LOC100652827
srip109966 chr6 68112755 68112755 - L1-Ta germline . no 203 .
srip109984 chr6 68132365 68132365 - L1-Ta germline validated no 203 .
srip111084 chr6 77980650 77980650 - L1-Ta germline . no 203 .
srip112186 chr6 91669521 91669521 - L1-Ta germline . no 203 .
srip112295 chr6 91767655 91767655 + L1-Ta germline . no 203 .
srip113777 chr6 142450101 142450101 - L1-Ta germline . no 203 .
srip114734 chr6 148195789 148195789 + L1-Ta germline . no 203 .
srip114890 chr6 154215663 154215663 + L1-Ta germline . no 203 .
srip115083 chr6 157968737 157968737 - L1-Ta germline . no 203 ZDHHC14
srip115560 chr6 162181257 162181257 + L1-Ta germline . no 203 PARK2
srip116283 chr7 16661318 16661318 + L1-Ta germline . no 203 ANKMY2
srip116431 chr7 22416950 22416950 - L1-Ta germline . no 203 .
srip116595 chr7 26794906 26794906 + L1-Ta germline . no 203 SKAP2
srip117490 chr7 52789472 52789472 + L1-Ta germline . no 203 .
srip117934 chr7 61079049 61079049 + L1-Ta germline . no 203 .
srip117971 chr7 61778308 61778308 - L1-Ta germline . no 203 .
srip119864 chr7 84901724 84901724 - L1-Ta germline . no 203 .
srip120759 chr7 93146611 93146611 - L1-Ta germline . no 203 CALCR
srip121795 chr7 107829263 107829263 + L1-Ta germline . no 203 NRCAM
srip122251 chr7 110484749 110484749 + L1-Ta germline . no 203 IMMP2L
srip122595 chr7 119446561 119446561 - L1-Ta germline . no 203 .
srip122974 chr7 127930866 127930866 - L1-Ta germline . no 203 .
srip123346 chr7 142818667 142818667 + L1-Ta germline . no 203 .
srip123416 chr7 144908637 144908637 - L1-Ta germline . no 203 .
srip123423 chr7 144908830 144908830 + L1-Ta germline . no 203 .
srip124563 chr8 5829283 5829283 - L1-Ta germline . no 203 .
srip125422 chr8 24926545 24926545 - L1-Ta germline . no 203 .
srip126406 chr8 58347940 58347940 + L1-Ta germline . no 203 .
srip126927 chr8 67381885 67381885 - L1-Ta germline . no 203 .
srip126940 chr8 67758156 67758156 - L1-Ta germline . no 203 C8orf44-SGK3;SGK3
srip128443 chr8 92186265 92186265 - L1-Ta germline . no 203 LRRC69
srip128540 chr8 98185149 98185149 - L1-Ta germline . no 203 .
srip128778 chr8 107557032 107557032 - L1-Ta germline . no 203 OXR1
srip129489 chr8 115881781 115881781 + L1-Ta germline . no 203 .
srip133453 chr9 32463894 32463894 - L1-Ta germline . no 203 DDX58
srip133686 chr9 35883708 35883708 + L1-Ta germline . no 203 .
srip133831 chr9 68420861 68420861 - L1-Ta germline . no 203 .
srip134230 chr9 82082793 82082793 - L1-Ta germline . no 203 .
srip134690 chr9 100675534 100675534 - L1-Ta germline . no 203 C9orf156
srip135992 chr9 118083880 118083880 - L1-Ta germline . no 203 DEC1
srip141115 chrX 123611800 123611800 + L1-Ta germline . no 203 ODZ1
srip141133 chrX 123612276 123612276 - L1-Ta germline . no 203 ODZ1
srip141965 chrX 140515258 140515258 - L1-Ta germline . no 203 .