euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

228 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip513 chr1 42483961 42483961 + L1-Ta germline . no 198 HIVEP3
srip692 chr1 52669191 52669191 - L1-Ta germline . no 198 ZFYVE9
srip849 chr1 56405398 56405398 - L1-Ta germline . no 198 LOC100507652
srip2007 chr1 81855783 81855783 + L1-Ta germline . no 198 .
srip2419 chr1 95729448 95729448 - L1-Ta germline . no 198 .
srip3624 chr1 114046370 114046370 + L1-Ta germline . no 198 MAGI3
srip4017 chr1 145061906 145061906 + L1-Ta germline validated no 198 PDE4DIP
srip4041 chr1 149216797 149216797 + L1-Ta germline . no 198 .
srip4247 chr1 157732949 157732949 + L1-Ta germline . no 198 FCRL2
srip5037 chr1 169524859 169524859 + L1-Ta germline . no 198 F5
srip5990 chr1 192262254 192262254 - L1-Ta germline . no 198 .
srip6016 chr1 192262268 192262268 - L1-Ta germline . no 198 .
srip6275 chr1 194934648 194934648 - L1-Ta germline validated no 198 .
srip6371 chr1 207579511 207579511 + L1-Ta germline . no 198 .
srip7458 chr1 248454039 248454039 - L1-pre-Ta germline . no 198 .
srip8003 chr10 19216652 19216652 + L1-Ta germline . no 198 .
srip8424 chr10 25707687 25707687 - L1-Ta germline . no 198 GPR158
srip8815 chr10 42465627 42465627 + L1-Ta germline . no 198 .
srip9481 chr10 68178133 68178133 + L1-Ta germline . no 198 CTNNA3
srip9594 chr10 68949325 68949325 + L1-Ta germline . no 198 CTNNA3
srip9689 chr10 74767506 74767506 - L1-Ta germline . no 198 P4HA1
srip11210 chr10 110453470 110453470 + L1-Ta germline . no 198 .
srip12869 chr11 25123354 25123354 - L1-Ta germline . no 198 .
srip13793 chr11 33670123 33670123 + L1-Ta germline . no 198 C11orf41
srip14364 chr11 41831811 41831811 - L1-Ta germline . no 198 .
srip14562 chr11 43356955 43356955 + L1-Ta germline . no 198 API5
srip14764 chr11 48360753 48360753 - L1-Ta germline . no 198 .
srip15356 chr11 58171838 58171838 + L1-Ta germline . no 198 .
srip15834 chr11 63048427 63048427 + L1-Ta germline . no 198 .
srip17209 chr11 94684368 94684368 + L1-Ta germline . no 198 .
srip17290 chr11 97077820 97077820 - L1-Ta germline . no 198 .
srip17768 chr11 104556130 104556130 - L1-Ta germline . no 198 .
srip19322 chr11 134305648 134305648 - L1-Ta germline . no 198 .
srip20461 chr12 25775841 25775841 - L1-Ta germline . no 198 IFLTD1
srip20718 chr12 28226413 28226413 - L1-Ta germline . no 198 .
srip22261 chr12 43256986 43256986 - L1-Ta germline . no 198 .
srip22980 chr12 60100701 60100701 - L1-Ta germline . no 198 SLC16A7
srip23030 chr12 63569179 63569179 + L1-Ta germline . no 198 .
srip23508 chr12 71020045 71020045 + L1-Ta germline . no 198 PTPRB
srip24916 chr12 85506290 85506290 + L1-Ta germline . no 198 LRRIQ1
srip25028 chr12 92326094 92326094 + L1-Ta germline . no 198 .
srip25137 chr12 95808527 95808527 - L1-Ta germline . no 198 .
srip25337 chr12 102292839 102292839 - L1-Ta germline . no 198 DRAM1
srip29053 chr13 61462336 61462336 - L1-Ta germline . no 198 .
srip29623 chr13 61734485 61734485 + L1-Ta germline . no 198 .
srip29860 chr13 65549225 65549225 - L1-Ta germline . no 198 .
srip30392 chr13 72968682 72968682 + L1-Ta germline . no 198 .
srip30645 chr13 78693222 78693222 + L1-Ta germline . no 198 .
srip31025 chr13 79259793 79259793 - L1-Ta germline . no 198 .
srip31431 chr13 85871602 85871602 - L1-Ta germline . no 198 .
srip32306 chr13 91149409 91149409 - L1-Ta germline . no 198 .
srip32398 chr13 91626223 91626223 + L1-Ta germline . no 198 .
srip33500 chr13 104296223 104296223 - L1-Ta germline . no 198 .
srip33657 chr13 104395943 104395943 - L1-Ta germline . no 198 .
srip33799 chr13 105280146 105280146 - L1-Ta germline . no 198 .
srip34290 chr14 19000969 19000969 + L1-Ta germline . no 198 .
srip34458 chr14 24992912 24992912 - L1-Ta germline . no 198 .
srip35252 chr14 28301261 28301261 + L1-Ta germline . no 198 .
srip35366 chr14 30854668 30854668 + L1-Ta germline . no 198 .
srip35572 chr14 34140125 34140125 - L1-Ta germline . no 198 NPAS3
srip36034 chr14 36674760 36674760 + L1-Ta germline . no 198 .
srip37154 chr14 52667758 52667758 - L1-Ta germline . no 198 .
srip37216 chr14 59160899 59160899 + L1-Ta germline . no 198 .
srip37605 chr14 60669254 60669254 - L1-Ta germline . no 198 .
srip37858 chr14 67419863 67419863 - L1-Ta germline . no 198 GPHN
srip38156 chr14 71197799 71197799 + L1-Ta germline . no 198 MAP3K9
srip38612 chr14 86381796 86381796 - L1-Ta germline . no 198 .
srip39511 chr15 34031839 34031839 - L1-Ta germline . no 198 RYR3
srip39582 chr15 34621609 34621609 + L1-Ta germline . no 198 SLC12A6
srip39753 chr15 37707890 37707890 - L1-Ta germline . no 198 .
srip40217 chr15 47507329 47507329 - L1-Ta germline . no 198 SEMA6D
srip41250 chr15 56251153 56251153 + L1-Ta germline . no 198 NEDD4
srip43403 chr15 100931161 100931161 - L1-Ta germline . no 198 .
srip43644 chr16 6793831 6793831 + L1-Ta germline . no 198 RBFOX1
srip44083 chr16 17755305 17755305 - L1-Ta germline . no 198 .
srip44779 chr16 32523893 32523893 - L1-Ta germline . no 198 .
srip45062 chr16 32525611 32525611 - L1-Ta germline . no 198 .
srip45486 chr16 33992430 33992430 + L1-Ta germline . no 198 .
srip45527 chr16 34001600 34001600 + L1-Ta germline . no 198 .
srip45877 chr16 61079188 61079188 + L1-Ta germline . no 198 .
srip46383 chr16 76539036 76539036 + L1-Ta germline validated no 198 CNTNAP4
srip47364 chr17 28398313 28398313 + L1-Ta germline . no 198 EFCAB5
srip47588 chr17 32813605 32813605 + L1-Ta germline . no 198 .
srip48894 chr18 12491262 12491262 + L1-Ta germline . no 198 SPIRE1
srip49068 chr18 25797181 25797181 + L1-Ta germline . no 198 .
srip49781 chr18 39896936 39896936 - L1-Ta germline . no 198 .
srip50369 chr18 51451044 51451044 - L1-Ta germline . no 198 .
srip50405 chr18 51488332 51488332 - L1-Ta germline . no 198 .
srip53436 chr2 23191000 23191000 - L1-Ta germline . no 198 .
srip53681 chr2 24796757 24796757 + L1-Ta germline . no 198 .
srip53951 chr2 35879359 35879359 + L1-Ta germline . no 198 .
srip54407 chr2 41913652 41913652 - L1-Ta germline . no 198 .
srip54602 chr2 42051403 42051403 + L1-Ta germline . no 198 .
srip54652 chr2 42051416 42051416 + L1-Ta germline . no 198 .
srip54924 chr2 53460052 53460052 + L1-Ta germline . no 198 .
srip55302 chr2 69168896 69168896 - L1-Ta germline . no 198 .
srip56245 chr2 82098043 82098043 + L1-Ta germline . no 198 .
srip56528 chr2 83252984 83252984 + L1-Ta germline . no 198 .
srip56614 chr2 92291306 92291306 - L1-Ta germline . no 198 .
srip56670 chr2 92319790 92319790 - L1-Ta germline . no 198 .
srip57665 chr2 129372166 129372166 + L1-Ta germline . no 198 .
srip57820 chr2 132868182 132868182 - L1-Ta germline . no 198 .
srip58216 chr2 141852908 141852908 - L1-Ta germline . no 198 LRP1B
srip58325 chr2 142785302 142785302 + L1-Ta germline . no 198 LRP1B
srip58674 chr2 144910831 144910831 - L1-Ta germline . no 198 GTDC1
srip59607 chr2 156527822 156527822 + L1-Ta germline . no 198 .
srip60802 chr2 191478714 191478714 - L1-Ta germline . no 198 .
srip62173 chr2 221503768 221503768 - L1-Ta germline . no 198 .
srip62620 chr2 235519794 235519794 + L1-Ta germline . no 198 .
srip66036 chr21 19517313 19517313 - L1-Ta germline . no 198 .
srip66262 chr21 23626191 23626191 - L1-Ta germline . no 198 .
srip66872 chr21 29069171 29069171 + L1-Ta germline . no 198 .
srip67168 chr22 17282131 17282131 + L1-Ta germline . no 198 XKR3
srip67446 chr22 22486369 22486369 - L1-Ta germline . no 198 IGL@
srip68902 chr22 44324605 44324605 - L1-Ta germline . no 198 PNPLA3
srip69641 chr3 656435 656435 - L1-Ta germline . no 198 .
srip69815 chr3 3408044 3408044 + L1-Ta germline . no 198 .
srip70076 chr3 17409573 17409573 - L1-Ta germline . no 198 TBC1D5
srip70805 chr3 24987874 24987874 - L1-Ta germline . no 198 .
srip71168 chr3 26524464 26524464 - L1-Ta germline . no 198 .
srip72747 chr3 55788580 55788580 + L1-Ta germline . no 198 ERC2
srip72761 chr3 55788634 55788634 + L1-Ta germline . no 198 ERC2
srip73415 chr3 59852903 59852903 + L1-Ta germline . no 198 FHIT
srip74429 chr3 80590163 80590163 - L1-Ta germline . no 198 .
srip74709 chr3 81990993 81990993 - L1-Ta germline . no 198 .
srip75678 chr3 85663354 85663354 - L1-Ta germline . no 198 CADM2
srip75906 chr3 89022346 89022346 - L1-Ta germline . no 198 .
srip76444 chr3 105316337 105316337 + L1-Ta germline . no 198 .
srip76621 chr3 109751770 109751770 + L1-Ta germline . no 198 .
srip76819 chr3 119046413 119046413 + L1-Ta germline . no 198 ARHGAP31
srip77283 chr3 123590726 123590726 + L1-Ta germline . no 198 MYLK
srip77894 chr3 139044441 139044441 + L1-Ta germline . no 198 .
srip78606 chr3 151148544 151148544 - L1-Ta germline . no 198 MED12L
srip78850 chr3 151688088 151688088 - L1-Ta germline . no 198 .
srip79327 chr3 162717306 162717306 + L1-Ta germline . no 198 .
srip79886 chr3 169269964 169269964 + L1-Ta germline . no 198 MECOM
srip80222 chr3 175677970 175677970 - L1-Ta germline . no 198 .
srip80402 chr3 176091333 176091333 + L1-Ta germline . no 198 .
srip81524 chr3 186372141 186372141 + L1-Ta germline . no 198 .
srip81652 chr3 187835309 187835309 - L1-Ta germline . no 198 .
srip82296 chr4 5667995 5667995 - L1-Ta germline . no 198 EVC2
srip82592 chr4 14849038 14849038 + L1-Ta germline . no 198 .
srip83351 chr4 20246382 20246382 + L1-Ta germline . no 198 .
srip83838 chr4 29321851 29321851 + L1-Ta germline . no 198 .
srip84890 chr4 47007790 47007790 - L1-Ta germline . no 198 .
srip86146 chr4 63090791 63090791 - L1-Ta germline . no 198 .
srip86203 chr4 66413932 66413932 + L1-Ta germline . no 198 EPHA5
srip86622 chr4 69572737 69572737 - L1-Ta germline . no 198 LOC728811
srip86983 chr4 71093301 71093301 + L1-Ta germline . no 198 C4orf7
srip88829 chr4 103343746 103343746 + L1-Ta germline . no 198 .
srip89600 chr4 110248316 110248316 - L1-Ta germline . no 198 .
srip89673 chr4 110248332 110248332 - L1-Ta germline . no 198 .
srip89997 chr4 112628973 112628973 + L1-Ta germline . no 198 .
srip90301 chr4 115132695 115132695 + L1-Ta germline . no 198 .
srip90703 chr4 118765255 118765255 + L1-Ta germline . no 198 .
srip90825 chr4 120717544 120717544 - L1-Ta germline . no 198 .
srip91230 chr4 128965442 128965442 - L1-Ta germline . no 198 .
srip92222 chr4 134596423 134596423 + L1-Ta germline . no 198 .
srip92779 chr4 138177325 138177325 + L1-Ta germline . no 198 .
srip93117 chr4 147225296 147225296 + L1-Ta germline . no 198 SLC10A7
srip93863 chr4 158907272 158907272 - L1-Ta germline . no 198 .
srip94422 chr4 169626245 169626245 - L1-Ta germline . no 198 PALLD
srip96912 chr5 21207732 21207732 + L1-Ta germline . no 198 .
srip96938 chr5 21899845 21899845 + L1-Ta germline . no 198 CDH12
srip96977 chr5 23070273 23070273 + L1-Ta germline . no 198 .
srip97225 chr5 26093140 26093140 + L1-Ta germline . no 198 .
srip97963 chr5 33633348 33633348 - L1-Ta germline . no 198 ADAMTS12
srip98036 chr5 33797544 33797544 - L1-Ta germline . no 198 ADAMTS12
srip98608 chr5 46396964 46396964 + L1-Ta germline . no 198 .
srip99680 chr5 73731035 73731035 + L1-Ta germline . no 198 .
srip100776 chr5 89450781 89450781 + L1-Ta germline . no 198 .
srip102260 chr5 109480258 109480258 - L1-Ta germline . no 198 .
srip102533 chr5 109567542 109567542 + L1-Ta germline . no 198 .
srip102703 chr5 112449703 112449703 - L1-Ta germline validated no 198 MCC
srip102754 chr5 113568828 113568828 - L1-Ta germline . no 198 .
srip102776 chr5 115449063 115449063 - L1-pre-Ta germline . no 198 COMMD10
srip103377 chr5 125040045 125040045 + L1-Ta germline . no 198 .
srip103765 chr5 137014775 137014775 - L1-Ta germline . no 198 KLHL3
srip103887 chr5 137130147 137130147 - L1-Ta germline . no 198 .
srip104842 chr5 154873933 154873933 - L1-Ta germline . no 198 .
srip105236 chr5 155619865 155619865 + L1-Ta germline . no 198 .
srip107091 chr6 13191033 13191033 + L1-Ta germline . no 198 PHACTR1
srip107551 chr6 13503049 13503049 + L1-Ta germline . no 198 .
srip107726 chr6 19258212 19258212 + L1-Ta germline . no 198 .
srip108090 chr6 32613444 32613444 + L1-Ta germline . no 198 .
srip108277 chr6 45852697 45852697 - L1-Ta germline . no 198 .
srip109187 chr6 61942547 61942547 - L1-Ta germline . no 198 .
srip109550 chr6 63368207 63368207 + L1-Ta germline . no 198 .
srip109961 chr6 68112755 68112755 - L1-Ta germline . no 198 .
srip110115 chr6 69198745 69198745 - L1-Ta germline . no 198 .
srip111079 chr6 77980650 77980650 - L1-Ta germline . no 198 .
srip111214 chr6 78649689 78649689 - L1-Ta germline . no 198 .
srip112183 chr6 91669521 91669521 - L1-Ta germline . no 198 .
srip113772 chr6 142450101 142450101 - L1-Ta germline . no 198 .
srip114731 chr6 148195789 148195789 + L1-Ta germline . no 198 .
srip114885 chr6 154215663 154215663 + L1-Ta germline . no 198 .
srip115559 chr6 162181257 162181257 + L1-Ta germline . no 198 PARK2
srip117487 chr7 52789472 52789472 + L1-Ta germline . no 198 .
srip117933 chr7 61079049 61079049 + L1-Ta germline . no 198 .
srip117968 chr7 61778308 61778308 - L1-Ta germline . no 198 .
srip118195 chr7 62492930 62492930 + L1-Ta germline . no 198 .
srip119861 chr7 84901724 84901724 - L1-Ta germline . no 198 .
srip120231 chr7 85044737 85044737 + L1-Ta germline . no 198 .
srip121163 chr7 106398050 106398050 - L1-Ta germline . no 198 .
srip121791 chr7 107829263 107829263 + L1-Ta germline . no 198 NRCAM
srip122250 chr7 110484749 110484749 + L1-Ta germline . no 198 IMMP2L
srip122301 chr7 111232935 111232935 - L1-Ta germline . no 198 .
srip122639 chr7 122124545 122124545 + L1-Ta germline . no 198 CADPS2
srip123129 chr7 134844920 134844920 + L1-Ta germline . no 198 TMEM140
srip124560 chr8 5829283 5829283 - L1-Ta germline . no 198 .
srip126922 chr8 67381885 67381885 - L1-Ta germline . no 198 .
srip127331 chr8 72399221 72399221 - L1-Ta germline . no 198 .
srip128242 chr8 87315040 87315040 + L1-Ta germline . no 198 .
srip128775 chr8 107557032 107557032 - L1-Ta germline . no 198 OXR1
srip129159 chr8 115788580 115788580 - L1-Ta germline . no 198 .
srip129669 chr8 119721703 119721703 - L1-Ta germline . no 198 SAMD12-AS1
srip130105 chr8 131041219 131041219 + L1-Ta germline . no 198 .
srip131141 chr9 6290494 6290494 + L1-Ta germline . no 198 .
srip133448 chr9 32463894 32463894 - L1-Ta germline . no 198 DDX58
srip133681 chr9 35883708 35883708 + L1-Ta germline . no 198 .
srip134687 chr9 100675534 100675534 - L1-Ta germline . no 198 C9orf156
srip135045 chr9 105073654 105073654 + L1-Ta germline . no 198 .
srip135989 chr9 118083880 118083880 - L1-Ta germline . no 198 DEC1
srip136162 chr9 136105857 136105857 - L1-Ta germline . no 198 .
srip136527 chrX 14152012 14152012 - L1-Ta germline . no 198 .
srip136794 chrX 29372132 29372132 + L1-Ta germline validated no 198 IL1RAPL1
srip137085 chrX 53798489 53798489 - L1-Ta germline . no 198 LOC100128454
srip141398 chrX 129525281 129525281 - L1-Ta germline . no 198 .