euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

209 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip95 chr1 17229479 17229479 - L1-Ta germline . no 201 .
srip98 chr1 18080828 18080828 - L1-Ta germline . no 201 .
srip611 chr1 48647978 48647978 + L1-Ta germline . no 201 SKINTL
srip850 chr1 56405398 56405398 - L1-Ta germline . no 201 LOC100507652
srip2010 chr1 81855783 81855783 + L1-Ta germline . no 201 .
srip2040 chr1 81922396 81922396 - L1-Ta germline . no 201 .
srip2463 chr1 95801843 95801843 - L1-Ta germline . no 201 .
srip3073 chr1 102568923 102568923 + L1-Ta germline . no 201 .
srip3200 chr1 105028226 105028226 + L1-Ta germline . no 201 .
srip3659 chr1 116548018 116548018 - L1-Ta germline . no 201 SLC22A15
srip4248 chr1 157732949 157732949 + L1-Ta germline . no 201 FCRL2
srip5991 chr1 192262254 192262254 - L1-Ta germline . no 201 .
srip6017 chr1 192262268 192262268 - L1-Ta germline . no 201 .
srip6276 chr1 194934648 194934648 - L1-Ta germline validated no 201 .
srip6374 chr1 207579511 207579511 + L1-Ta germline . no 201 .
srip6929 chr1 221827821 221827821 - L1-Ta germline . no 201 .
srip7408 chr1 242311577 242311577 + L1-Ta germline validated no 201 PLD5
srip8427 chr10 25707687 25707687 - L1-Ta germline . no 201 GPR158
srip8900 chr10 53063103 53063103 - L1-Ta germline . no 201 PRKG1
srip9395 chr10 68167047 68167047 + L1-Ta germline . no 201 CTNNA3
srip9482 chr10 68178133 68178133 + L1-Ta germline . no 201 CTNNA3
srip9490 chr10 68496837 68496837 - L1-Ta germline . no 201 CTNNA3
srip9692 chr10 74767506 74767506 - L1-Ta germline . no 201 P4HA1
srip10646 chr10 94292473 94292473 - L1-Ta germline . no 201 IDE
srip11856 chr10 124455231 124455231 + L1-Ta germline . no 201 .
srip12355 chr11 14647682 14647682 - L1-Ta germline . no 201 PSMA1
srip13983 chr11 40841271 40841271 + L1-Ta germline . no 201 .
srip14367 chr11 41831811 41831811 - L1-Ta germline . no 201 .
srip14767 chr11 48360753 48360753 - L1-Ta germline . no 201 .
srip15359 chr11 58171838 58171838 + L1-Ta germline . no 201 .
srip15546 chr11 60136439 60136439 + L1-Ta somatic validated no 201 .
srip16520 chr11 83652350 83652350 - L1-Ta germline . no 201 DLG2
srip17212 chr11 94684368 94684368 + L1-Ta germline . no 201 .
srip18280 chr11 114895524 114895524 + L1-Ta germline . no 201 .
srip19325 chr11 134305648 134305648 - L1-Ta germline . no 201 .
srip19664 chr12 8105629 8105629 + L1-Ta germline . no 201 .
srip20719 chr12 28226413 28226413 - L1-Ta germline . no 201 .
srip20871 chr12 31353751 31353751 - L1-pre-Ta germline . no 201 OVOS2
srip21162 chr12 34017325 34017325 - L1-Ta germline . no 201 .
srip22981 chr12 60100701 60100701 - L1-Ta germline . no 201 SLC16A7
srip23031 chr12 63569179 63569179 + L1-Ta germline . no 201 .
srip24644 chr12 84965148 84965148 + L1-Ta germline . no 201 .
srip24917 chr12 85506290 85506290 + L1-Ta germline . no 201 LRRIQ1
srip25140 chr12 95808527 95808527 - L1-Ta germline . no 201 .
srip25254 chr12 98669929 98669929 + L1-Ta germline . no 201 .
srip26008 chr12 118186926 118186926 + L1-Ta germline . no 201 KSR2
srip26355 chr12 126802929 126802929 - L1-Ta germline . no 201 .
srip28171 chr13 48856541 48856541 + L1-Ta germline . no 201 .
srip28330 chr13 55238031 55238031 + L1-Ta germline . no 201 .
srip29056 chr13 61462336 61462336 - L1-Ta germline . no 201 .
srip29756 chr13 64569855 64569855 - L1-Ta germline . no 201 .
srip29788 chr13 64732415 64732415 - L1-Ta germline . no 201 .
srip31028 chr13 79259793 79259793 - L1-Ta germline . no 201 .
srip31434 chr13 85871602 85871602 - L1-Ta germline . no 201 .
srip33503 chr13 104296223 104296223 - L1-Ta germline . no 201 .
srip33660 chr13 104395943 104395943 - L1-Ta germline . no 201 .
srip33802 chr13 105280146 105280146 - L1-Ta germline . no 201 .
srip34052 chr13 107845347 107845347 + L1-Ta germline . no 201 FAM155A
srip35255 chr14 28301261 28301261 + L1-Ta germline . no 201 .
srip35573 chr14 34140125 34140125 - L1-Ta germline . no 201 NPAS3
srip36037 chr14 36674760 36674760 + L1-Ta germline . no 201 .
srip36081 chr14 37769602 37769602 - L1-Ta germline . no 201 MIPOL1
srip37157 chr14 52667758 52667758 - L1-Ta germline . no 201 .
srip37357 chr14 59220402 59220402 + L1-Ta germline . no 201 .
srip37670 chr14 66525023 66525023 + L1-Ta somatic validated no 201 .
srip37859 chr14 67419863 67419863 - L1-Ta germline . no 201 GPHN
srip37951 chr14 68784244 68784244 + L1-Ta germline . no 201 RAD51B
srip38157 chr14 71197799 71197799 + L1-Ta germline . no 201 MAP3K9
srip38292 chr14 72333719 72333719 - L1-Ta germline . no 201 .
srip38952 chr14 107038564 107038564 + L1-Ta germline . no 201 IGH@
srip39030 chr15 22412531 22412531 - L1-Ta germline . no 201 .
srip40982 chr15 55040825 55040825 + L1-Ta somatic validated no 201 .
srip41253 chr15 56251153 56251153 + L1-Ta germline . no 201 NEDD4
srip43054 chr15 98622504 98622504 + L1-Ta germline . no 201 .
srip43406 chr15 100931161 100931161 - L1-Ta germline . no 201 .
srip43647 chr16 6793831 6793831 + L1-Ta germline . no 201 RBFOX1
srip44476 chr16 25764862 25764862 - L1-Ta germline . no 201 HS3ST4
srip45065 chr16 32525611 32525611 - L1-Ta germline . no 201 .
srip45880 chr16 61079188 61079188 + L1-Ta germline . no 201 .
srip47365 chr17 28398313 28398313 + L1-Ta germline . no 201 EFCAB5
srip47589 chr17 32813605 32813605 + L1-Ta germline . no 201 .
srip49232 chr18 27219200 27219200 - L1-Ta germline . no 201 .
srip49437 chr18 28732902 28732902 - L1-Ta germline . no 201 DSC1
srip50009 chr18 49216219 49216219 - L1-Ta germline . no 201 .
srip50408 chr18 51488332 51488332 - L1-Ta germline . no 201 .
srip50720 chr18 51762730 51762730 - L1-Ta germline . no 201 .
srip51181 chr18 62947200 62947200 - L1-Ta germline . no 201 .
srip52445 chr19 45444699 45444699 + L1-Ta germline . no 201 .
srip52772 chr2 6798288 6798288 - L1-Ta germline . no 201 .
srip53439 chr2 23191000 23191000 - L1-Ta germline . no 201 .
srip53682 chr2 24796757 24796757 + L1-Ta germline . no 201 .
srip53954 chr2 35879359 35879359 + L1-Ta germline . no 201 .
srip54224 chr2 36570243 36570243 - L1-Ta germline . no 201 .
srip55303 chr2 69168896 69168896 - L1-Ta germline . no 201 .
srip56615 chr2 92291306 92291306 - L1-Ta germline . no 201 .
srip56671 chr2 92319790 92319790 - L1-Ta germline . no 201 .
srip57445 chr2 120295119 120295119 - L1-Ta germline . no 201 .
srip57636 chr2 126973475 126973475 - L1-Ta germline . no 201 .
srip57666 chr2 129372166 129372166 + L1-Ta germline . no 201 .
srip58020 chr2 141774997 141774997 - L1-Ta germline . no 201 LRP1B
srip58219 chr2 141852908 141852908 - L1-Ta germline . no 201 LRP1B
srip59496 chr2 154100589 154100589 - L1-Ta germline . no 201 .
srip59667 chr2 163396813 163396813 - L1-Ta germline . no 201 KCNH7
srip59957 chr2 177704489 177704489 - L1-Ta germline . no 201 .
srip60141 chr2 178676245 178676245 - L1-Ta germline . no 201 PDE11A
srip61922 chr2 221278223 221278223 - L1-Ta germline . no 201 .
srip63197 chr20 9477925 9477925 - L1-Ta germline . no 201 .
srip63645 chr20 17860937 17860937 + L1-Ta germline . no 201 .
srip65616 chr21 17134462 17134462 + L1-Ta germline . no 201 USP25
srip66265 chr21 23626191 23626191 - L1-Ta germline . no 201 .
srip66875 chr21 29069171 29069171 + L1-Ta germline . no 201 .
srip69643 chr3 656435 656435 - L1-Ta germline . no 201 .
srip69816 chr3 3408044 3408044 + L1-Ta germline . no 201 .
srip70079 chr3 17409573 17409573 - L1-Ta germline . no 201 TBC1D5
srip70663 chr3 23106622 23106622 + L1-Ta germline . no 201 .
srip70818 chr3 25278891 25278891 - L1-Ta germline . no 201 .
srip71169 chr3 26524464 26524464 - L1-Ta germline . no 201 .
srip72748 chr3 55788580 55788580 + L1-Ta germline . no 201 ERC2
srip73418 chr3 59852903 59852903 + L1-Ta germline . no 201 FHIT
srip74430 chr3 80590163 80590163 - L1-Ta germline . no 201 .
srip75907 chr3 89022346 89022346 - L1-Ta germline . no 201 .
srip76821 chr3 119046413 119046413 + L1-Ta germline . no 201 ARHGAP31
srip77286 chr3 123590726 123590726 + L1-Ta germline . no 201 MYLK
srip78609 chr3 151148544 151148544 - L1-Ta germline . no 201 MED12L
srip79887 chr3 169269964 169269964 + L1-Ta germline . no 201 MECOM
srip80225 chr3 175677970 175677970 - L1-Ta germline . no 201 .
srip80405 chr3 176091333 176091333 + L1-Ta germline . no 201 .
srip81527 chr3 186372141 186372141 + L1-Ta germline . no 201 .
srip81655 chr3 187835309 187835309 - L1-Ta germline . no 201 .
srip83354 chr4 20246382 20246382 + L1-Ta germline . no 201 .
srip84893 chr4 47007790 47007790 - L1-Ta germline . no 201 .
srip85133 chr4 53628490 53628490 + L1-Ta germline . no 201 .
srip86623 chr4 69572737 69572737 - L1-Ta germline . no 201 LOC728811
srip87353 chr4 80768541 80768541 + L1-Ta germline . no 201 GDEP
srip87745 chr4 83119433 83119433 - L1-Ta germline . no 201 .
srip88142 chr4 98103803 98103803 - L1-Ta germline . no 201 .
srip89601 chr4 110248316 110248316 - L1-Ta germline . no 201 .
srip89674 chr4 110248332 110248332 - L1-Ta germline . no 201 .
srip91231 chr4 128965442 128965442 - L1-Ta germline . no 201 .
srip92782 chr4 138177325 138177325 + L1-Ta germline . no 201 .
srip93120 chr4 147225296 147225296 + L1-Ta germline . no 201 SLC10A7
srip93209 chr4 147605810 147605810 + L1-Ta germline . no 201 .
srip93380 chr4 152732810 152732810 - L1-Ta germline . no 201 .
srip93747 chr4 157447970 157447970 + L1-Ta germline . no 201 .
srip93751 chr4 157597326 157597326 + L1-Ta germline . no 201 .
srip93866 chr4 158907272 158907272 - L1-Ta germline . no 201 .
srip94041 chr4 165231730 165231730 - L1-Ta germline . no 201 MARCH1
srip95076 chr4 182418058 182418058 - L1-Ta germline . no 201 .
srip95371 chr4 190659695 190659695 + L1-Ta germline . no 201 .
srip95479 chr5 1645773 1645773 + L1-Ta germline . no 201 .
srip97338 chr5 30975979 30975979 + L1-Ta germline . no 201 .
srip97966 chr5 33633348 33633348 - L1-Ta germline . no 201 ADAMTS12
srip98315 chr5 41428535 41428535 + L1-Ta germline . no 201 PLCXD3
srip98610 chr5 46396964 46396964 + L1-Ta germline . no 201 .
srip99495 chr5 68263461 68263461 - L1-Ta germline . no 201 .
srip100088 chr5 84239673 84239673 - L1-Ta germline . no 201 .
srip100111 chr5 85151992 85151992 + L1-Ta germline . no 201 .
srip100779 chr5 89450781 89450781 + L1-Ta germline . no 201 .
srip101068 chr5 96866407 96866407 + L1-Ta germline . no 201 .
srip102263 chr5 109480258 109480258 - L1-Ta germline . no 201 .
srip104008 chr5 143413889 143413889 + L1-Ta germline . no 201 .
srip105239 chr5 155619865 155619865 + L1-Ta germline . no 201 .
srip107094 chr6 13191033 13191033 + L1-Ta germline . no 201 PHACTR1
srip107554 chr6 13503049 13503049 + L1-Ta germline . no 201 .
srip107627 chr6 16950957 16950957 - L1-Ta germline . no 201 .
srip109570 chr6 63415756 63415756 + L1-Ta germline . no 201 .
srip109964 chr6 68112755 68112755 - L1-Ta germline . no 201 .
srip111082 chr6 77980650 77980650 - L1-Ta germline . no 201 .
srip111217 chr6 78649689 78649689 - L1-Ta germline . no 201 .
srip112293 chr6 91767655 91767655 + L1-Ta germline . no 201 .
srip112387 chr6 98096213 98096213 + L1-Ta germline . no 201 .
srip113775 chr6 142450101 142450101 - L1-Ta germline . no 201 .
srip114446 chr6 148163587 148163587 + L1-Ta germline . no 201 .
srip114888 chr6 154215663 154215663 + L1-Ta germline . no 201 .
srip115081 chr6 157968737 157968737 - L1-Ta germline . no 201 ZDHHC14
srip117079 chr7 45485689 45485689 + L1-Ta germline . no 201 .
srip118537 chr7 68194507 68194507 - L1-Ta germline . no 201 .
srip118874 chr7 70188676 70188676 - L1-Ta germline . no 201 AUTS2
srip120234 chr7 85044737 85044737 + L1-Ta germline . no 201 .
srip122372 chr7 112789594 112789594 - L1-Ta germline . no 201 .
srip122463 chr7 112789623 112789623 - L1-Ta germline . no 201 .
srip122972 chr7 127930866 127930866 - L1-Ta germline . no 201 .
srip123414 chr7 144908637 144908637 - L1-Ta germline . no 201 .
srip123421 chr7 144908830 144908830 + L1-Ta germline . no 201 .
srip124045 chr8 4452894 4452894 - L1-Ta germline . no 201 CSMD1
srip125420 chr8 24926545 24926545 - L1-Ta germline . no 201 .
srip126404 chr8 58347940 58347940 + L1-Ta germline . no 201 .
srip126925 chr8 67381885 67381885 - L1-Ta germline . no 201 .
srip127574 chr8 75723722 75723722 + L1-Ta germline . no 201 .
srip128013 chr8 83740679 83740679 + L1-Ta germline . no 201 .
srip128245 chr8 87315040 87315040 + L1-Ta germline . no 201 .
srip128697 chr8 100525412 100525412 - L1-Ta germline . no 201 VPS13B
srip128814 chr8 110381758 110381758 - L1-Ta germline . no 201 PKHD1L1
srip128850 chr8 111632621 111632621 + L1-Ta germline . no 201 .
srip131655 chr9 10163174 10163174 + L1-Ta germline . no 201 PTPRD
srip132101 chr9 29260374 29260374 + L1-Ta germline . no 201 .
srip133451 chr9 32463894 32463894 - L1-Ta germline . no 201 DDX58
srip133684 chr9 35883708 35883708 + L1-Ta germline . no 201 .
srip136036 chr9 121394590 121394590 - L1-Ta germline . no 201 .
srip136102 chr9 125419570 125419570 + L1-Ta germline . no 201 .
srip136164 chr9 136105857 136105857 - L1-Ta germline . no 201 .
srip136530 chrX 14152012 14152012 - L1-Ta germline . no 201 .
srip136920 chrX 34942104 34942104 - L1-Ta germline . no 201 .
srip137645 chrX 57806448 57806448 - L1-Ta germline . no 201 .
srip139811 chrX 99180431 99180431 + L1-Ta somatic validated no 201 LOC442459
srip141113 chrX 123611800 123611800 + L1-Ta germline . no 201 ODZ1
srip141132 chrX 123612276 123612276 - L1-Ta germline . no 201 ODZ1
srip142028 chrX 143704684 143704684 + L1-Ta germline . no 201 .
srip142222 chrY 9951878 9951878 - L1-pre-Ta germline . no 201 .