euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

205 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip99 chr1 18080828 18080828 - L1-Ta germline . no 202 .
srip612 chr1 48647978 48647978 + L1-Ta germline . no 202 SKINTL
srip655 chr1 49428739 49428739 - L1-Ta germline . no 202 AGBL4
srip851 chr1 56405398 56405398 - L1-Ta germline . no 202 LOC100507652
srip2011 chr1 81855783 81855783 + L1-Ta germline . no 202 .
srip2041 chr1 81922396 81922396 - L1-Ta germline . no 202 .
srip2464 chr1 95801843 95801843 - L1-Ta germline . no 202 .
srip3074 chr1 102568923 102568923 + L1-Ta germline . no 202 .
srip3201 chr1 105028226 105028226 + L1-Ta germline . no 202 .
srip3660 chr1 116548018 116548018 - L1-Ta germline . no 202 SLC22A15
srip4044 chr1 149216797 149216797 + L1-Ta germline . no 202 .
srip4249 chr1 157732949 157732949 + L1-Ta germline . no 202 FCRL2
srip5992 chr1 192262254 192262254 - L1-Ta germline . no 202 .
srip6018 chr1 192262268 192262268 - L1-Ta germline . no 202 .
srip6277 chr1 194934648 194934648 - L1-Ta germline validated no 202 .
srip6375 chr1 207579511 207579511 + L1-Ta germline . no 202 .
srip7409 chr1 242311577 242311577 + L1-Ta germline validated no 202 PLD5
srip8428 chr10 25707687 25707687 - L1-Ta germline . no 202 GPR158
srip8901 chr10 53063103 53063103 - L1-Ta germline . no 202 PRKG1
srip9396 chr10 68167047 68167047 + L1-Ta germline . no 202 CTNNA3
srip9483 chr10 68178133 68178133 + L1-Ta germline . no 202 CTNNA3
srip9491 chr10 68496837 68496837 - L1-Ta germline . no 202 CTNNA3
srip10647 chr10 94292473 94292473 - L1-Ta germline . no 202 IDE
srip11857 chr10 124455231 124455231 + L1-Ta germline . no 202 .
srip12356 chr11 14647682 14647682 - L1-Ta germline . no 202 PSMA1
srip13796 chr11 33670123 33670123 + L1-Ta germline . no 202 C11orf41
srip13984 chr11 40841271 40841271 + L1-Ta germline . no 202 .
srip14368 chr11 41831811 41831811 - L1-Ta germline . no 202 .
srip14768 chr11 48360753 48360753 - L1-Ta germline . no 202 .
srip16521 chr11 83652350 83652350 - L1-Ta germline . no 202 DLG2
srip17213 chr11 94684368 94684368 + L1-Ta germline . no 202 .
srip18281 chr11 114895524 114895524 + L1-Ta germline . no 202 .
srip19326 chr11 134305648 134305648 - L1-Ta germline . no 202 .
srip19665 chr12 8105629 8105629 + L1-Ta germline . no 202 .
srip20720 chr12 28226413 28226413 - L1-Ta germline . no 202 .
srip20872 chr12 31353751 31353751 - L1-pre-Ta germline . no 202 OVOS2
srip21163 chr12 34017325 34017325 - L1-Ta germline . no 202 .
srip22982 chr12 60100701 60100701 - L1-Ta germline . no 202 SLC16A7
srip24645 chr12 84965148 84965148 + L1-Ta germline . no 202 .
srip24918 chr12 85506290 85506290 + L1-Ta germline . no 202 LRRIQ1
srip25141 chr12 95808527 95808527 - L1-Ta germline . no 202 .
srip26009 chr12 118186926 118186926 + L1-Ta germline . no 202 KSR2
srip26356 chr12 126802929 126802929 - L1-Ta germline . no 202 .
srip28172 chr13 48856541 48856541 + L1-Ta germline . no 202 .
srip28331 chr13 55238031 55238031 + L1-Ta germline . no 202 .
srip29057 chr13 61462336 61462336 - L1-Ta germline . no 202 .
srip29757 chr13 64569855 64569855 - L1-Ta germline . no 202 .
srip29789 chr13 64732415 64732415 - L1-Ta germline . no 202 .
srip31029 chr13 79259793 79259793 - L1-Ta germline . no 202 .
srip31435 chr13 85871602 85871602 - L1-Ta germline . no 202 .
srip33504 chr13 104296223 104296223 - L1-Ta germline . no 202 .
srip33661 chr13 104395943 104395943 - L1-Ta germline . no 202 .
srip33803 chr13 105280146 105280146 - L1-Ta germline . no 202 .
srip34053 chr13 107845347 107845347 + L1-Ta germline . no 202 FAM155A
srip35574 chr14 34140125 34140125 - L1-Ta germline . no 202 NPAS3
srip36038 chr14 36674760 36674760 + L1-Ta germline . no 202 .
srip36082 chr14 37769602 37769602 - L1-Ta germline . no 202 MIPOL1
srip37158 chr14 52667758 52667758 - L1-Ta germline . no 202 .
srip37358 chr14 59220402 59220402 + L1-Ta germline . no 202 .
srip37860 chr14 67419863 67419863 - L1-Ta germline . no 202 GPHN
srip37952 chr14 68784244 68784244 + L1-Ta germline . no 202 RAD51B
srip38158 chr14 71197799 71197799 + L1-Ta germline . no 202 MAP3K9
srip38293 chr14 72333719 72333719 - L1-Ta germline . no 202 .
srip39031 chr15 22412531 22412531 - L1-Ta germline . no 202 .
srip41254 chr15 56251153 56251153 + L1-Ta germline . no 202 NEDD4
srip43055 chr15 98622504 98622504 + L1-Ta germline . no 202 .
srip43407 chr15 100931161 100931161 - L1-Ta germline . no 202 .
srip43648 chr16 6793831 6793831 + L1-Ta germline . no 202 RBFOX1
srip44477 chr16 25764862 25764862 - L1-Ta germline . no 202 HS3ST4
srip44781 chr16 32523893 32523893 - L1-Ta germline . no 202 .
srip45066 chr16 32525611 32525611 - L1-Ta germline . no 202 .
srip45881 chr16 61079188 61079188 + L1-Ta germline . no 202 .
srip45975 chr16 65911504 65911504 + L1-Ta germline . no 202 .
srip46394 chr16 76865776 76865776 - L1-Ta germline . no 202 .
srip47366 chr17 28398313 28398313 + L1-Ta germline . no 202 EFCAB5
srip47590 chr17 32813605 32813605 + L1-Ta germline . no 202 .
srip49233 chr18 27219200 27219200 - L1-Ta germline . no 202 .
srip49438 chr18 28732902 28732902 - L1-Ta germline . no 202 DSC1
srip50010 chr18 49216219 49216219 - L1-Ta germline . no 202 .
srip50409 chr18 51488332 51488332 - L1-Ta germline . no 202 .
srip50721 chr18 51762730 51762730 - L1-Ta germline . no 202 .
srip52446 chr19 45444699 45444699 + L1-Ta germline . no 202 .
srip52773 chr2 6798288 6798288 - L1-Ta germline . no 202 .
srip53440 chr2 23191000 23191000 - L1-Ta germline . no 202 .
srip53683 chr2 24796757 24796757 + L1-Ta germline . no 202 .
srip53955 chr2 35879359 35879359 + L1-Ta germline . no 202 .
srip54225 chr2 36570243 36570243 - L1-Ta germline . no 202 .
srip55031 chr2 63593495 63593495 + L1-Ta germline . no 202 WDPCP
srip55304 chr2 69168896 69168896 - L1-Ta germline . no 202 .
srip56616 chr2 92291306 92291306 - L1-Ta germline . no 202 .
srip57446 chr2 120295119 120295119 - L1-Ta germline . no 202 .
srip57637 chr2 126973475 126973475 - L1-Ta germline . no 202 .
srip57667 chr2 129372166 129372166 + L1-Ta germline . no 202 .
srip58021 chr2 141774997 141774997 - L1-Ta germline . no 202 LRP1B
srip58220 chr2 141852908 141852908 - L1-Ta germline . no 202 LRP1B
srip58260 chr2 142771742 142771742 - L1-Ta germline . no 202 LRP1B
srip59497 chr2 154100589 154100589 - L1-Ta germline . no 202 .
srip59668 chr2 163396813 163396813 - L1-Ta germline . no 202 KCNH7
srip59958 chr2 177704489 177704489 - L1-Ta germline . no 202 .
srip60142 chr2 178676245 178676245 - L1-Ta germline . no 202 PDE11A
srip61923 chr2 221278223 221278223 - L1-Ta germline . no 202 .
srip63198 chr20 9477925 9477925 - L1-Ta germline . no 202 .
srip63646 chr20 17860937 17860937 + L1-Ta germline . no 202 .
srip65337 chr20 60132832 60132832 - L1-Ta germline . no 202 CDH4
srip65617 chr21 17134462 17134462 + L1-Ta germline . no 202 USP25
srip66266 chr21 23626191 23626191 - L1-Ta germline . no 202 .
srip66876 chr21 29069171 29069171 + L1-Ta germline . no 202 .
srip69817 chr3 3408044 3408044 + L1-Ta germline . no 202 .
srip70080 chr3 17409573 17409573 - L1-Ta germline . no 202 TBC1D5
srip70664 chr3 23106622 23106622 + L1-Ta germline . no 202 .
srip70819 chr3 25278891 25278891 - L1-Ta germline . no 202 .
srip71170 chr3 26524464 26524464 - L1-Ta germline . no 202 .
srip72749 chr3 55788580 55788580 + L1-Ta germline . no 202 ERC2
srip73419 chr3 59852903 59852903 + L1-Ta germline . no 202 FHIT
srip74431 chr3 80590163 80590163 - L1-Ta germline . no 202 .
srip75908 chr3 89022346 89022346 - L1-Ta germline . no 202 .
srip76624 chr3 109751770 109751770 + L1-Ta germline . no 202 .
srip77287 chr3 123590726 123590726 + L1-Ta germline . no 202 MYLK
srip78610 chr3 151148544 151148544 - L1-Ta germline . no 202 MED12L
srip79888 chr3 169269964 169269964 + L1-Ta germline . no 202 MECOM
srip80226 chr3 175677970 175677970 - L1-Ta germline . no 202 .
srip80406 chr3 176091333 176091333 + L1-Ta germline . no 202 .
srip81528 chr3 186372141 186372141 + L1-Ta germline . no 202 .
srip81656 chr3 187835309 187835309 - L1-Ta germline . no 202 .
srip83355 chr4 20246382 20246382 + L1-Ta germline . no 202 .
srip84894 chr4 47007790 47007790 - L1-Ta germline . no 202 .
srip85134 chr4 53628490 53628490 + L1-Ta germline . no 202 .
srip86624 chr4 69572737 69572737 - L1-Ta germline . no 202 LOC728811
srip87221 chr4 80768518 80768518 + L1-Ta germline . no 202 GDEP
srip87354 chr4 80768541 80768541 + L1-Ta germline . no 202 GDEP
srip87746 chr4 83119433 83119433 - L1-Ta germline . no 202 .
srip88143 chr4 98103803 98103803 - L1-Ta germline . no 202 .
srip89602 chr4 110248316 110248316 - L1-Ta germline . no 202 .
srip89675 chr4 110248332 110248332 - L1-Ta germline . no 202 .
srip91232 chr4 128965442 128965442 - L1-Ta germline . no 202 .
srip92783 chr4 138177325 138177325 + L1-Ta germline . no 202 .
srip93121 chr4 147225296 147225296 + L1-Ta germline . no 202 SLC10A7
srip93210 chr4 147605810 147605810 + L1-Ta germline . no 202 .
srip93381 chr4 152732810 152732810 - L1-Ta germline . no 202 .
srip93748 chr4 157447970 157447970 + L1-Ta germline . no 202 .
srip93752 chr4 157597326 157597326 + L1-Ta germline . no 202 .
srip93867 chr4 158907272 158907272 - L1-Ta germline . no 202 .
srip94042 chr4 165231730 165231730 - L1-Ta germline . no 202 MARCH1
srip94482 chr4 170281923 170281923 - L1-Ta germline . no 202 .
srip95077 chr4 182418058 182418058 - L1-Ta germline . no 202 .
srip95372 chr4 190659695 190659695 + L1-Ta germline . no 202 .
srip95480 chr5 1645773 1645773 + L1-Ta germline . no 202 .
srip96056 chr5 8749515 8749515 + L1-Ta germline . no 202 .
srip97339 chr5 30975979 30975979 + L1-Ta germline . no 202 .
srip97967 chr5 33633348 33633348 - L1-Ta germline . no 202 ADAMTS12
srip98037 chr5 33797544 33797544 - L1-Ta germline . no 202 ADAMTS12
srip99496 chr5 68263461 68263461 - L1-Ta germline . no 202 .
srip100089 chr5 84239673 84239673 - L1-Ta germline . no 202 .
srip100112 chr5 85151992 85151992 + L1-Ta germline . no 202 .
srip100780 chr5 89450781 89450781 + L1-Ta germline . no 202 .
srip101069 chr5 96866407 96866407 + L1-Ta germline . no 202 .
srip102264 chr5 109480258 109480258 - L1-Ta germline . no 202 .
srip104009 chr5 143413889 143413889 + L1-Ta germline . no 202 .
srip105240 chr5 155619865 155619865 + L1-Ta germline . no 202 .
srip107095 chr6 13191033 13191033 + L1-Ta germline . no 202 PHACTR1
srip107555 chr6 13503049 13503049 + L1-Ta germline . no 202 .
srip107628 chr6 16950957 16950957 - L1-Ta germline . no 202 .
srip109571 chr6 63415756 63415756 + L1-Ta germline . no 202 .
srip109965 chr6 68112755 68112755 - L1-Ta germline . no 202 .
srip111083 chr6 77980650 77980650 - L1-Ta germline . no 202 .
srip112294 chr6 91767655 91767655 + L1-Ta germline . no 202 .
srip112388 chr6 98096213 98096213 + L1-Ta germline . no 202 .
srip113776 chr6 142450101 142450101 - L1-Ta germline . no 202 .
srip114447 chr6 148163587 148163587 + L1-Ta germline . no 202 .
srip114889 chr6 154215663 154215663 + L1-Ta germline . no 202 .
srip115082 chr6 157968737 157968737 - L1-Ta germline . no 202 ZDHHC14
srip117080 chr7 45485689 45485689 + L1-Ta germline . no 202 .
srip118538 chr7 68194507 68194507 - L1-Ta germline . no 202 .
srip118875 chr7 70188676 70188676 - L1-Ta germline . no 202 AUTS2
srip120235 chr7 85044737 85044737 + L1-Ta germline . no 202 .
srip121794 chr7 107829263 107829263 + L1-Ta germline . no 202 NRCAM
srip122373 chr7 112789594 112789594 - L1-Ta germline . no 202 .
srip122464 chr7 112789623 112789623 - L1-Ta germline . no 202 .
srip122973 chr7 127930866 127930866 - L1-Ta germline . no 202 .
srip123415 chr7 144908637 144908637 - L1-Ta germline . no 202 .
srip123422 chr7 144908830 144908830 + L1-Ta germline . no 202 .
srip124046 chr8 4452894 4452894 - L1-Ta germline . no 202 CSMD1
srip125421 chr8 24926545 24926545 - L1-Ta germline . no 202 .
srip126405 chr8 58347940 58347940 + L1-Ta germline . no 202 .
srip126926 chr8 67381885 67381885 - L1-Ta germline . no 202 .
srip127575 chr8 75723722 75723722 + L1-Ta germline . no 202 .
srip128014 chr8 83740679 83740679 + L1-Ta germline . no 202 .
srip128246 chr8 87315040 87315040 + L1-Ta germline . no 202 .
srip128698 chr8 100525412 100525412 - L1-Ta germline . no 202 VPS13B
srip128815 chr8 110381758 110381758 - L1-Ta germline . no 202 PKHD1L1
srip128851 chr8 111632621 111632621 + L1-Ta germline . no 202 .
srip131656 chr9 10163174 10163174 + L1-Ta germline . no 202 PTPRD
srip132102 chr9 29260374 29260374 + L1-Ta germline . no 202 .
srip132626 chr9 30674468 30674468 - L1-Ta germline . no 202 .
srip133452 chr9 32463894 32463894 - L1-Ta germline . no 202 DDX58
srip133685 chr9 35883708 35883708 + L1-Ta germline . no 202 .
srip135046 chr9 105073654 105073654 + L1-Ta germline . no 202 .
srip136037 chr9 121394590 121394590 - L1-Ta germline . no 202 .
srip136103 chr9 125419570 125419570 + L1-Ta germline . no 202 .
srip136531 chrX 14152012 14152012 - L1-Ta germline . no 202 .
srip136921 chrX 34942104 34942104 - L1-Ta germline . no 202 .
srip137646 chrX 57806448 57806448 - L1-Ta germline . no 202 .
srip141114 chrX 123611800 123611800 + L1-Ta germline . no 202 ODZ1
srip142029 chrX 143704684 143704684 + L1-Ta germline . no 202 .
srip142223 chrY 9951878 9951878 - L1-pre-Ta germline . no 202 .