euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

204 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip511 chr1 42483961 42483961 + L1-Ta germline . no 194 HIVEP3
srip2003 chr1 81855783 81855783 + L1-Ta germline . no 194 .
srip2462 chr1 95801843 95801843 - L1-Ta germline . no 194 .
srip3070 chr1 102568923 102568923 + L1-Ta germline . no 194 .
srip3928 chr1 121354774 121354774 + L1-Ta germline . no 194 .
srip4038 chr1 149216797 149216797 + L1-Ta germline . no 194 .
srip5413 chr1 179575362 179575362 - L1-Ta germline . no 194 TDRD5
srip6367 chr1 207579511 207579511 + L1-Ta germline . no 194 .
srip7252 chr1 241262724 241262724 - L1-pre-Ta germline . no 194 RGS7
srip7405 chr1 242311577 242311577 + L1-Ta germline validated no 194 PLD5
srip7692 chr10 9525646 9525646 + L1-Ta germline . no 194 .
srip8422 chr10 25707687 25707687 - L1-Ta germline . no 194 GPR158
srip9591 chr10 68949325 68949325 + L1-Ta germline . no 194 CTNNA3
srip9686 chr10 74767506 74767506 - L1-Ta germline . no 194 P4HA1
srip11206 chr10 110453470 110453470 + L1-Ta germline . no 194 .
srip11963 chr10 131468402 131468402 - L1-Ta germline . no 194 MGMT
srip13791 chr11 33670123 33670123 + L1-Ta germline . no 194 C11orf41
srip13904 chr11 37666899 37666899 + L1-Ta germline . no 194 .
srip14360 chr11 41831811 41831811 - L1-Ta germline . no 194 .
srip14760 chr11 48360753 48360753 - L1-Ta germline . no 194 .
srip15352 chr11 58171838 58171838 + L1-Ta germline . no 194 .
srip17205 chr11 94684368 94684368 + L1-Ta germline . no 194 .
srip17764 chr11 104556130 104556130 - L1-Ta germline . no 194 .
srip18041 chr11 110377879 110377879 - L1-Ta germline . no 194 .
srip18520 chr11 123241794 123241794 + L1-Ta germline . no 194 .
srip19318 chr11 134305648 134305648 - L1-Ta germline . no 194 .
srip20973 chr12 33325793 33325793 - L1-Ta germline . no 194 .
srip21161 chr12 34017325 34017325 - L1-Ta germline . no 194 .
srip22257 chr12 43256986 43256986 - L1-Ta germline . no 194 .
srip24914 chr12 85506290 85506290 + L1-Ta germline . no 194 LRRIQ1
srip25133 chr12 95808527 95808527 - L1-Ta germline . no 194 .
srip25641 chr12 117814447 117814447 - L1-Ta germline . no 194 .
srip26004 chr12 118186926 118186926 + L1-Ta germline . no 194 KSR2
srip27013 chr13 22489805 22489805 + L1-Ta germline . no 194 .
srip28015 chr13 42771403 42771403 + L1-Ta germline . no 194 DGKH
srip28170 chr13 48856541 48856541 + L1-Ta germline . no 194 .
srip28445 chr13 58900908 58900908 + L1-Ta germline . no 194 .
srip29049 chr13 61462336 61462336 - L1-Ta germline . no 194 .
srip29621 chr13 61734485 61734485 + L1-Ta germline . no 194 .
srip31021 chr13 79259793 79259793 - L1-Ta germline . no 194 .
srip31427 chr13 85871602 85871602 - L1-Ta germline . no 194 .
srip32396 chr13 91626223 91626223 + L1-Ta germline . no 194 .
srip33496 chr13 104296223 104296223 - L1-Ta germline . no 194 .
srip33653 chr13 104395943 104395943 - L1-Ta germline . no 194 .
srip33795 chr13 105280146 105280146 - L1-Ta germline . no 194 .
srip34287 chr14 19000969 19000969 + L1-Ta germline . no 194 .
srip35249 chr14 28301261 28301261 + L1-Ta germline . no 194 .
srip35568 chr14 34140125 34140125 - L1-Ta germline . no 194 NPAS3
srip36032 chr14 36674760 36674760 + L1-Ta germline . no 194 .
srip36297 chr14 39875084 39875084 + L1-Ta germline . no 194 FBXO33
srip37152 chr14 52667758 52667758 - L1-Ta germline . no 194 .
srip37401 chr14 59522426 59522426 - L1-Ta germline . no 194 .
srip38154 chr14 71197799 71197799 + L1-Ta germline . no 194 MAP3K9
srip38610 chr14 86381796 86381796 - L1-Ta germline . no 194 .
srip41247 chr15 56251153 56251153 + L1-Ta germline . no 194 NEDD4
srip41698 chr15 62064901 62064901 + L1-Ta germline . no 194 .
srip41721 chr15 62169638 62169638 - L1-Ta germline . no 194 VPS13C
srip43051 chr15 98622504 98622504 + L1-Ta germline . no 194 .
srip43399 chr15 100931161 100931161 - L1-Ta germline . no 194 .
srip43642 chr16 6793831 6793831 + L1-Ta germline . no 194 RBFOX1
srip44081 chr16 17755305 17755305 - L1-Ta germline . no 194 .
srip44776 chr16 32523893 32523893 - L1-Ta germline . no 194 .
srip45058 chr16 32525611 32525611 - L1-Ta germline . no 194 .
srip45483 chr16 33992430 33992430 + L1-Ta germline . no 194 .
srip45873 chr16 61079188 61079188 + L1-Ta germline . no 194 .
srip46393 chr16 76865776 76865776 - L1-Ta germline . no 194 .
srip47360 chr17 28398313 28398313 + L1-Ta germline . no 194 EFCAB5
srip47586 chr17 32813605 32813605 + L1-Ta germline . no 194 .
srip48441 chr17 68357409 68357409 + L1-Ta germline . no 194 .
srip50006 chr18 49216219 49216219 - L1-Ta germline . no 194 .
srip50345 chr18 51425726 51425726 - L1-Ta germline . no 194 .
srip51671 chr18 74515287 74515287 - L1-Ta germline . no 194 LOC100131655
srip52769 chr2 6798288 6798288 - L1-Ta germline . no 194 .
srip54219 chr2 36570243 36570243 - L1-Ta germline . no 194 .
srip56241 chr2 82098043 82098043 + L1-Ta germline . no 194 .
srip56759 chr2 102912450 102912450 + L1-Ta germline . no 194 .
srip57433 chr2 119363768 119363768 + L1-Ta germline validated no 194 .
srip57816 chr2 132868182 132868182 - L1-Ta germline . no 194 .
srip58214 chr2 141852908 141852908 - L1-Ta germline . no 194 LRP1B
srip58577 chr2 144010793 144010793 + L1-Ta germline . no 194 ARHGAP15
srip59851 chr2 170504673 170504673 + L1-Ta germline . no 194 C2orf77
srip60136 chr2 178676245 178676245 - L1-Ta germline . no 194 PDE11A
srip60490 chr2 181000540 181000540 + L1-Ta germline . no 194 .
srip61247 chr2 201638085 201638085 + L1-Ta germline . no 194 AOX2P
srip62171 chr2 221503768 221503768 - L1-Ta germline . no 194 .
srip62618 chr2 235519794 235519794 + L1-Ta germline . no 194 .
srip63089 chr20 7292200 7292200 + L1-Ta germline . no 194 .
srip63194 chr20 9477925 9477925 - L1-Ta germline . no 194 .
srip63445 chr20 16479495 16479495 - L1-Ta germline . no 194 KIF16B
srip64010 chr20 25844027 25844027 + L1-Ta germline . no 194 .
srip64798 chr20 41952105 41952105 - L1-Ta germline . no 194 .
srip65336 chr20 60132832 60132832 - L1-Ta germline . no 194 CDH4
srip66034 chr21 19517313 19517313 - L1-Ta germline . no 194 .
srip66172 chr21 23257888 23257888 - L1-Ta germline . no 194 .
srip66868 chr21 29069171 29069171 + L1-Ta germline . no 194 .
srip67834 chr22 22715588 22715588 + L1-Ta germline . no 194 IGL@
srip67904 chr22 28455902 28455902 - L1-Ta germline . no 194 TTC28
srip68283 chr22 39308481 39308481 + L1-Ta germline . no 194 .
srip68900 chr22 44324605 44324605 - L1-Ta germline . no 194 PNPLA3
srip69639 chr3 656435 656435 - L1-Ta germline . no 194 .
srip70072 chr3 17409573 17409573 - L1-Ta germline . no 194 TBC1D5
srip70448 chr3 20748896 20748896 - L1-Ta germline . no 194 .
srip70803 chr3 24987874 24987874 - L1-Ta germline . no 194 .
srip71164 chr3 26524464 26524464 - L1-Ta germline . no 194 .
srip73783 chr3 75101216 75101216 + L1-Ta germline . no 194 .
srip74846 chr3 82144854 82144854 - L1-Ta germline . no 194 .
srip75091 chr3 84433395 84433395 + L1-Ta germline . no 194 .
srip75611 chr3 85576568 85576568 + L1-Ta germline . no 194 CADM2
srip76212 chr3 101279657 101279657 + L1-Ta germline . no 194 .
srip76440 chr3 105316337 105316337 + L1-Ta germline . no 194 .
srip76618 chr3 109751770 109751770 + L1-Ta germline . no 194 .
srip76817 chr3 119046413 119046413 + L1-Ta germline . no 194 ARHGAP31
srip77279 chr3 123590726 123590726 + L1-Ta germline . no 194 MYLK
srip78602 chr3 151148544 151148544 - L1-Ta germline . no 194 MED12L
srip79324 chr3 162717306 162717306 + L1-Ta germline . no 194 .
srip79682 chr3 169078079 169078079 + L1-Ta germline . no 194 MECOM
srip79943 chr3 172749118 172749118 - L1-Ta germline . no 194 SPATA16
srip80398 chr3 176091333 176091333 + L1-Ta germline . no 194 .
srip81520 chr3 186372141 186372141 + L1-Ta germline . no 194 .
srip81648 chr3 187835309 187835309 - L1-Ta germline . no 194 .
srip83347 chr4 20246382 20246382 + L1-Ta germline . no 194 .
srip84886 chr4 47007790 47007790 - L1-Ta germline . no 194 .
srip86137 chr4 61999375 61999375 + L1-Ta germline . no 194 .
srip86981 chr4 71093301 71093301 + L1-Ta germline . no 194 C4orf7
srip89023 chr4 104214686 104214686 + L1-Ta germline . no 194 .
srip90297 chr4 115132695 115132695 + L1-Ta germline . no 194 .
srip91588 chr4 132181648 132181648 - L1-Ta germline . no 194 .
srip92775 chr4 138177325 138177325 + L1-Ta germline . no 194 .
srip93113 chr4 147225296 147225296 + L1-Ta germline . no 194 SLC10A7
srip93379 chr4 152732810 152732810 - L1-Ta germline . no 194 .
srip93746 chr4 157447970 157447970 + L1-Ta germline . no 194 .
srip94038 chr4 165231730 165231730 - L1-Ta germline . no 194 MARCH1
srip95370 chr4 190659695 190659695 + L1-Ta germline . no 194 .
srip97221 chr5 26093140 26093140 + L1-Ta germline . no 194 .
srip97959 chr5 33633348 33633348 - L1-Ta germline . no 194 ADAMTS12
srip98034 chr5 33797544 33797544 - L1-Ta germline . no 194 ADAMTS12
srip98358 chr5 41602028 41602028 + L1-Ta germline . no 194 .
srip98606 chr5 46396964 46396964 + L1-Ta germline . no 194 .
srip100083 chr5 84239673 84239673 - L1-Ta germline . no 194 .
srip100772 chr5 89450781 89450781 + L1-Ta germline . no 194 .
srip102256 chr5 109480258 109480258 - L1-Ta germline . no 194 .
srip102784 chr5 116758570 116758570 - L1-Ta germline . no 194 .
srip104840 chr5 154873933 154873933 - L1-Ta germline . no 194 .
srip105232 chr5 155619865 155619865 + L1-Ta germline . no 194 .
srip105578 chr5 159351199 159351199 - L1-Ta germline . no 194 ADRA1B
srip105724 chr5 160435665 160435665 - L1-Ta germline . no 194 .
srip107088 chr6 13191033 13191033 + L1-Ta germline . no 194 PHACTR1
srip107547 chr6 13503049 13503049 + L1-Ta germline . no 194 .
srip107947 chr6 32457289 32457289 + L1-Ta germline . no 194 .
srip108013 chr6 32509106 32509106 - L1-Ta germline . no 194 .
srip108072 chr6 32589567 32589567 + L1-Ta germline . no 194 .
srip109957 chr6 68112755 68112755 - L1-Ta germline . no 194 .
srip110112 chr6 69198745 69198745 - L1-Ta germline . no 194 .
srip110520 chr6 74935590 74935590 - L1-Ta germline . no 194 .
srip111077 chr6 77980650 77980650 - L1-Ta germline . no 194 .
srip111210 chr6 78649689 78649689 - L1-Ta germline . no 194 .
srip111301 chr6 81293578 81293578 - L1-Ta germline . no 194 .
srip112179 chr6 91669521 91669521 - L1-Ta germline . no 194 .
srip112288 chr6 91767655 91767655 + L1-Ta germline . no 194 .
srip112797 chr6 102846086 102846086 - L1-Ta germline . no 194 .
srip113768 chr6 142450101 142450101 - L1-Ta germline . no 194 .
srip114881 chr6 154215663 154215663 + L1-Ta germline . no 194 .
srip115076 chr6 157968737 157968737 - L1-Ta germline . no 194 ZDHHC14
srip115555 chr6 162181257 162181257 + L1-Ta germline . no 194 PARK2
srip116252 chr7 12725153 12725153 + L1-Ta germline . no 194 .
srip117932 chr7 61079049 61079049 + L1-Ta germline . no 194 .
srip117964 chr7 61778308 61778308 - L1-Ta germline . no 194 .
srip118191 chr7 62492930 62492930 + L1-Ta germline . no 194 .
srip118871 chr7 70188676 70188676 - L1-Ta germline . no 194 AUTS2
srip119857 chr7 84901724 84901724 - L1-Ta germline . no 194 .
srip120227 chr7 85044737 85044737 + L1-Ta germline . no 194 .
srip121789 chr7 107829263 107829263 + L1-Ta germline . no 194 NRCAM
srip121988 chr7 108325661 108325661 + L1-Ta germline . no 194 .
srip122462 chr7 112789623 112789623 - L1-Ta germline . no 194 .
srip122971 chr7 127930866 127930866 - L1-Ta germline . no 194 .
srip123345 chr7 142818667 142818667 + L1-Ta germline . no 194 .
srip124042 chr8 4452894 4452894 - L1-Ta germline . no 194 CSMD1
srip124558 chr8 5829283 5829283 - L1-Ta germline . no 194 .
srip125419 chr8 24926545 24926545 - L1-Ta germline . no 194 .
srip126918 chr8 67381885 67381885 - L1-Ta germline . no 194 .
srip127327 chr8 72399221 72399221 - L1-Ta germline . no 194 .
srip128238 chr8 87315040 87315040 + L1-Ta germline . no 194 .
srip128771 chr8 107557032 107557032 - L1-Ta germline . no 194 OXR1
srip128849 chr8 111632621 111632621 + L1-Ta germline . no 194 .
srip129667 chr8 119721703 119721703 - L1-Ta germline . no 194 SAMD12-AS1
srip130103 chr8 131041219 131041219 + L1-Ta germline . no 194 .
srip130351 chr8 134972242 134972242 + L1-pre-Ta germline . no 194 .
srip131137 chr9 6290494 6290494 + L1-Ta germline . no 194 .
srip133444 chr9 32463894 32463894 - L1-Ta germline . no 194 DDX58
srip133677 chr9 35883708 35883708 + L1-Ta germline . no 194 .
srip133954 chr9 72777411 72777411 - L1-Ta germline . no 194 LOC100507244;MAMDC2
srip133995 chr9 73521475 73521475 - L1-Ta germline . no 194 TRPM3
srip134685 chr9 100675534 100675534 - L1-Ta germline . no 194 C9orf156
srip135043 chr9 105073654 105073654 + L1-Ta germline . no 194 .
srip135986 chr9 118083880 118083880 - L1-Ta germline . no 194 DEC1
srip136160 chr9 136105857 136105857 - L1-Ta germline . no 194 .
srip136775 chrX 24384651 24384651 - L1-Ta germline . no 194 .
srip137084 chrX 53798489 53798489 - L1-Ta germline . no 194 LOC100128454
srip137340 chrX 55264652 55264652 - L1-Ta germline . no 194 .
srip137589 chrX 55585160 55585160 - L1-Ta germline . no 194 .
srip138337 chrX 66982754 66982754 - L1-Ta germline . no 194 .
srip141098 chrX 123230117 123230117 - L1-Ta germline . no 194 STAG2
srip141475 chrX 130495439 130495439 - L1-Ta germline . no 194 .
srip142218 chrY 9951878 9951878 - L1-pre-Ta germline . no 194 .