euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

219 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip847 chr1 56405398 56405398 - L1-Ta germline . no 196 LOC100507652
srip1564 chr1 69801795 69801795 + L1-Ta germline . no 196 .
srip2005 chr1 81855783 81855783 + L1-Ta germline . no 196 .
srip3072 chr1 102568923 102568923 + L1-Ta germline . no 196 .
srip3135 chr1 104646045 104646045 + L1-Ta germline . no 196 .
srip3594 chr1 112007827 112007827 + L1-Ta germline . no 196 .
srip3715 chr1 116980828 116980828 - L1-Ta germline . no 196 .
srip4039 chr1 149216797 149216797 + L1-Ta germline . no 196 .
srip5035 chr1 169524859 169524859 + L1-Ta germline . no 196 F5
srip5550 chr1 183969672 183969672 - L1-Ta germline . no 196 GLT25D2
srip5989 chr1 192262254 192262254 - L1-Ta germline . no 196 .
srip6014 chr1 192262268 192262268 - L1-Ta germline . no 196 .
srip6369 chr1 207579511 207579511 + L1-Ta germline . no 196 .
srip8001 chr10 19216652 19216652 + L1-Ta germline . no 196 .
srip8198 chr10 25576935 25576935 - L1-Ta germline . no 196 GPR158
srip9480 chr10 68178133 68178133 + L1-Ta germline . no 196 CTNNA3
srip9593 chr10 68949325 68949325 + L1-Ta germline . no 196 CTNNA3
srip9687 chr10 74767506 74767506 - L1-Ta germline . no 196 P4HA1
srip11208 chr10 110453470 110453470 + L1-Ta germline . no 196 .
srip11499 chr10 122662191 122662191 + L1-Ta germline . no 196 WDR11
srip11911 chr10 126983646 126983646 - L1-Ta germline . no 196 .
srip12729 chr11 24564755 24564755 - L1-Ta germline . no 196 LUZP2
srip12867 chr11 25123354 25123354 - L1-Ta germline . no 196 .
srip14362 chr11 41831811 41831811 - L1-Ta germline . no 196 .
srip14762 chr11 48360753 48360753 - L1-Ta germline . no 196 .
srip15354 chr11 58171838 58171838 + L1-Ta germline . no 196 .
srip17207 chr11 94684368 94684368 + L1-Ta germline . no 196 .
srip17766 chr11 104556130 104556130 - L1-Ta germline . no 196 .
srip18319 chr11 117195201 117195201 - L1-Ta germline . no 196 .
srip18567 chr11 128141113 128141113 + L1-Ta germline . no 196 .
srip18649 chr11 132682319 132682319 + L1-Ta germline . no 196 OPCML;LOC100128095
srip19320 chr11 134305648 134305648 - L1-Ta germline . no 196 .
srip20495 chr12 26588285 26588285 - L1-Ta germline . no 196 ITPR2
srip20716 chr12 28226413 28226413 - L1-Ta germline . no 196 .
srip22259 chr12 43256986 43256986 - L1-Ta germline . no 196 .
srip24429 chr12 84955216 84955216 - L1-Ta germline . no 196 .
srip25135 chr12 95808527 95808527 - L1-Ta germline . no 196 .
srip26006 chr12 118186926 118186926 + L1-Ta germline . no 196 KSR2
srip26354 chr12 126802929 126802929 - L1-Ta germline . no 196 .
srip26711 chr13 19620990 19620990 + L1-Ta germline . no 196 PHF2P1
srip26760 chr13 21817193 21817193 - L1-Ta germline . no 196 .
srip27484 chr13 27488126 27488126 + L1-Ta germline . no 196 .
srip28242 chr13 49521713 49521713 + L1-Ta germline . no 196 .
srip29051 chr13 61462336 61462336 - L1-Ta germline . no 196 .
srip31023 chr13 79259793 79259793 - L1-Ta germline . no 196 .
srip31429 chr13 85871602 85871602 - L1-Ta germline . no 196 .
srip33498 chr13 104296223 104296223 - L1-Ta germline . no 196 .
srip33655 chr13 104395943 104395943 - L1-Ta germline . no 196 .
srip33797 chr13 105280146 105280146 - L1-Ta germline . no 196 .
srip33811 chr13 106256352 106256352 - L1-Ta germline . no 196 .
srip34592 chr14 26787480 26787480 - L1-Ta germline . no 196 .
srip35266 chr14 28545328 28545328 - L1-Ta germline . no 196 .
srip35364 chr14 30854668 30854668 + L1-Ta germline . no 196 .
srip35570 chr14 34140125 34140125 - L1-Ta germline . no 196 NPAS3
srip37856 chr14 67419863 67419863 - L1-Ta germline . no 196 GPHN
srip37950 chr14 68784244 68784244 + L1-Ta germline . no 196 RAD51B
srip39509 chr15 34031839 34031839 - L1-Ta germline . no 196 RYR3
srip39925 chr15 46304802 46304802 + L1-Ta germline . no 196 .
srip40215 chr15 47507329 47507329 - L1-Ta germline . no 196 SEMA6D
srip40735 chr15 51843819 51843819 + L1-Ta germline . no 196 DMXL2
srip41021 chr15 55129551 55129551 + L1-Ta germline . no 196 .
srip41249 chr15 56251153 56251153 + L1-Ta germline . no 196 NEDD4
srip41690 chr15 61756190 61756190 + L1-Ta germline . no 196 .
srip43053 chr15 98622504 98622504 + L1-Ta germline . no 196 .
srip43401 chr15 100931161 100931161 - L1-Ta germline . no 196 .
srip44777 chr16 32523893 32523893 - L1-Ta germline . no 196 .
srip45060 chr16 32525611 32525611 - L1-Ta germline . no 196 .
srip45526 chr16 34001600 34001600 + L1-Ta germline . no 196 .
srip45875 chr16 61079188 61079188 + L1-Ta germline . no 196 .
srip45894 chr16 62491608 62491608 - L1-Ta germline . no 196 .
srip47362 chr17 28398313 28398313 + L1-Ta germline . no 196 EFCAB5
srip49229 chr18 27219200 27219200 - L1-Ta germline . no 196 .
srip50347 chr18 51425726 51425726 - L1-Ta germline . no 196 .
srip50403 chr18 51488332 51488332 - L1-Ta germline . no 196 .
srip50719 chr18 51762730 51762730 - L1-Ta germline . no 196 .
srip51183 chr18 63161480 63161480 + L1-Ta germline . no 196 .
srip51244 chr18 64979039 64979039 + L1-Ta germline . no 196 .
srip52444 chr19 45444699 45444699 + L1-Ta germline . no 196 .
srip52770 chr2 6798288 6798288 - L1-Ta germline . no 196 .
srip53950 chr2 35879359 35879359 + L1-Ta germline . no 196 .
srip54221 chr2 36570243 36570243 - L1-Ta germline . no 196 .
srip54600 chr2 42051403 42051403 + L1-Ta germline . no 196 .
srip54922 chr2 53460052 53460052 + L1-Ta germline . no 196 .
srip56243 chr2 82098043 82098043 + L1-Ta germline . no 196 .
srip56502 chr2 83188325 83188325 + L1-Ta germline . no 196 .
srip57818 chr2 132868182 132868182 - L1-Ta germline . no 196 .
srip60138 chr2 178676245 178676245 - L1-Ta germline . no 196 PDE11A
srip61921 chr2 221278223 221278223 - L1-Ta germline . no 196 .
srip62736 chr20 1231070 1231070 - L1-Ta germline . no 196 RAD21L1
srip63196 chr20 9477925 9477925 - L1-Ta germline . no 196 .
srip63932 chr20 22501649 22501649 + L1-Ta germline . no 196 .
srip64800 chr20 41952105 41952105 - L1-Ta germline . no 196 .
srip66260 chr21 23626191 23626191 - L1-Ta germline . no 196 .
srip66870 chr21 29069171 29069171 + L1-Ta germline . no 196 .
srip67887 chr22 26507199 26507199 - L1-Ta germline . no 196 .
srip69640 chr3 656435 656435 - L1-Ta germline . no 196 .
srip70027 chr3 6752728 6752728 - L1-Ta germline . no 196 .
srip70074 chr3 17409573 17409573 - L1-Ta germline . no 196 TBC1D5
srip70450 chr3 20748896 20748896 - L1-Ta germline . no 196 .
srip71166 chr3 26524464 26524464 - L1-Ta germline . no 196 .
srip71926 chr3 38626082 38626082 + L1-Ta germline . no 196 SCN5A
srip72745 chr3 55788580 55788580 + L1-Ta germline . no 196 ERC2
srip73413 chr3 59852903 59852903 + L1-Ta germline . no 196 FHIT
srip73536 chr3 69181542 69181542 - L1-Ta germline . no 196 .
srip74427 chr3 80590163 80590163 - L1-Ta germline . no 196 .
srip74848 chr3 82144854 82144854 - L1-Ta germline . no 196 .
srip75677 chr3 85663354 85663354 - L1-Ta germline . no 196 CADM2
srip76442 chr3 105316337 105316337 + L1-Ta germline . no 196 .
srip76619 chr3 109751770 109751770 + L1-Ta germline . no 196 .
srip76818 chr3 119046413 119046413 + L1-Ta germline . no 196 ARHGAP31
srip77281 chr3 123590726 123590726 + L1-Ta germline . no 196 MYLK
srip78278 chr3 144610072 144610072 - L1-Ta germline . no 196 .
srip78604 chr3 151148544 151148544 - L1-Ta germline . no 196 MED12L
srip79326 chr3 162717306 162717306 + L1-Ta germline . no 196 .
srip79467 chr3 166092231 166092231 + L1-Ta germline . no 196 .
srip80400 chr3 176091333 176091333 + L1-Ta germline . no 196 .
srip80452 chr3 180091672 180091672 + L1-Ta germline . no 196 .
srip80891 chr3 181689145 181689145 - L1-Ta germline . no 196 .
srip81522 chr3 186372141 186372141 + L1-Ta germline . no 196 .
srip81650 chr3 187835309 187835309 - L1-Ta germline . no 196 .
srip82135 chr3 193354175 193354175 - L1-Ta germline . no 196 OPA1
srip82450 chr4 13086506 13086506 - L1-Ta germline . no 196 .
srip83349 chr4 20246382 20246382 + L1-Ta germline . no 196 .
srip84888 chr4 47007790 47007790 - L1-Ta germline . no 196 .
srip85454 chr4 57497067 57497067 - L1-Ta germline . no 196 .
srip85826 chr4 58917529 58917529 - L1-Ta germline . no 196 .
srip86201 chr4 66413932 66413932 + L1-Ta germline . no 196 EPHA5
srip87709 chr4 82921896 82921896 + L1-Ta germline . no 196 .
srip88827 chr4 103343746 103343746 + L1-Ta germline . no 196 .
srip89598 chr4 110248316 110248316 - L1-Ta germline . no 196 .
srip89671 chr4 110248332 110248332 - L1-Ta germline . no 196 .
srip89995 chr4 112628973 112628973 + L1-Ta germline . no 196 .
srip90019 chr4 113909989 113909989 - L1-Ta germline . no 196 ANK2
srip90299 chr4 115132695 115132695 + L1-Ta germline . no 196 .
srip92777 chr4 138177325 138177325 + L1-Ta germline . no 196 .
srip92919 chr4 146927741 146927741 - L1-Ta germline . no 196 .
srip93115 chr4 147225296 147225296 + L1-Ta germline . no 196 SLC10A7
srip94040 chr4 165231730 165231730 - L1-Ta germline . no 196 MARCH1
srip95075 chr4 182418058 182418058 - L1-Ta germline . no 196 .
srip95476 chr5 1645773 1645773 + L1-Ta germline . no 196 .
srip96364 chr5 11391276 11391276 + L1-Ta germline . no 196 CTNND2
srip96910 chr5 21207732 21207732 + L1-Ta germline . no 196 .
srip97223 chr5 26093140 26093140 + L1-Ta germline . no 196 .
srip97961 chr5 33633348 33633348 - L1-Ta germline . no 196 ADAMTS12
srip98360 chr5 41602028 41602028 + L1-Ta germline . no 196 .
srip98607 chr5 46396964 46396964 + L1-Ta germline . no 196 .
srip99047 chr5 53630865 53630865 + L1-Ta germline validated no 196 .
srip99112 chr5 57279517 57279517 + L1-Ta germline . no 196 .
srip99764 chr5 83619783 83619783 - L1-Ta germline . no 196 EDIL3
srip100085 chr5 84239673 84239673 - L1-Ta germline . no 196 .
srip100774 chr5 89450781 89450781 + L1-Ta germline . no 196 .
srip101067 chr5 96866407 96866407 + L1-Ta germline . no 196 .
srip102258 chr5 109480258 109480258 - L1-Ta germline . no 196 .
srip102531 chr5 109567542 109567542 + L1-Ta germline . no 196 .
srip102774 chr5 115449063 115449063 - L1-pre-Ta germline . no 196 COMMD10
srip103539 chr5 132934086 132934086 + L1-Ta germline . no 196 FSTL4
srip105234 chr5 155619865 155619865 + L1-Ta germline . no 196 .
srip105807 chr5 164495144 164495144 - L1-Ta germline . no 196 LOC100507193
srip107549 chr6 13503049 13503049 + L1-Ta germline . no 196 .
srip108275 chr6 45852697 45852697 - L1-Ta germline . no 196 .
srip108669 chr6 46310291 46310291 + L1-Ta germline . no 196 .
srip108815 chr6 51614263 51614263 + L1-Ta germline . no 196 PKHD1
srip108956 chr6 56729315 56729315 - L1-Ta germline . no 196 LOC100652827
srip108979 chr6 57309681 57309681 - L1-pre-Ta germline . no 196 PRIM2
srip109959 chr6 68112755 68112755 - L1-Ta germline . no 196 .
srip109983 chr6 68132365 68132365 - L1-Ta germline validated no 196 .
srip110113 chr6 69198745 69198745 - L1-Ta germline . no 196 .
srip111212 chr6 78649689 78649689 - L1-Ta germline . no 196 .
srip112181 chr6 91669521 91669521 - L1-Ta germline . no 196 .
srip112290 chr6 91767655 91767655 + L1-Ta germline . no 196 .
srip112325 chr6 94023141 94023141 - L1-Ta germline . no 196 EPHA7
srip112358 chr6 94263991 94263991 + L1-Ta germline . no 196 .
srip112375 chr6 97541554 97541554 - L1-Ta germline . no 196 KLHL32
srip112836 chr6 105619607 105619607 + L1-Ta germline . no 196 POPDC3
srip113018 chr6 114091140 114091140 + L1-Ta germline . no 196 LOC100652953
srip113770 chr6 142450101 142450101 - L1-Ta germline . no 196 .
srip114883 chr6 154215663 154215663 + L1-Ta germline . no 196 .
srip115078 chr6 157968737 157968737 - L1-Ta germline . no 196 ZDHHC14
srip115557 chr6 162181257 162181257 + L1-Ta germline . no 196 PARK2
srip116247 chr7 12377013 12377013 + L1-Ta germline . no 196 VWDE
srip116415 chr7 20170322 20170322 + L1-Ta germline . no 196 .
srip117067 chr7 43256726 43256726 - L1-Ta germline . no 196 HECW1
srip117485 chr7 52789472 52789472 + L1-Ta germline . no 196 .
srip117614 chr7 53652502 53652502 - L1-Ta germline . no 196 .
srip117966 chr7 61778308 61778308 - L1-Ta germline . no 196 .
srip118193 chr7 62492930 62492930 + L1-Ta germline . no 196 .
srip119859 chr7 84901724 84901724 - L1-Ta germline . no 196 .
srip120229 chr7 85044737 85044737 + L1-Ta germline . no 196 .
srip120381 chr7 86719213 86719213 - L1-Ta germline . no 196 .
srip122248 chr7 110484749 110484749 + L1-Ta germline . no 196 IMMP2L
srip122299 chr7 111232935 111232935 - L1-Ta germline . no 196 .
srip122690 chr7 124451334 124451334 - L1-Ta germline . no 196 .
srip123413 chr7 144908637 144908637 - L1-Ta germline . no 196 .
srip123420 chr7 144908830 144908830 + L1-Ta germline . no 196 .
srip125655 chr8 29056587 29056587 - L1-Ta germline . no 196 KIF13B
srip126920 chr8 67381885 67381885 - L1-Ta germline . no 196 .
srip127329 chr8 72399221 72399221 - L1-Ta germline . no 196 .
srip128240 chr8 87315040 87315040 + L1-Ta germline . no 196 .
srip128773 chr8 107557032 107557032 - L1-Ta germline . no 196 OXR1
srip129157 chr8 115788580 115788580 - L1-Ta germline . no 196 .
srip131139 chr9 6290494 6290494 + L1-Ta germline . no 196 .
srip131543 chr9 9236600 9236600 + L1-Ta germline . no 196 PTPRD
srip132404 chr9 30495887 30495887 - L1-Ta germline . no 196 .
srip132625 chr9 30674468 30674468 - L1-Ta germline . no 196 .
srip133446 chr9 32463894 32463894 - L1-Ta germline . no 196 DDX58
srip133679 chr9 35883708 35883708 + L1-Ta germline . no 196 .
srip133830 chr9 68420861 68420861 - L1-Ta germline . no 196 .
srip133924 chr9 72318364 72318364 - L1-Ta germline . no 196 .
srip133997 chr9 73584446 73584446 + L1-Ta germline . no 196 TRPM3
srip134081 chr9 77727357 77727357 - L1-Ta germline . no 196 OSTF1
srip136317 chrX 11628376 11628376 - L1-Ta germline . no 196 ARHGAP6
srip136811 chrX 31483112 31483112 - L1-Ta germline . no 196 DMD
srip140448 chrX 111557750 111557750 - L1-Ta germline . no 196 ZCCHC16
srip141112 chrX 123611800 123611800 + L1-Ta germline . no 196 ODZ1
srip141131 chrX 123612276 123612276 - L1-Ta germline . no 196 ODZ1
srip141396 chrX 129525281 129525281 - L1-Ta germline . no 196 .
srip141476 chrX 130495439 130495439 - L1-Ta germline . no 196 .
srip141964 chrX 140515258 140515258 - L1-Ta germline . no 196 .
srip142220 chrY 9951878 9951878 - L1-pre-Ta germline . no 196 .